InterPro domains associated with a binding site

Binding site
Motif_504
Name
LFY
Description
Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins
#Associated genes
282
#Associated InterPro terms
291

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InterPro Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
IPR000719Protein kinase domain17 (6.03%)0002323115
IPR011009Protein kinase-like domain17 (6.03%)0002323115
IPR027417P-loop containing nucleoside triphosphate hydrolase15 (5.32%)0101551002
IPR008271Serine/threonine-protein kinase, active site14 (4.96%)0001323104
IPR013320Concanavalin A-like lectin/glucanase, subgroup13 (4.61%)0002212213
IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain13 (4.61%)0001313104
IPR003593AAA+ ATPase domain10 (3.55%)0001250002
IPR017441Protein kinase, ATP binding site10 (3.55%)0002210104
IPR008972Cupredoxin9 (3.19%)1210011111
IPR017761Laccase9 (3.19%)1210011111
IPR002355Multicopper oxidase, copper-binding site9 (3.19%)1210011111
IPR001117Multicopper oxidase, type 19 (3.19%)1210011111
IPR011706Multicopper oxidase, type 29 (3.19%)1210011111
IPR011707Multicopper oxidase, type 39 (3.19%)1210011111
IPR017871ABC transporter, conserved site8 (2.84%)0001230002
IPR003439ABC transporter-like8 (2.84%)0001230002
IPR013083Zinc finger, RING/FYVE/PHD-type8 (2.84%)3200120000
IPR005813Ribosomal protein L207 (2.48%)0110000131
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain7 (2.48%)0001201012
IPR011989Armadillo-like helical6 (2.13%)0000210003
IPR016024Armadillo-type fold6 (2.13%)0000210003
IPR009057Homeodomain-like6 (2.13%)0010500000
IPR001471AP2/ERF domain5 (1.77%)0000210002
IPR016177DNA-binding domain5 (1.77%)0000210002
IPR011685LETM1-like5 (1.77%)0100101101
IPR013210Leucine-rich repeat-containing N-terminal, type 25 (1.77%)0000210002
IPR011990Tetratricopeptide-like helical5 (1.77%)0001120010
IPR012336Thioredoxin-like fold5 (1.77%)0101011001
IPR001841Zinc finger, RING-type5 (1.77%)2100110000
IPR026082ABC transporter A, ABCA4 (1.42%)0001110001
IPR001480Bulb-type lectin domain4 (1.42%)0001002001
IPR011424C1-like4 (1.42%)2100001000
IPR010402CCT domain4 (1.42%)0010101001
IPR022796Chlorophyll A-B binding protein4 (1.42%)0000030001
IPR001344Chlorophyll A-B binding protein, plant4 (1.42%)0000030001
IPR023329Chlorophyll a/b binding protein domain4 (1.42%)0000030001
IPR009695Diacylglycerol glucosyltransferase, N-terminal4 (1.42%)0000111001
IPR007235Glycosyl transferase, family 28, C-terminal4 (1.42%)0000111001
IPR003591Leucine-rich repeat, typical subtype4 (1.42%)0000010003
IPR025756MYB-CC type transcription factor, LHEQLE-containing domain4 (1.42%)0000400000
IPR006447Myb domain, plants4 (1.42%)0000400000
IPR016040NAD(P)-binding domain4 (1.42%)0001011001
IPR012677Nucleotide-binding, alpha-beta plait4 (1.42%)0001011010
IPR000504RNA recognition motif domain4 (1.42%)0001011010
IPR011051RmlC-like cupin domain4 (1.42%)0010001110
IPR014710RmlC-like jelly roll fold4 (1.42%)0010001110
IPR001005SANT/Myb domain4 (1.42%)0000400000
IPR001680WD40 repeat4 (1.42%)0000111001
IPR017986WD40-repeat-containing domain4 (1.42%)0000111001
IPR015943WD40/YVTN repeat-like-containing domain4 (1.42%)0000111001
IPR012946X84 (1.42%)0011001001
IPR013087Zinc finger C2H2-type/integrase DNA-binding domain4 (1.42%)0000021001
IPR007087Zinc finger, C2H24 (1.42%)0000021001
IPR000225Armadillo3 (1.06%)0000200001
