PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_598
Name: SORLIP3AT
Description: one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; See also all SORLIPs and also all SORLREPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data

#Associated genes: 44
#Associated MapMan terms: 36

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	10 (22.73%)	0	2	0	3	5	0	0	0
27.3	RNA.regulation of transcription	9 (20.45%)	0	1	0	3	5	0	0	0
1	PS	4 (9.09%)	1	0	0	3	0	0	0	0
1.3	PS.calvin cycle	4 (9.09%)	1	0	0	3	0	0	0	0
1.3.6	PS.calvin cycle.aldolase	4 (9.09%)	1	0	0	3	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	4 (9.09%)	0	0	0	2	2	0	0	0
26	misc	3 (6.82%)	0	0	0	3	0	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	3 (6.82%)	0	0	0	2	0	1	0	0
10	cell wall	2 (4.55%)	0	0	0	2	0	0	0	0
10.7	cell wall.modification	2 (4.55%)	0	0	0	2	0	0	0	0
27.3.17	RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family	2 (4.55%)	0	0	0	0	2	0	0	0
29	protein	2 (4.55%)	1	0	0	0	1	0	0	0
29.5.11.4.3.3	protein.degradation.ubiquitin.E3.SCF.cullin	2 (4.55%)	0	0	1	0	0	0	0	1
31	cell	2 (4.55%)	0	0	0	0	0	0	1	1
33	development	2 (4.55%)	1	0	0	1	0	0	0	0
33.99	development.unspecified	2 (4.55%)	1	0	0	1	0	0	0	0
20	stress	1 (2.27%)	0	0	0	0	1	0	0	0
20.2	stress.abiotic	1 (2.27%)	0	0	0	0	1	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (2.27%)	0	0	0	1	0	0	0	0
26.7	misc.oxidases - copper, flavone etc	1 (2.27%)	0	0	0	1	0	0	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (2.27%)	0	0	0	1	0	0	0	0
27.1	RNA.processing	1 (2.27%)	0	1	0	0	0	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	1 (2.27%)	0	1	0	0	0	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (2.27%)	0	0	0	1	0	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (2.27%)	0	0	0	0	1	0	0	0
28	DNA	1 (2.27%)	0	0	1	0	0	0	0	0
28.2	DNA.repair	1 (2.27%)	0	0	1	0	0	0	0	0
29.4	protein.postranslational modification	1 (2.27%)	1	0	0	0	0	0	0	0
29.5	protein.degradation	1 (2.27%)	0	0	0	0	1	0	0	0
29.5.11	protein.degradation.ubiquitin	1 (2.27%)	0	0	0	0	1	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (2.27%)	0	0	0	0	1	0	0	0
29.5.11.4.5	protein.degradation.ubiquitin.E3.BTB/POZ Cullin3	1 (2.27%)	0	0	0	0	0	1	0	0
31.1	cell.organisation	1 (2.27%)	0	0	0	0	0	0	1	0
31.3	cell.cycle	1 (2.27%)	0	0	0	0	0	0	0	1
34	transport	1 (2.27%)	0	0	0	0	0	0	0	1
34.8	transport.metabolite transporters at the envelope membrane	1 (2.27%)	0	0	0	0	0	0	0	1