PLAZA 3.0 Dicots : Binding Sites

Gene families associated with a binding site

All is shown and individual cells refer to the target genes (per species).

Binding site: Motif_518
Name: SPHCOREZMC1
Description: Core of Sph element; Core motif of Sph element in maize C1 gene to which maize VP1 (viviparous 1) protein binds; VP1-responsive element; see RYREPEAT4; VP1 gene is specifically required for expression of the maturation program in seed development; VP1 is a novel transcription factor possibly involved in potentiation of a seed-specific hormone response

#Associated genes: 238
#Associated gene families: 116

Click table-header(s) to enable sorting

gene family	#genes (in total)	#associated genes	species	aly	ath	atr	bra	bvu	cla	cme	cpa	cre	cru	csi	egr	fve	gma	gra	lja	mdo	mes	mtr	olu	osa	ppa	ppe	ptr	rco	sly	stu	tca	tpa	vvi	zma
HOM03D000006	4746	5	31	109	98	110	148	109	92	93	87	13	108	236	311	151	290	205	84	422	150	249	4	173	110	186	252	121	134	183	139	89	152	138
HOM03D000007	4579	2	29	124	134	36	177	83	55	74	55	0	148	181	480	134	258	137	43	457	140	281	0	161	2	188	346	97	119	166	144	79	172	108
HOM03D000008	3494	2	30	112	110	55	200	46	86	43	80	1	113	87	150	96	278	184	55	235	164	147	0	101	37	104	171	110	118	125	110	108	118	150
HOM03D000012	2924	3	31	78	71	94	113	66	55	27	55	3	79	108	175	92	198	139	60	199	108	137	5	78	51	94	124	96	116	161	87	65	111	79
HOM03D000015	2743	3	29	87	92	43	172	45	67	74	68	0	95	95	149	84	163	140	57	184	110	87	0	105	32	86	139	78	69	79	88	79	67	109
HOM03D000019	2243	1	30	77	83	51	112	53	50	51	51	1	84	62	82	74	159	74	43	121	68	119	0	60	48	77	124	79	80	90	65	75	70	60
HOM03D000023	2177	1	29	76	55	104	68	42	45	53	63	0	52	69	73	59	127	68	35	188	71	135	0	64	21	65	88	77	97	126	61	52	88	55
HOM03D000029	1996	2	31	58	57	30	120	37	51	55	45	1	56	46	69	44	160	106	39	132	94	90	1	63	33	52	92	54	73	84	49	58	53	94
HOM03D000030	1986	2	29	71	67	50	111	45	53	56	45	0	77	57	34	61	132	82	41	130	86	113	0	44	48	74	90	60	75	87	44	63	49	41
HOM03D000042	1637	1	29	49	47	37	75	59	39	38	42	0	44	50	58	43	128	74	27	90	59	77	0	68	17	52	65	46	76	80	48	44	45	60
HOM03D000045	1603	2	29	37	34	46	50	28	37	37	43	0	35	44	84	50	116	73	32	113	72	71	0	60	44	47	95	47	52	57	42	32	40	85
HOM03D000047	1516	1	30	55	39	37	81	30	48	39	33	3	57	40	55	66	80	63	25	112	52	75	0	55	22	67	73	39	44	51	50	38	32	55
HOM03D000066	1292	1	31	43	41	24	67	31	31	30	31	18	38	35	40	31	79	63	20	78	54	43	9	49	23	37	60	34	53	61	34	38	39	58
