Gene Ontology terms associated with a binding site

Binding site
Motif_601
Name
D3GMAUX28
Description
D3; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; Located between -750 and -760; A/T-rich sequence
#Associated genes
11
#Associated GO terms
301
 
Biological Process
Molecular Function
Cellular Component






Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process10 (90.91%)0200030221
GO:0044763single-organism cellular process7 (63.64%)0200030011
GO:0044699single-organism process7 (63.64%)0200030011
GO:0016043cellular component organization5 (45.45%)0100030010
GO:0071840cellular component organization or biogenesis5 (45.45%)0100030010
GO:0008152metabolic process5 (45.45%)0100100111
GO:0071704organic substance metabolic process5 (45.45%)0100100111
GO:0044238primary metabolic process5 (45.45%)0100100111
GO:0007049cell cycle4 (36.36%)0100020010
GO:0044237cellular metabolic process4 (36.36%)0100000111
GO:0007010cytoskeleton organization4 (36.36%)0100030000
GO:0043170macromolecule metabolic process4 (36.36%)0000100111
GO:0006996organelle organization4 (36.36%)0100030000
GO:0065007biological regulation3 (27.27%)0100000110
GO:0009058biosynthetic process3 (27.27%)0000000111
GO:0022402cell cycle process3 (27.27%)0100020000
GO:0006725cellular aromatic compound metabolic process3 (27.27%)0100000110
GO:0044249cellular biosynthetic process3 (27.27%)0000000111
GO:0034645cellular macromolecule biosynthetic process3 (27.27%)0000000111
GO:0044260cellular macromolecule metabolic process3 (27.27%)0000000111
GO:0034641cellular nitrogen compound metabolic process3 (27.27%)0100000110
GO:0046483heterocycle metabolic process3 (27.27%)0100000110
GO:0009059macromolecule biosynthetic process3 (27.27%)0000000111
GO:0000226microtubule cytoskeleton organization3 (27.27%)0100020000
GO:0007017microtubule-based process3 (27.27%)0100020000
GO:0006807nitrogen compound metabolic process3 (27.27%)0100000110
GO:0006139nucleobase-containing compound metabolic process3 (27.27%)0100000110
GO:1901360organic cyclic compound metabolic process3 (27.27%)0100000110
GO:1901576organic substance biosynthetic process3 (27.27%)0000000111
GO:0050789regulation of biological process3 (27.27%)0100000110
GO:0031323regulation of cellular metabolic process3 (27.27%)0100000110
GO:0050794regulation of cellular process3 (27.27%)0100000110
GO:0019222regulation of metabolic process3 (27.27%)0100000110
GO:0051171regulation of nitrogen compound metabolic process3 (27.27%)0100000110
GO:0019219regulation of nucleobase-containing compound metabolic process3 (27.27%)0100000110
GO:0080090regulation of primary metabolic process3 (27.27%)0100000110
GO:0050896response to stimulus3 (27.27%)0100000110
GO:0032774RNA biosynthetic process2 (18.18%)0000000110
GO:0016070RNA metabolic process2 (18.18%)0000000110
GO:0019438aromatic compound biosynthetic process2 (18.18%)0000000110
GO:0051301cell division2 (18.18%)0000020000
GO:0044085cellular component biogenesis2 (18.18%)0100010000
GO:0044271cellular nitrogen compound biosynthetic process2 (18.18%)0000000110
GO:0000910cytokinesis2 (18.18%)0000020000
GO:0032502developmental process2 (18.18%)0000010010
GO:0010467gene expression2 (18.18%)0000000110
GO:0018130heterocycle biosynthetic process2 (18.18%)0000000110
GO:0007275multicellular organismal development2 (18.18%)0000010010
GO:0032501multicellular organismal process2 (18.18%)0000010010
GO:0090304nucleic acid metabolic process2 (18.18%)0000000110
GO:0034654nucleobase-containing compound biosynthetic process2 (18.18%)0000000110
GO:1901362organic cyclic compound biosynthetic process2 (18.18%)0000000110
GO:2001141regulation of RNA biosynthetic process2 (18.18%)0000000110
GO:0051252regulation of RNA metabolic process2 (18.18%)0000000110
GO:0009889regulation of biosynthetic process2 (18.18%)0000000110