IPR004827Basic-leucine zipper domain3 (1.06%)0100200000
IPR008985Concanavalin A-like lectin/glucanases superfamily3 (1.06%)0000010110
IPR012864Cysteamine dioxygenase3 (1.06%)0010000110
IPR004146DC13 (1.06%)2100000000
IPR010285DNA helicase Pif13 (1.06%)0000300000
IPR020472G-protein beta WD-40 repeat3 (1.06%)0000111000
IPR024788Malectin-like carbohydrate-binding domain3 (1.06%)0000200001
IPR017930Myb domain3 (1.06%)0000300000
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain3 (1.06%)0000010011
IPR021099Plant organelle RNA recognition domain3 (1.06%)0001110000
IPR024134Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone3 (1.06%)0001011000
IPR001424Superoxide dismutase, copper/zinc binding domain3 (1.06%)0001011000
IPR018152Superoxide dismutase, copper/zinc, binding site3 (1.06%)0001011000
IPR027329TPX2, C-terminal domain3 (1.06%)0000210000
IPR0068285-AMP-activated protein kinase, beta subunit, interaction domain2 (0.71%)0000020000
IPR017956AT hook, DNA-binding motif2 (0.71%)0000000002
IPR001469ATPase, F1 complex, delta/epsilon subunit2 (0.71%)0000011000
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminal2 (0.71%)0000011000
IPR002068Alpha crystallin/Hsp20 domain2 (0.71%)0000200000
IPR003676Auxin-induced protein, ARG72 (0.71%)0000100001
IPR010420CASTOR/POLLUX/SYM8 ion channels2 (0.71%)0000001001
IPR001580Calreticulin/calnexin2 (0.71%)0000000110
IPR009033Calreticulin/calnexin, P domain2 (0.71%)0000000110
IPR018124Calreticulin/calnexin, conserved site2 (0.71%)0000000110
IPR002939Chaperone DnaJ, C-terminal2 (0.71%)0001100000
IPR001623DnaJ domain2 (0.71%)0001100000
IPR018253DnaJ domain, conserved site2 (0.71%)0001100000
IPR005175Domain of unknown function DUF2962 (0.71%)0000000002
IPR001810F-box domain2 (0.71%)0000200000
IPR000782FAS1 domain2 (0.71%)0000101000
IPR002713FF domain2 (0.71%)0000000110
IPR001519Ferritin2 (0.71%)0000011000
IPR014034Ferritin, conserved site2 (0.71%)0000011000
IPR009040Ferritin- like diiron domain2 (0.71%)0000011000
IPR009078Ferritin-like superfamily2 (0.71%)0000011000
IPR012347Ferritin-related2 (0.71%)0000011000
IPR008331Ferritin/DPS protein domain2 (0.71%)0000011000
IPR013781Glycoside hydrolase, catalytic domain2 (0.71%)0000001001
IPR006710Glycoside hydrolase, family 432 (0.71%)0000000110
IPR023296Glycosyl hydrolase, five-bladed beta-propellor domain2 (0.71%)0000000110
IPR008971HSP40/DnaJ peptide-binding2 (0.71%)0001100000
IPR001356Homeobox domain2 (0.71%)0010100000
IPR014756Immunoglobulin E-set2 (0.71%)0000020000
IPR002652Importin-alpha, importin-beta-binding domain2 (0.71%)0000200000
IPR001494Importin-beta, N-terminal domain2 (0.71%)0000000002
IPR002283Isopenicillin N synthase2 (0.71%)0001010000
IPR027443Isopenicillin N synthase-like2 (0.71%)0001010000
IPR004087K Homology domain2 (0.71%)0000010001
IPR004088K Homology domain, type 12 (0.71%)0000010001
IPR002882LPPG:FO 2-phospho-L-lactate transferase CofD/UPF00522 (0.71%)0000100001
IPR025875Leucine rich repeat 42 (0.71%)0000010001
IPR001611Leucine-rich repeat2 (0.71%)0000010001
IPR006553Leucine-rich repeat, cysteine-containing subtype2 (0.71%)0000200000
IPR016196Major facilitator superfamily domain, general substrate transporter2 (0.71%)1000010000
IPR003441NAC domain2 (0.71%)0000001001
IPR001509NAD-dependent epimerase/dehydratase2 (0.71%)0001010000
IPR026992Non-haem dioxygenase N-terminal domain2 (0.71%)0001010000
IPR003323Ovarian tumour, otubain2 (0.71%)0000000002