HOM03D000073	1206	3	30	34	35	19	59	32	33	39	27	5	38	33	43	32	82	50	15	76	42	45	0	58	45	28	39	26	40	44	29	33	31	94
HOM03D000074	1202	1	31	60	48	28	80	22	26	24	28	2	45	23	32	32	72	28	16	118	61	59	1	39	17	76	48	28	24	27	29	37	41	31
HOM03D000082	1106	1	29	37	33	33	52	30	32	32	23	0	35	30	40	33	81	41	26	55	39	44	0	30	36	29	43	52	38	44	36	31	36	35
HOM03D000086	1066	1	29	30	32	29	49	25	28	30	38	0	31	27	38	26	74	53	13	93	43	43	0	29	27	27	45	26	36	42	30	32	28	42
HOM03D000094	1037	7	22	2	3	0	1	0	0	0	0	0	56	3	0	25	282	3	27	47	1	322	0	8	3	11	27	3	88	68	16	37	0	4
HOM03D000095	1031	6	31	33	36	18	76	21	37	36	21	1	35	24	26	24	80	60	13	58	44	42	2	32	19	28	45	23	33	35	25	36	22	46
HOM03D000096	1015	10	31	34	26	23	53	18	26	26	25	1	30	26	29	26	71	49	16	57	41	36	1	37	44	29	53	30	41	33	31	29	32	42
HOM03D000097	1012	1	29	26	33	26	48	22	26	26	24	0	34	26	28	29	78	44	16	87	41	40	0	39	41	24	42	25	33	35	25	34	26	34
HOM03D000107	925	1	31	25	28	21	49	14	25	28	27	2	25	23	30	26	91	43	22	39	35	52	2	38	8	24	39	21	39	36	23	23	23	44
HOM03D000108	887	1	29	32	29	18	51	28	19	18	23	0	30	29	27	21	67	40	19	59	30	33	0	27	21	22	39	20	31	40	21	31	24	38
HOM03D000116	819	1	31	26	24	13	37	20	24	25	20	1	24	28	30	22	67	33	21	34	36	38	1	23	28	24	45	23	24	25	24	25	24	30
HOM03D000122	802	4	29	33	28	14	51	13	28	28	21	0	28	23	26	19	62	43	18	44	36	25	0	31	2	22	33	19	22	24	20	27	23	39
HOM03D000125	772	6	31	30	25	12	39	16	25	25	20	2	24	22	29	21	54	43	10	46	30	27	1	23	16	18	43	27	28	24	21	23	22	26
HOM03D000129	764	1	30	24	26	41	43	16	19	19	20	4	23	24	29	26	42	26	15	47	25	33	0	26	20	19	32	20	27	26	18	21	21	32
HOM03D000139	733	1	29	25	26	13	49	15	17	17	18	0	25	18	19	17	40	61	14	51	30	38	0	13	30	23	31	17	24	26	16	27	18	15
HOM03D000142	728	1	31	20	18	14	30	14	21	21	20	14	18	19	22	20	52	32	10	60	30	33	8	30	13	22	33	19	24	23	19	17	21	31
HOM03D000153	673	11	29	17	18	12	42	14	21	22	20	0	18	19	22	17	63	40	13	45	31	14	0	21	9	17	32	19	23	23	18	18	18	27
HOM03D000156	657	1	30	6	12	60	5	10	2	3	7	3	9	6	9	31	116	27	5	54	5	9	0	14	2	40	48	10	68	45	11	19	8	13
HOM03D000162	626	1	29	16	16	18	33	15	21	22	16	0	16	17	14	12	47	33	12	30	29	24	0	25	2	16	36	17	21	31	19	16	10	42
HOM03D000166	615	1	29	26	24	8	50	22	14	15	19	6	24	10	34	20	38	17	9	42	18	25	0	26	0	16	23	20	17	18	14	29	10	21
HOM03D000192	542	2	31	21	14	13	22	10	24	27	38	9	7	15	20	13	32	21	3	53	24	21	2	13	16	13	13	10	12	13	15	14	13	21
HOM03D000194	528	2	29	3	18	8	33	5	14	13	13	0	18	9	10	11	38	18	11	35	13	44	0	15	4	11	18	9	51	46	12	18	11	19