GO:0031326regulation of cellular biosynthetic process2 (18.18%)0000000110
GO:2000112regulation of cellular macromolecule biosynthetic process2 (18.18%)0000000110
GO:0010468regulation of gene expression2 (18.18%)0000000110
GO:0010556regulation of macromolecule biosynthetic process2 (18.18%)0000000110
GO:0060255regulation of macromolecule metabolic process2 (18.18%)0000000110
GO:0006355regulation of transcription, DNA-dependent2 (18.18%)0000000110
GO:0042221response to chemical2 (18.18%)0000000110
GO:0009735response to cytokinin2 (18.18%)0000000110
GO:0009719response to endogenous stimulus2 (18.18%)0000000110
GO:0009725response to hormone2 (18.18%)0000000110
GO:0010033response to organic substance2 (18.18%)0000000110
GO:0044707single-multicellular organism process2 (18.18%)0000010010
GO:0044767single-organism developmental process2 (18.18%)0000010010
GO:0044710single-organism metabolic process2 (18.18%)0100000001
GO:0006351transcription, DNA-templated2 (18.18%)0000000110
GO:0006075(1->3)-beta-D-glucan biosynthetic process1 (9.09%)0000000001
GO:0006074(1->3)-beta-D-glucan metabolic process1 (9.09%)0000000001
GO:0009294DNA mediated transformation1 (9.09%)0000000100
GO:0006184GTP catabolic process1 (9.09%)0100000000
GO:0046039GTP metabolic process1 (9.09%)0100000000
GO:0032482Rab protein signal transduction1 (9.09%)0100000000
GO:0007265Ras protein signal transduction1 (9.09%)0100000000
GO:0048856anatomical structure development1 (9.09%)0000000010
GO:0048646anatomical structure formation involved in morphogenesis1 (9.09%)0000000010
GO:0009653anatomical structure morphogenesis1 (9.09%)0000000010
GO:0019439aromatic compound catabolic process1 (9.09%)0100000000
GO:0051274beta-glucan biosynthetic process1 (9.09%)0000000001
GO:0051273beta-glucan metabolic process1 (9.09%)0000000001
GO:0016051carbohydrate biosynthetic process1 (9.09%)0000000001
GO:1901136carbohydrate derivative catabolic process1 (9.09%)0100000000
GO:1901135carbohydrate derivative metabolic process1 (9.09%)0100000000
GO:0005975carbohydrate metabolic process1 (9.09%)0000000001
GO:0009056catabolic process1 (9.09%)0100000000
GO:0007154cell communication1 (9.09%)0100000000
GO:0042546cell wall biogenesis1 (9.09%)0000010000
GO:0071554cell wall organization or biogenesis1 (9.09%)0000010000
GO:0034637cellular carbohydrate biosynthetic process1 (9.09%)0000000001
GO:0044262cellular carbohydrate metabolic process1 (9.09%)0000000001
GO:0044248cellular catabolic process1 (9.09%)0100000000
GO:0022607cellular component assembly1 (9.09%)0100000000
GO:0010927cellular component assembly involved in morphogenesis1 (9.09%)0000000010
GO:0032989cellular component morphogenesis1 (9.09%)0000000010
GO:0048869cellular developmental process1 (9.09%)0000000010
GO:0006073cellular glucan metabolic process1 (9.09%)0000000001
GO:0044270cellular nitrogen compound catabolic process1 (9.09%)0100000000
GO:0033692cellular polysaccharide biosynthetic process1 (9.09%)0000000001
GO:0044264cellular polysaccharide metabolic process1 (9.09%)0000000001
GO:0048610cellular process involved in reproduction1 (9.09%)0000000010
GO:0051716cellular response to stimulus1 (9.09%)0100000000
GO:0003006developmental process involved in reproduction1 (9.09%)0000000010
GO:0045229external encapsulating structure organization1 (9.09%)0000000010
GO:0048229gametophyte development1 (9.09%)0000000010
GO:0009292genetic transfer1 (9.09%)0000000100
GO:0009250glucan biosynthetic process1 (9.09%)0000000001
GO:0044042glucan metabolic process1 (9.09%)0000000001
GO:1901658glycosyl compound catabolic process1 (9.09%)0100000000
GO:1901657glycosyl compound metabolic process1 (9.09%)0100000000
GO:1901069guanosine-containing compound catabolic process1 (9.09%)0100000000
GO:1901068guanosine-containing compound metabolic process1 (9.09%)0100000000
