PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_97
Name: E2Fc;E2Fd
Description: The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants

#Associated genes: 548
#Associated MapMan terms: 100

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
28	DNA	112 (20.44%)	7	13	18	13	17	16	13	15
27	RNA	104 (18.98%)	4	11	11	21	17	15	12	13
27.3	RNA.regulation of transcription	95 (17.34%)	4	11	10	18	14	14	12	12
28.1	DNA.synthesis/chromatin structure	86 (15.69%)	4	10	12	11	14	13	12	10
31	cell	24 (4.38%)	2	2	1	5	4	4	2	4
29	protein	23 (4.20%)	1	3	0	5	6	1	2	5
28.2	DNA.repair	20 (3.65%)	2	2	5	2	2	2	1	4
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	17 (3.10%)	2	4	1	2	2	1	3	2
30	signalling	17 (3.10%)	0	4	1	7	1	2	1	1
27.3.99	RNA.regulation of transcription.unclassified	15 (2.74%)	1	0	0	5	3	2	2	2
30.2	signalling.receptor kinases	15 (2.74%)	0	2	1	7	1	2	1	1
31.3	cell.cycle	15 (2.74%)	2	1	1	2	3	3	1	2
27.3.67	RNA.regulation of transcription.putative transcription regulator	14 (2.55%)	0	0	3	3	2	4	1	1
29.5	protein.degradation	11 (2.01%)	0	1	0	4	3	0	0	3
30.2.3	signalling.receptor kinases.leucine rich repeat III	10 (1.82%)	0	1	0	5	1	2	0	1
33	development	9 (1.64%)	1	0	1	0	1	3	1	2
33.99	development.unspecified	9 (1.64%)	1	0	1	0	1	3	1	2
27.1	RNA.processing	8 (1.46%)	0	0	1	3	3	0	0	1
30.2.11	signalling.receptor kinases.leucine rich repeat XI	8 (1.46%)	0	1	1	3	1	1	1	0
10	cell wall	7 (1.28%)	1	3	0	1	0	1	0	1
28.99	DNA.unspecified	7 (1.28%)	1	2	1	0	1	1	0	1
34	transport	7 (1.28%)	0	0	0	0	3	2	2	0
20	stress	6 (1.09%)	0	1	1	1	1	1	0	1
23	nucleotide metabolism	6 (1.09%)	0	0	1	2	0	0	1	2
27.3.62	RNA.regulation of transcription.Nucleosome/chromatin assembly factor group	6 (1.09%)	0	2	1	0	0	1	1	1
27.3.70	RNA.regulation of transcription.Silencing Group	6 (1.09%)	0	1	1	0	0	2	1	1
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	6 (1.09%)	0	0	1	1	2	2	0	0
29.5.9	protein.degradation.AAA type	6 (1.09%)	0	1	0	2	0	0	0	3
31.2	cell.division	6 (1.09%)	0	0	0	3	1	1	0	1
10.6	cell wall.degradation	5 (0.91%)	1	2	0	0	0	1	0	1
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	5 (0.91%)	1	2	0	0	0	1	0	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	5 (0.91%)	0	1	0	0	0	2	0	2
27.3.46	RNA.regulation of transcription.DNA methyltransferases	5 (0.91%)	0	1	0	2	0	0	1	1
27.3.5	RNA.regulation of transcription.ARR	5 (0.91%)	1	2	1	0	0	0	0	1
27.3.73	RNA.regulation of transcription.Zn-finger(CCHC)	5 (0.91%)	0	0	1	0	1	1	1	1
29.4	protein.postranslational modification	5 (0.91%)	0	1	0	1	1	1	1	0
23.1	nucleotide metabolism.synthesis	4 (0.73%)	0	0	1	2	0	0	0	1
23.1.2	nucleotide metabolism.synthesis.purine	4 (0.73%)	0	0	1	2	0	0	0	1
23.1.2.31	nucleotide metabolism.synthesis.purine.GMP synthetase	4 (0.73%)	0	0	1	2	0	0	0	1
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	4 (0.73%)	0	0	0	2	1	0	1	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	4 (0.73%)	0	1	1	0	1	0	0	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	4 (0.73%)	0	0	1	0	1	1	0	1
11	lipid metabolism	3 (0.55%)	0	0	1	0	2	0	0	0
20.1	stress.biotic	3 (0.55%)	0	0	0	1	0	1	0	1
20.2	stress.abiotic	3 (0.55%)	0	1	1	0	1	0	0	0
26	misc	3 (0.55%)	0	0	0	1	0	1	1	0
26.28	misc.GDSL-motif lipase	3 (0.55%)	0	0	0	1	0	1	1	0
29.1	protein.aa activation	3 (0.55%)	0	1	0	0	0	0	0	2
29.3	protein.targeting	3 (0.55%)	0	0	0	0	2	0	1	0
29.3.4	protein.targeting.secretory pathway	3 (0.55%)	0	0	0	0	2	0	1	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	3 (0.55%)	0	0	0	0	2	0	1	0