HOM03D000205	499	1	28	22	19	1	20	9	17	18	7	0	18	29	54	21	19	13	9	27	8	38	0	14	0	14	14	9	21	31	15	11	14	7
HOM03D000209	492	1	29	17	15	9	16	20	9	12	13	1	17	16	38	9	36	26	7	28	18	26	0	11	0	17	23	13	20	21	14	12	14	14
HOM03D000214	480	1	31	12	10	8	18	8	14	13	14	4	10	17	14	11	42	32	7	40	20	17	2	13	2	12	24	14	16	22	13	11	16	24
HOM03D000218	474	2	31	15	12	7	23	8	9	10	11	3	12	12	15	10	38	23	7	33	17	23	2	13	9	13	21	13	30	27	12	12	15	19
HOM03D000226	463	3	29	19	20	7	44	5	8	10	10	0	20	10	11	9	29	38	5	21	13	17	0	14	2	8	14	10	33	26	24	14	9	13
HOM03D000230	457	2	31	13	15	8	17	9	14	14	13	2	13	15	19	19	34	20	10	25	18	22	2	11	6	13	21	13	18	20	15	12	15	11
HOM03D000265	420	1	29	12	12	6	22	10	12	12	10	0	13	10	14	9	40	22	7	21	16	20	0	21	4	10	17	11	16	21	8	11	8	25
HOM03D000277	410	1	31	11	12	10	20	10	10	10	11	6	11	11	10	15	33	14	8	35	17	25	2	10	8	10	17	11	16	15	12	10	12	8
HOM03D000282	402	1	31	13	11	9	20	7	11	11	10	3	12	10	11	9	41	22	7	1	16	19	1	17	9	12	21	11	14	14	10	12	11	27
HOM03D000304	379	5	31	16	15	7	23	8	8	6	16	3	15	14	8	9	23	18	3	20	13	18	1	16	10	10	20	10	9	11	11	11	12	15
HOM03D000306	379	2	29	11	11	9	20	7	16	15	8	0	11	8	9	8	30	13	7	35	14	12	0	11	2	10	17	9	22	14	8	11	9	22
HOM03D000307	378	2	29	9	9	4	14	9	12	14	9	0	8	12	22	8	28	22	2	38	13	13	0	11	3	8	20	9	14	20	7	7	15	18
HOM03D000330	356	2	29	12	10	4	26	7	12	12	5	0	11	8	12	8	25	23	10	17	16	15	0	14	4	8	17	6	12	14	9	11	8	20
HOM03D000335	353	1	29	12	10	8	14	9	9	8	10	0	10	10	9	9	31	21	6	23	16	17	0	16	2	10	18	10	11	11	10	10	7	16
HOM03D000347	346	2	29	10	10	6	20	5	9	9	6	0	9	10	9	8	25	19	7	24	16	20	0	12	5	8	15	9	16	16	10	9	10	14
HOM03D000353	344	2	31	10	10	9	20	5	7	8	8	2	12	10	8	10	22	21	4	27	15	12	1	3	12	11	17	8	12	13	11	11	9	16
HOM03D000365	336	3	28	11	13	8	23	7	9	8	8	0	12	9	8	11	27	16	3	20	18	18	0	13	0	8	15	9	9	6	9	12	8	18
HOM03D000437	287	1	31	7	7	7	11	6	7	3	5	2	6	9	20	12	15	9	3	24	11	12	1	6	2	6	7	9	30	16	9	7	12	6
HOM03D000466	271	5	29	7	7	4	14	5	6	6	5	0	7	7	5	4	18	12	9	19	9	10	0	8	14	6	10	5	13	23	6	6	12	14
HOM03D000468	271	1	29	6	6	14	14	5	7	7	7	0	6	7	8	7	23	15	4	16	11	14	0	6	12	8	8	11	8	9	7	6	12	7
HOM03D000483	266	1	28	8	9	7	16	4	8	8	9	0	8	9	9	9	21	12	7	9	13	10	0	11	0	7	12	10	8	8	7	9	7	11
HOM03D000501	258	1	29	17	17	4	29	5	7	7	4	0	16	5	5	7	14	11	3	16	9	6	0	6	3	6	9	5	9	10	5	15	1	7
HOM03D000526	249	2	29	13	10	6	21	4	6	6	5	0	16	6	8	6	15	11	4	12	9	6	0	9	2	6	11	8	9	8	6	9	4	13
HOM03D000543	243	1	28	9	10	7	15	6	6	5	6	0	10	7	8	5	13	12	5	17	10	7	0	14	0	5	10	7	8	9	6	9	5	12