GO:0046700heterocycle catabolic process1 (9.09%)0100000000
GO:0035556intracellular signal transduction1 (9.09%)0100000000
GO:0065003macromolecular complex assembly1 (9.09%)0100000000
GO:0043933macromolecular complex subunit organization1 (9.09%)0100000000
GO:0051321meiotic cell cycle1 (9.09%)0000000010
GO:0009556microsporogenesis1 (9.09%)0000000010
GO:0044764multi-organism cellular process1 (9.09%)0000000100
GO:0051704multi-organism process1 (9.09%)0000000100
GO:0034655nucleobase-containing compound catabolic process1 (9.09%)0100000000
GO:0055086nucleobase-containing small molecule metabolic process1 (9.09%)0100000000
GO:0009164nucleoside catabolic process1 (9.09%)0100000000
GO:0009116nucleoside metabolic process1 (9.09%)0100000000
GO:1901292nucleoside phosphate catabolic process1 (9.09%)0100000000
GO:0006753nucleoside phosphate metabolic process1 (9.09%)0100000000
GO:0009143nucleoside triphosphate catabolic process1 (9.09%)0100000000
GO:0009141nucleoside triphosphate metabolic process1 (9.09%)0100000000
GO:0009166nucleotide catabolic process1 (9.09%)0100000000
GO:0009117nucleotide metabolic process1 (9.09%)0100000000
GO:0070925organelle assembly1 (9.09%)0100000000
GO:1901361organic cyclic compound catabolic process1 (9.09%)0100000000
GO:1901575organic substance catabolic process1 (9.09%)0100000000
GO:1901565organonitrogen compound catabolic process1 (9.09%)0100000000
GO:1901564organonitrogen compound metabolic process1 (9.09%)0100000000
GO:0046434organophosphate catabolic process1 (9.09%)0100000000
GO:0019637organophosphate metabolic process1 (9.09%)0100000000
GO:0007389pattern specification process1 (9.09%)0000010000
GO:0006796phosphate-containing compound metabolic process1 (9.09%)0100000000
GO:0006793phosphorus metabolic process1 (9.09%)0100000000
GO:0080175phragmoplast microtubule organization1 (9.09%)0100000000
GO:0009832plant-type cell wall biogenesis1 (9.09%)0000010000
GO:0071669plant-type cell wall organization or biogenesis1 (9.09%)0000010000
GO:0048236plant-type spore development1 (9.09%)0000000010
GO:0009555pollen development1 (9.09%)0000000010
GO:0010584pollen exine formation1 (9.09%)0000000010
GO:0010208pollen wall assembly1 (9.09%)0000000010
GO:0000271polysaccharide biosynthetic process1 (9.09%)0000000001
GO:0005976polysaccharide metabolic process1 (9.09%)0000000001
GO:0006461protein complex assembly1 (9.09%)0100000000
GO:0070271protein complex biogenesis1 (9.09%)0100000000
GO:0071822protein complex subunit organization1 (9.09%)0100000000
GO:0019538protein metabolic process1 (9.09%)0000100000
GO:0006508proteolysis1 (9.09%)0000100000
GO:0006152purine nucleoside catabolic process1 (9.09%)0100000000
GO:0042278purine nucleoside metabolic process1 (9.09%)0100000000
GO:0009146purine nucleoside triphosphate catabolic process1 (9.09%)0100000000
GO:0009144purine nucleoside triphosphate metabolic process1 (9.09%)0100000000
GO:0006195purine nucleotide catabolic process1 (9.09%)0100000000
GO:0006163purine nucleotide metabolic process1 (9.09%)0100000000
GO:0046130purine ribonucleoside catabolic process1 (9.09%)0100000000
GO:0046128purine ribonucleoside metabolic process1 (9.09%)0100000000
GO:0009207purine ribonucleoside triphosphate catabolic process1 (9.09%)0100000000
GO:0009205purine ribonucleoside triphosphate metabolic process1 (9.09%)0100000000
GO:0009154purine ribonucleotide catabolic process1 (9.09%)0100000000
GO:0009150purine ribonucleotide metabolic process1 (9.09%)0100000000
GO:0072523purine-containing compound catabolic process1 (9.09%)0100000000
GO:0072521purine-containing compound metabolic process1 (9.09%)0100000000
GO:0003002regionalization1 (9.09%)0000010000
GO:0033124regulation of GTP catabolic process1 (9.09%)0100000000
GO:0043087regulation of GTPase activity1 (9.09%)0100000000
