PLAZA 3.0 Dicots : Binding Sites

Gene families associated with a binding site

All is shown and individual cells refer to the target genes (per species).

Binding site: Motif_354
Name: VSF1PVGRP18
Description: VSF-1 binding site in French bean grp1.8 gene promoter; VSF-1 is a tomato bZIP transcription factor; VSF-1 binding site is found in 28 bp vs-1 element; This sequence controls vascular gene expression in transgenic tobacco; VS-1 found in bean grp1.8 gene promoter; Located between -203 and -176; Partially overlaps with NRE; Confers xylem-specific expression

#Associated genes: 28
#Associated gene families: 25

Click table-header(s) to enable sorting

gene family	#genes (in total)	#associated genes	species	aly	ath	atr	bra	bvu	cla	cme	cpa	cre	cru	csi	egr	fve	gma	gra	lja	mdo	mes	mtr	olu	osa	ppa	ppe	ptr	rco	sly	stu	tca	tpa	vvi	zma
HOM03D000011	2954	2	31	85	84	46	174	51	89	86	61	6	87	78	88	74	230	165	61	164	120	138	2	96	69	70	122	70	111	161	77	86	64	139
HOM03D000015	2743	1	29	87	92	43	172	45	67	74	68	0	95	95	149	84	163	140	57	184	110	87	0	105	32	86	139	78	69	79	88	79	67	109
HOM03D000024	2160	1	31	70	64	45	98	53	50	65	77	37	64	57	64	59	165	94	34	142	74	73	15	53	88	55	97	52	66	70	52	72	71	84
HOM03D000042	1637	1	29	49	47	37	75	59	39	38	42	0	44	50	58	43	128	74	27	90	59	77	0	68	17	52	65	46	76	80	48	44	45	60
HOM03D000061	1331	1	31	50	45	30	66	32	33	39	31	14	47	32	44	34	103	65	24	96	49	51	3	47	27	32	56	32	40	45	35	39	33	57
HOM03D000069	1220	1	31	33	31	30	57	27	26	31	31	29	32	36	36	31	82	51	16	79	48	47	20	34	41	33	67	36	38	37	34	29	28	70
HOM03D000113	850	1	31	21	24	31	31	26	28	33	35	23	24	23	27	18	52	33	5	11	30	36	19	25	46	23	40	23	30	31	21	24	23	34
HOM03D000175	582	1	31	23	23	6	36	11	15	15	14	4	20	15	13	13	37	20	7	44	16	28	4	21	12	14	26	12	25	30	18	19	13	28
HOM03D000186	550	1	31	9	15	13	13	13	17	18	18	16	13	19	30	24	27	14	11	24	18	26	16	23	13	15	26	11	18	28	10	13	15	24
HOM03D000298	385	1	31	13	12	8	23	5	8	8	11	8	12	11	10	11	22	16	7	18	19	10	6	16	10	9	23	11	14	13	11	12	10	18
HOM03D000318	368	1	31	12	10	7	21	8	10	10	10	4	13	8	16	11	28	17	5	23	11	21	1	14	4	9	13	6	10	15	8	13	9	21
HOM03D000361	338	1	31	11	11	3	16	7	9	9	9	11	11	7	6	4	31	14	5	17	13	26	6	9	5	7	14	7	20	10	6	12	6	16
HOM03D000477	268	1	29	8	8	4	15	8	9	8	7	0	8	8	13	7	16	18	5	10	13	9	0	10	5	7	15	7	9	9	8	8	7	9
HOM03D000742	188	2	31	6	6	5	9	4	4	5	4	5	7	4	4	4	12	6	2	12	6	6	4	7	8	4	7	9	6	7	4	6	7	8
HOM03D000932	157	1	29	11	6	4	9	3	4	4	4	0	6	2	5	5	14	6	4	6	5	8	0	4	2	4	8	3	7	6	5	6	1	5
HOM03D001105	138	1	31	5	3	3	6	4	4	4	3	1	3	3	4	3	9	9	4	4	5	4	1	6	3	3	4	3	6	7	3	3	8	10
HOM03D001147	133	1	29	4	5	5	10	3	1	2	4	0	4	3	3	5	8	5	4	7	5	4	0	6	5	3	7	5	3	3	3	5	3	8
HOM03D001375	114	1	30	5	3	3	5	2	2	6	5	2	2	4	4	2	4	8	2	4	3	6	0	7	2	1	6	4	4	6	3	2	3	4
HOM03D001390	113	1	31	4	4	2	6	1	3	3	1	1	3	2	2	3	11	6	1	6	2	4	1	4	8	2	4	3	5	4	2	3	3	9
HOM03D001582	103	1	27	19	6	2	12	1	1	1	2	0	11	3	1	2	5	3	0	6	3	0	0	1	2	2	4	1	1	2	3	5	2	2
HOM03D001612	101	1	31	4	3	3	4	3	2	2	4	1	3	2	3	2	8	3	2	8	2	8	1	2	1	2	4	4	4	4	2	3	3	4
HOM03D001709	96	1	24	7	2	3	1	0	0	3	2	2	0	4	7	0	4	6	2	4	3	4	1	10	2	0	8	0	5	5	2	0	2	7
HOM03D004162	46	1	25	2	2	1	5	1	1	1	1	0	2	1	2	1	4	2	0	2	2	2	0	0	0	1	2	1	2	4	1	2	1	0
HOM03D004208	46	1	30	1	2	1	2	2	1	1	2	1	1	3	1	2	2	1	0	7	1	1	1	1	1	2	2	1	1	1	1	1	1	1
HOM03D007860	21	2	17	0	0	0	0	1	0	1	1	0	0	1	0	1	2	2	1	3	1	1	0	0	0	1	1	1	1	1	0	0	1	0