HOM03D000565	236	1	30	5	5	5	7	4	6	7	6	6	5	5	8	5	16	9	4	10	6	8	0	7	15	5	7	6	15	31	5	5	3	10
HOM03D000582	230	1	29	9	10	4	15	4	8	8	5	0	9	6	6	5	20	13	5	9	10	11	0	5	2	5	10	5	8	10	5	9	5	9
HOM03D000588	229	1	31	9	8	4	14	7	4	6	4	4	8	4	7	5	15	8	5	11	11	9	3	8	10	7	9	6	9	9	5	7	5	8
HOM03D000596	228	3	29	6	6	5	11	6	8	5	8	0	6	7	6	6	17	12	4	12	13	7	1	8	0	6	12	6	9	8	7	6	7	13
HOM03D000628	217	1	29	6	6	3	9	3	5	5	6	0	8	6	8	7	16	10	4	21	9	9	0	6	8	5	12	6	6	6	6	6	7	8
HOM03D000632	216	2	31	8	10	4	14	3	5	7	3	2	9	5	5	4	15	10	2	15	6	8	2	7	9	4	8	4	7	7	8	9	5	11
HOM03D000701	199	1	29	6	6	5	15	4	4	4	6	0	7	5	4	4	12	8	1	20	10	5	0	5	6	6	11	5	7	7	6	6	6	8
HOM03D000778	180	1	23	6	4	1	1	1	0	6	2	0	0	2	2	2	13	18	3	5	7	18	0	0	2	0	12	1	42	25	1	0	6	0
HOM03D000864	166	2	30	9	5	3	10	3	5	7	3	2	6	3	7	3	18	7	2	8	6	4	0	5	4	3	5	3	7	4	3	5	4	12
HOM03D000886	164	1	28	5	5	5	6	4	6	7	5	0	5	5	5	6	13	8	2	5	8	8	0	3	0	4	8	5	7	7	5	6	5	6
HOM03D000948	155	2	30	5	4	8	6	5	6	10	5	2	4	5	3	6	4	3	3	0	7	13	3	5	3	6	8	4	6	8	3	3	3	4
HOM03D000995	148	1	29	6	6	2	9	4	5	5	3	0	6	3	6	6	13	8	2	5	6	6	0	2	2	4	11	3	4	5	3	7	3	3
HOM03D001002	148	3	31	3	3	4	7	6	3	3	4	2	4	5	3	7	8	4	6	10	5	3	2	4	4	7	5	7	4	5	4	3	5	8
HOM03D001039	144	1	30	6	5	4	10	3	3	3	2	1	5	2	3	2	11	6	3	10	5	5	0	4	9	3	6	3	7	7	3	5	3	5
HOM03D001074	141	1	31	4	5	3	7	3	2	3	3	2	5	4	4	3	13	7	4	8	3	7	1	4	4	3	5	3	4	4	4	6	7	6
HOM03D001145	134	1	29	7	5	3	7	0	3	6	3	13	6	2	0	5	9	4	5	7	4	5	3	4	2	3	3	3	2	5	2	5	3	5
HOM03D001274	121	1	31	3	3	3	6	4	3	3	2	2	3	3	3	3	9	6	2	8	6	5	1	4	6	5	6	3	3	3	4	3	3	3
HOM03D001315	118	2	28	3	3	0	5	3	4	5	3	0	3	3	7	3	10	6	1	7	7	4	1	3	0	3	6	4	5	5	3	3	3	5
HOM03D001365	115	1	29	2	2	4	4	3	4	3	1	0	2	2	16	2	11	3	2	10	5	2	0	2	1	3	10	3	2	3	3	2	5	3
HOM03D001429	111	22	28	2	2	1	6	2	6	6	4	0	3	3	3	4	10	7	1	6	6	5	0	3	0	3	6	3	4	5	3	1	2	4
HOM03D001449	110	1	31	3	3	3	4	4	3	3	3	2	3	3	3	2	8	3	3	5	3	4	4	6	5	3	6	3	2	3	3	3	3	4
HOM03D001476	108	1	31	5	3	3	6	2	3	3	1	1	3	5	2	3	7	4	2	10	6	3	2	2	2	3	5	3	4	4	3	3	2	3
HOM03D001527	106	1	28	1	2	1	5	2	1	1	1	0	2	3	3	4	5	4	1	12	8	3	0	10	0	3	8	2	5	6	2	2	5	4
HOM03D001564	104	1	31	3	4	1	9	2	2	2	4	3	4	2	2	2	6	5	3	6	4	3	2	6	3	2	4	2	3	2	3	4	2	4
HOM03D001602	102	1	30	3	3	3	2	4	3	2	4	2	3	4	3	6	6	4	1	5	4	3	0	3	2	3	5	3	3	3	3	3	4	5
HOM03D001683	97	2	31	3	3	3	2	2	2	4	2	1	3	3	2	4	4	5	3	7	5	4	1	3	2	3	4	3	3	3	3	3	2	5
HOM03D001838	91	2	30	5	5	2	6	3	3	2	2	1	6	2	2	2	3	3	1	4	3	2	0	3	4	3	2	3	4	4	1	5	2	3
HOM03D001893	89	1	29	2	4	5	5	1	1	1	2	0	4	3	5	2	2	2	3	2	3	3	0	2	1	2	4	5	1	1	2	4	15	2