IPR005123Oxoglutarate/iron-dependent dioxygenase2 (0.71%)0001010000
IPR013227PAN-2 domain2 (0.71%)0001001000
IPR002885Pentatricopeptide repeat2 (0.71%)0000020000
IPR001056Photosystem II PsbH, phosphoprotein2 (0.71%)0000000110
IPR027237Pre-mRNA-processing protein PRP402 (0.71%)0000000110
IPR022251Protein of unknown function wound-induced2 (0.71%)0000200000
IPR000858S-locus glycoprotein2 (0.71%)0000001001
IPR004027SEC-C motif2 (0.71%)0000001001
IPR005746Thioredoxin2 (0.71%)0100010000
IPR013766Thioredoxin domain2 (0.71%)0100010000
IPR017887Transcription factor TCP subgroup2 (0.71%)0000020000
IPR005333Transcription factor, TCP2 (0.71%)0000020000
IPR006577UAS2 (0.71%)0000001001
IPR001012UBX2 (0.71%)0000001001
IPR019775WD40 repeat, conserved site2 (0.71%)0000001001
IPR001202WW domain2 (0.71%)0000000110
IPR007275YTH domain2 (0.71%)0000200000
IPR000315Zinc finger, B-box2 (0.71%)0010100000
IPR001965Zinc finger, PHD-type2 (0.71%)1100000000
IPR011527ABC transporter type 1, transmembrane domain1 (0.35%)0000100000
IPR001140ABC transporter, transmembrane domain1 (0.35%)0000100000
IPR013525ABC-2 type transporter1 (0.35%)0000010000
IPR004304Acetamidase/Formamidase1 (0.35%)0100000000
IPR016035Acyl transferase/acyl hydrolase/lysophospholipase1 (0.35%)0000000001
IPR016181Acyl-CoA N-acyltransferase1 (0.35%)0000010000
IPR006089Acyl-CoA dehydrogenase, conserved site1 (0.35%)0010000000
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminal1 (0.35%)0010000000
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminal1 (0.35%)0010000000
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain1 (0.35%)0010000000
IPR006091Acyl-CoA oxidase/dehydrogenase, central domain1 (0.35%)0010000000
IPR002466Adenosine deaminase/editase1 (0.35%)1000000000
IPR003609Apple-like1 (0.35%)0000001000
IPR004776Auxin efflux carrier1 (0.35%)0000000001
IPR014024Auxin efflux carrier, plant type1 (0.35%)0000000001
IPR024097Basic helix-loop-helix leucine zipper transcription factor1 (0.35%)0000000001
IPR024102Basic helix-loop-helix leucine zipper transcription factor, plant1 (0.35%)0000000001
IPR008264Beta-glucanase1 (0.35%)0000010000
IPR003142Biotin protein ligase, C-terminal1 (0.35%)0000010000
IPR004408Biotin--acetyl-CoA-carboxylase ligase1 (0.35%)0000010000
IPR004143Biotin/lipoate A/B protein ligase1 (0.35%)0000010000
IPR001487Bromodomain1 (0.35%)0000010000
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 21 (0.35%)0000010000
IPR012724Chaperone DnaJ1 (0.35%)0000100000
IPR003101Coactivator CBP, KIX domain1 (0.35%)0000100000
IPR006692Coatomer, WD associated region1 (0.35%)0000100000
IPR015801Copper amine oxidase, N2/N3-terminal1 (0.35%)0000001000
IPR013763Cyclin-like1 (0.35%)0010000000
IPR002130Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain1 (0.35%)0000100000
IPR015345Cytokinin dehydrogenase 1, FAD/cytokinin binding domain1 (0.35%)0000010000
IPR003840DNA helicase1 (0.35%)0000100000
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal1 (0.35%)0000001000
IPR004314Domain of unknown function DUF2391 (0.35%)0000000010
IPR019446Domain of unknown function DUF24311 (0.35%)0000100000
IPR025344Domain of unknown function DUF41011 (0.35%)0000100000
IPR025521Domain of unknown function DUF44091 (0.35%)0000000010
IPR006868Domain of unknown function DUF6301 (0.35%)0000001000
IPR006867Domain of unknown function DUF6321 (0.35%)0000001000