GO:0032313regulation of Rab GTPase activity1 (9.09%)0100000000
GO:0032483regulation of Rab protein signal transduction1 (9.09%)0100000000
GO:0032318regulation of Ras GTPase activity1 (9.09%)0100000000
GO:0046578regulation of Ras protein signal transduction1 (9.09%)0100000000
GO:0009894regulation of catabolic process1 (9.09%)0100000000
GO:0050790regulation of catalytic activity1 (9.09%)0100000000
GO:0010646regulation of cell communication1 (9.09%)0100000000
GO:0031329regulation of cellular catabolic process1 (9.09%)0100000000
GO:0051336regulation of hydrolase activity1 (9.09%)0100000000
GO:1902531regulation of intracellular signal transduction1 (9.09%)0100000000
GO:0065009regulation of molecular function1 (9.09%)0100000000
GO:0009118regulation of nucleoside metabolic process1 (9.09%)0100000000
GO:0030811regulation of nucleotide catabolic process1 (9.09%)0100000000
GO:0006140regulation of nucleotide metabolic process1 (9.09%)0100000000
GO:0019220regulation of phosphate metabolic process1 (9.09%)0100000000
GO:0051174regulation of phosphorus metabolic process1 (9.09%)0100000000
GO:0033121regulation of purine nucleotide catabolic process1 (9.09%)0100000000
GO:1900542regulation of purine nucleotide metabolic process1 (9.09%)0100000000
GO:0048583regulation of response to stimulus1 (9.09%)0100000000
GO:0009966regulation of signal transduction1 (9.09%)0100000000
GO:0023051regulation of signaling1 (9.09%)0100000000
GO:0051056regulation of small GTPase mediated signal transduction1 (9.09%)0100000000
GO:0000003reproduction1 (9.09%)0000000010
GO:0022414reproductive process1 (9.09%)0000000010
GO:0042454ribonucleoside catabolic process1 (9.09%)0100000000
GO:0009119ribonucleoside metabolic process1 (9.09%)0100000000
GO:0009203ribonucleoside triphosphate catabolic process1 (9.09%)0100000000
GO:0009199ribonucleoside triphosphate metabolic process1 (9.09%)0100000000
GO:0009261ribonucleotide catabolic process1 (9.09%)0100000000
GO:0009259ribonucleotide metabolic process1 (9.09%)0100000000
GO:0019693ribose phosphate metabolic process1 (9.09%)0100000000
GO:0007165signal transduction1 (9.09%)0100000000
GO:0023052signaling1 (9.09%)0100000000
GO:0044702single organism reproductive process1 (9.09%)0000000010
GO:0044700single organism signaling1 (9.09%)0100000000
GO:0044711single-organism biosynthetic process1 (9.09%)0000000001
GO:0044723single-organism carbohydrate metabolic process1 (9.09%)0000000001
GO:0044712single-organism catabolic process1 (9.09%)0100000000
GO:0007264small GTPase mediated signal transduction1 (9.09%)0100000000
GO:0044281small molecule metabolic process1 (9.09%)0100000000
GO:0051225spindle assembly1 (9.09%)0100000000
GO:0007051spindle organization1 (9.09%)0100000000
GO:0010051xylem and phloem pattern formation1 (9.09%)0000010000

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding7 (63.64%)0000130210
GO:1901363heterocyclic compound binding4 (36.36%)0000100210
GO:0003676nucleic acid binding4 (36.36%)0000100210
GO:0097159organic cyclic compound binding4 (36.36%)0000100210
GO:0005515protein binding4 (36.36%)0000030100
GO:0003677DNA binding3 (27.27%)0000000210
GO:0003824catalytic activity3 (27.27%)0000100011
GO:0008092cytoskeletal protein binding3 (27.27%)0000030000
GO:0008017microtubule binding3 (27.27%)0000030000
GO:0032403protein complex binding3 (27.27%)0000030000
GO:0015631tubulin binding3 (27.27%)0000030000
GO:0008047enzyme activator activity2 (18.18%)0100000100
GO:0030234enzyme regulator activity2 (18.18%)0100000100
GO:0016787hydrolase activity2 (18.18%)0000100010
GO:0001071nucleic acid binding transcription factor activity2 (18.18%)0000000110
GO:0000975regulatory region DNA binding2 (18.18%)0000000110
GO:0001067regulatory region nucleic acid binding2 (18.18%)0000000110
GO:0043565sequence-specific DNA binding2 (18.18%)0000000110