HOM03D001976	86	1	31	3	3	1	4	1	2	2	2	1	3	2	2	4	7	4	1	5	4	5	1	2	4	2	3	1	3	3	3	3	2	3
HOM03D001997	85	1	31	2	2	6	2	2	3	2	4	2	2	2	2	2	8	2	3	8	4	3	2	2	2	2	2	2	2	2	2	2	2	2
HOM03D002032	84	4	28	1	1	3	1	2	2	2	3	0	1	2	1	2	10	3	2	9	4	7	0	4	0	3	3	2	5	3	2	1	2	3
HOM03D002076	82	1	27	3	2	1	4	1	4	4	2	0	2	2	2	2	6	5	0	9	3	5	0	4	0	2	4	2	1	1	2	2	1	6
HOM03D002138	80	1	30	1	2	3	4	2	1	2	2	4	2	2	1	2	5	3	1	8	3	2	2	3	0	2	2	2	7	3	2	2	2	3
HOM03D002537	71	1	31	2	2	2	5	2	2	2	1	2	2	1	2	2	4	1	2	6	1	2	2	3	2	2	3	2	1	1	1	4	2	5
HOM03D002632	69	1	31	3	3	1	5	1	2	2	1	1	3	4	1	1	4	2	2	3	2	2	1	2	2	1	2	1	5	2	1	3	1	5
HOM03D002682	68	1	27	3	3	1	5	1	2	2	2	0	3	2	2	1	4	3	0	3	4	2	0	3	0	2	4	2	1	1	2	3	2	5
HOM03D002822	65	1	26	2	2	1	2	1	2	2	2	0	2	3	11	1	7	3	0	0	3	2	0	2	0	1	3	2	2	2	2	2	2	1
HOM03D003458	53	2	29	1	1	1	3	1	2	2	1	1	1	1	2	1	4	2	1	2	3	2	0	3	0	1	3	1	2	2	1	1	1	6
HOM03D003534	52	1	30	5	3	1	4	1	1	2	4	1	4	2	2	1	1	1	0	1	1	1	2	1	1	2	2	1	1	2	1	1	1	1
HOM03D003626	51	2	29	2	2	1	2	1	1	1	1	1	2	2	1	2	3	1	0	3	2	2	1	2	0	2	3	1	2	1	1	2	4	2
HOM03D003649	50	1	31	1	3	1	1	1	1	1	2	1	1	1	1	1	4	1	1	11	1	1	1	1	2	1	2	1	1	1	1	1	1	2
HOM03D004051	47	1	29	2	2	2	3	2	1	1	1	1	1	1	1	1	2	3	1	1	3	1	0	1	3	1	2	1	2	2	1	2	0	2
HOM03D004084	47	2	22	1	1	0	4	2	1	2	1	0	1	3	1	1	3	3	0	3	2	8	0	0	0	1	2	2	1	2	0	2	0	0
HOM03D004121	46	1	28	2	1	1	1	1	1	1	1	0	1	1	7	1	4	2	0	3	1	1	0	1	2	1	2	1	1	2	1	1	2	2
HOM03D004720	42	1	21	0	0	2	0	0	1	1	1	0	0	1	4	1	2	3	0	2	2	1	0	1	0	1	4	1	4	3	2	0	3	2
HOM03D005157	40	1	29	1	1	1	2	1	1	1	1	1	1	1	1	1	3	2	0	3	1	1	0	1	2	1	2	2	2	2	1	1	1	1
HOM03D005180	40	1	23	0	0	1	0	1	2	1	1	1	0	3	2	1	2	2	2	5	2	0	0	4	0	1	2	1	1	1	1	0	2	1
HOM03D005361	39	3	28	2	1	1	2	1	1	1	2	0	1	1	1	1	2	2	0	3	1	1	0	1	1	1	1	1	1	1	2	1	3	2
HOM03D005419	39	1	27	1	1	2	1	1	1	1	1	0	1	1	0	1	2	1	0	1	1	1	0	2	2	1	7	1	1	1	1	1	1	3
HOM03D005524	38	2	24	1	1	0	2	1	1	1	2	0	1	1	2	1	4	1	0	0	1	1	0	1	2	1	6	1	0	3	1	1	1	0
HOM03D005876	37	1	25	2	2	1	4	1	1	1	1	0	2	1	1	1	2	1	1	1	2	1	0	0	0	1	2	1	2	2	1	2	0	0
HOM03D006204	35	7	27	0	1	1	2	1	1	1	1	0	1	1	1	1	2	2	1	3	1	1	0	1	0	1	2	1	1	1	1	1	1	3
HOM03D006905	32	1	24	1	1	1	2	1	0	1	1	0	1	1	1	1	2	2	0	3	2	2	0	0	0	1	2	1	1	1	1	1	1	0
HOM03D007141	30	1	27	1	1	1	2	1	1	1	1	0	1	1	1	1	2	1	0	1	1	0	0	1	1	1	1	1	1	1	1	1	1	2
HOM03D007542	26	2	17	0	0	1	0	0	1	1	2	0	0	2	1	1	4	1	2	1	1	2	0	0	0	2	0	2	0	0	1	0	1	0
HOM03D007753	22	1	8	0	0	0	0	0	0	0	0	0	0	2	1	0	2	0	1	0	0	0	0	0	0	0	10	4	0	1	1	0	0	0
HOM03D018410	2	1	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0