29.4.1	protein.postranslational modification.kinase	3 (0.55%)	0	1	0	1	0	1	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	3 (0.55%)	0	1	0	1	0	1	0	0
29.5.5	protein.degradation.serine protease	3 (0.55%)	0	0	0	2	1	0	0	0
31.1	cell.organisation	3 (0.55%)	0	1	0	0	0	0	1	1
34.99	transport.misc	3 (0.55%)	0	0	0	0	2	0	1	0
11.10	lipid metabolism.glycolipid synthesis	2 (0.36%)	0	0	1	0	1	0	0	0
11.10.2	lipid metabolism.glycolipid synthesis.DGDG synthase	2 (0.36%)	0	0	1	0	1	0	0	0
17	hormone metabolism	2 (0.36%)	0	0	0	0	0	1	0	1
17.2	hormone metabolism.auxin	2 (0.36%)	0	0	0	0	0	1	0	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	2 (0.36%)	0	0	0	0	0	1	0	1
20.2.1	stress.abiotic.heat	2 (0.36%)	0	1	1	0	0	0	0	0
23.5	nucleotide metabolism.deoxynucleotide metabolism	2 (0.36%)	0	0	0	0	0	0	1	1
27.1.19	RNA.processing.ribonucleases	2 (0.36%)	0	0	0	0	2	0	0	0
27.3.16	RNA.regulation of transcription.CCAAT box binding factor family, HAP5	2 (0.36%)	0	0	0	1	0	0	1	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	2 (0.36%)	0	0	0	0	2	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	2 (0.36%)	0	0	0	2	0	0	0	0
30.5	signalling.G-proteins	2 (0.36%)	0	2	0	0	0	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	2 (0.36%)	0	0	0	0	1	1	0	0
3	minor CHO metabolism	1 (0.18%)	0	0	0	0	0	0	0	1
4	glycolysis	1 (0.18%)	0	0	0	0	0	0	0	1
8	TCA / org transformation	1 (0.18%)	0	0	0	0	0	0	0	1
10.7	cell wall.modification	1 (0.18%)	0	0	0	1	0	0	0	0
10.8	cell wall.pectin*esterases	1 (0.18%)	0	1	0	0	0	0	0	0
10.8.1	cell wall.pectin*esterases.PME	1 (0.18%)	0	1	0	0	0	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.18%)	0	0	0	0	1	0	0	0
11.9.2	lipid metabolism.lipid degradation.lipases	1 (0.18%)	0	0	0	0	1	0	0	0
11.9.2.1	lipid metabolism.lipid degradation.lipases.triacylglycerol lipase	1 (0.18%)	0	0	0	0	1	0	0	0
20.2.2	stress.abiotic.cold	1 (0.18%)	0	0	0	0	1	0	0	0
23.5.4	nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase	1 (0.18%)	0	0	0	0	0	0	0	1
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	1 (0.18%)	0	0	0	1	0	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.18%)	0	0	0	0	0	1	0	0
27.3.55	RNA.regulation of transcription.HDA	1 (0.18%)	0	0	0	0	1	0	0	0
27.3.68	RNA.regulation of transcription.PWWP domain protein	1 (0.18%)	0	0	0	0	1	0	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	1 (0.18%)	0	0	1	0	0	0	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	1 (0.18%)	0	0	1	0	0	0	0	0
29.2.4	protein.synthesis.elongation	1 (0.18%)	1	0	0	0	0	0	0	0
29.5.1	protein.degradation.subtilases	1 (0.18%)	0	0	0	0	1	0	0	0
3.2	minor CHO metabolism.trehalose	1 (0.18%)	0	0	0	0	0	0	0	1
27.4	RNA.RNA binding	1 (0.18%)	0	0	0	0	0	1	0	0
29.2	protein.synthesis	1 (0.18%)	1	0	0	0	0	0	0	0
3.2.2	minor CHO metabolism.trehalose.TPP	1 (0.18%)	0	0	0	0	0	0	0	1
4.1	glycolysis.cytosolic branch	1 (0.18%)	0	0	0	0	0	0	0	1
34.10	transport.nucleotides	1 (0.18%)	0	0	0	0	0	0	1	0
34.2	transport.sugars	1 (0.18%)	0	0	0	0	0	1	0	0
4.1.14	glycolysis.cytosolic branch.pyruvate kinase (PK)	1 (0.18%)	0	0	0	0	0	0	0	1
4.2	glycolysis.plastid branch	1 (0.18%)	0	0	0	0	0	0	0	1
4.2.14	glycolysis.plastid branch.pyruvate kinase (PK)	1 (0.18%)	0	0	0	0	0	0	0	1
8.2	TCA / org transformation.other organic acid transformations	1 (0.18%)	0	0	0	0	0	0	0	1
8.2.10	TCA / org transformation.other organic acid transformatons.malic	1 (0.18%)	0	0	0	0	0	0	0	1