GO:0003700sequence-specific DNA binding transcription factor activity2 (18.18%)0000000110
GO:0044212transcription regulatory region DNA binding2 (18.18%)0000000110
GO:0000976transcription regulatory region sequence-specific DNA binding2 (18.18%)0000000110
GO:00038431,3-beta-D-glucan synthase activity1 (9.09%)0000000001
GO:0005096GTPase activator activity1 (9.09%)0100000000
GO:0030695GTPase regulator activity1 (9.09%)0100000000
GO:0005097Rab GTPase activator activity1 (9.09%)0100000000
GO:0005099Ras GTPase activator activity1 (9.09%)0100000000
GO:0035251UDP-glucosyltransferase activity1 (9.09%)0000000001
GO:0008194UDP-glycosyltransferase activity1 (9.09%)0000000001
GO:0004190aspartic-type endopeptidase activity1 (9.09%)0000100000
GO:0070001aspartic-type peptidase activity1 (9.09%)0000100000
GO:0043169cation binding1 (9.09%)0000100000
GO:0004175endopeptidase activity1 (9.09%)0000100000
GO:0046527glucosyltransferase activity1 (9.09%)0000000001
GO:0016798hydrolase activity, acting on glycosyl bonds1 (9.09%)0000000010
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds1 (9.09%)0000000010
GO:0043167ion binding1 (9.09%)0000100000
GO:0019209kinase activator activity1 (9.09%)0000000100
GO:0019207kinase regulator activity1 (9.09%)0000000100
GO:0046872metal ion binding1 (9.09%)0000100000
GO:0060589nucleoside-triphosphatase regulator activity1 (9.09%)0100000000
GO:0008233peptidase activity1 (9.09%)0000100000
GO:0070011peptidase activity, acting on L-amino acid peptides1 (9.09%)0000100000
GO:0004650polygalacturonase activity1 (9.09%)0000000010
GO:0030295protein kinase activator activity1 (9.09%)0000000100
GO:0019887protein kinase regulator activity1 (9.09%)0000000100
GO:0030296protein tyrosine kinase activator activity1 (9.09%)0000000100
GO:0005083small GTPase regulator activity1 (9.09%)0100000000
GO:0016740transferase activity1 (9.09%)0000000001
GO:0016757transferase activity, transferring glycosyl groups1 (9.09%)0000000001
GO:0016758transferase activity, transferring hexosyl groups1 (9.09%)0000000001
GO:0046914transition metal ion binding1 (9.09%)0000100000
GO:0008270zinc ion binding1 (9.09%)0000100000

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell5 (45.45%)0100010111
GO:0044464cell part5 (45.45%)0100010111
GO:0005622intracellular4 (36.36%)0100010110
GO:0043229intracellular organelle4 (36.36%)0100010110
GO:0044424intracellular part4 (36.36%)0100010110
GO:0043226organelle4 (36.36%)0100010110
GO:0043231intracellular membrane-bounded organelle3 (27.27%)0100000110
GO:0032991macromolecular complex3 (27.27%)0100010001
GO:0043227membrane-bounded organelle3 (27.27%)0100000110
GO:0005634nucleus3 (27.27%)0100000110
GO:0043234protein complex3 (27.27%)0100010001
GO:0005737cytoplasm2 (18.18%)0100010000
GO:0044444cytoplasmic part2 (18.18%)0100010000
GO:0044430cytoskeletal part2 (18.18%)0100010000
GO:0005856cytoskeleton2 (18.18%)0100010000
GO:0043232intracellular non-membrane-bounded organelle2 (18.18%)0100010000
GO:0044446intracellular organelle part2 (18.18%)0100010000
GO:0015630microtubule cytoskeleton2 (18.18%)0100010000
GO:0043228non-membrane-bounded organelle2 (18.18%)0100010000
GO:0044422organelle part2 (18.18%)0100010000
GO:0009524phragmoplast2 (18.18%)0100010000
GO:0005819spindle2 (18.18%)0100010000
GO:00001481,3-beta-D-glucan synthase complex1 (9.09%)0000000001
GO:0070652HAUS complex1 (9.09%)0100000000
GO:1902494catalytic complex1 (9.09%)0000000001
GO:0071944cell periphery1 (9.09%)0000000001
GO:0016020membrane1 (9.09%)0000000001
GO:0044425membrane part1 (9.09%)0000000001
GO:0005874microtubule1 (9.09%)0000010000
GO:0005875microtubule associated complex1 (9.09%)0100000000
GO:0005886plasma membrane1 (9.09%)0000000001
GO:0044459plasma membrane part1 (9.09%)0000000001
GO:1990234transferase complex1 (9.09%)0000000001