IPR008579Domain of unknown function DUF861, cupin-31 (0.35%)0000001000
IPR001372Dynein light chain, type 1/21 (0.35%)0000010000
IPR005539ELK1 (0.35%)0000100000
IPR004342EXS, C-terminal1 (0.35%)0000010000
IPR008990Electron transport accessory protein-like domain1 (0.35%)0001000000
IPR019542Enhancer of polycomb-like, N-terminal1 (0.35%)0010000000
IPR000742Epidermal growth factor-like domain1 (0.35%)0000001000
IPR006094FAD linked oxidase, N-terminal1 (0.35%)0000010000
IPR016166FAD-binding, type 21 (0.35%)0000010000
IPR016167FAD-binding, type 2, subdomain 11 (0.35%)0000010000
IPR016164FAD-linked oxidase-like, C-terminal1 (0.35%)0000010000
IPR015425Formin, FH2 domain1 (0.35%)0000010000
IPR027643Formin-like family, viridiplantae1 (0.35%)0000010000
IPR000467G-patch domain1 (0.35%)0000000010
IPR021151GINS complex1 (0.35%)0000010000
IPR008591GINS complex, subunit Sld51 (0.35%)0000010000
IPR000182GNAT domain1 (0.35%)0000010000
IPR014978Glutamine-Leucine-Glutamine, QLQ1 (0.35%)0000000001
IPR000757Glycoside hydrolase, family 161 (0.35%)0000010000
IPR000490Glycoside hydrolase, family 171 (0.35%)0000000001
IPR000726Glycoside hydrolase, family 19, catalytic1 (0.35%)0000010000
IPR017853Glycoside hydrolase, superfamily1 (0.35%)0000000001
IPR002415H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote1 (0.35%)0000010000
IPR008906HAT dimerisation domain, C-terminal1 (0.35%)0000010000
IPR000357HEAT1 (0.35%)0000000001
IPR010255Haem peroxidase1 (0.35%)0000000100
IPR002016Haem peroxidase, plant/fungal/bacterial1 (0.35%)0000000100
IPR001305Heat shock protein DnaJ, cysteine-rich domain1 (0.35%)0000100000
IPR001650Helicase, C-terminal1 (0.35%)0000001000
IPR014001Helicase, superfamily 1/2, ATP-binding domain1 (0.35%)0000001000
IPR009071High mobility group box domain1 (0.35%)0000010000
IPR002119Histone H2A1 (0.35%)0000000001
IPR007125Histone core1 (0.35%)0000000001
IPR009072Histone-fold1 (0.35%)0000000001
IPR008422Homeobox KN domain1 (0.35%)0000100000
IPR017970Homeobox, conserved site1 (0.35%)0000100000
IPR011684KIP1-like1 (0.35%)0000001000
IPR005540KNOX11 (0.35%)0000100000
IPR005541KNOX21 (0.35%)0000100000
IPR001752Kinesin, motor domain1 (0.35%)0100000000
IPR027640Kinesin-like protein1 (0.35%)0100000000
IPR004883Lateral organ boundaries, LOB1 (0.35%)0100000000
IPR023346Lysozyme-like domain1 (0.35%)0000010000
IPR011701Major facilitator superfamily1 (0.35%)1000000000
IPR020846Major facilitator superfamily domain1 (0.35%)1000000000
IPR027353NET domain1 (0.35%)0000010000
IPR007282NOT2/NOT3/NOT51 (0.35%)1000000000
IPR007231Nucleoporin interacting component Nup93/Nic961 (0.35%)0001000000
IPR006093Oxygen oxidoreductase covalent FAD-binding site1 (0.35%)0000010000
IPR026057PC-Esterase1 (0.35%)0000000100
IPR002641Patatin/Phospholipase A2-related1 (0.35%)0000000001
IPR018200Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site1 (0.35%)0000010000
IPR008758Peptidase S281 (0.35%)0000010000
IPR023827Peptidase S8, subtilisin, Asp-active site1 (0.35%)0000000001
IPR015500Peptidase S8, subtilisin-related1 (0.35%)0000000001
IPR000209Peptidase S8/S53 domain1 (0.35%)0000000001
IPR001375Peptidase S9, prolyl oligopeptidase, catalytic domain1 (0.35%)0000010000
IPR002469Peptidase S9B, dipeptidylpeptidase IV N-terminal1 (0.35%)0000010000
IPR019794Peroxidase, active site1 (0.35%)0000000100
IPR019793Peroxidases heam-ligand binding site1 (0.35%)0000000100
IPR004843Phosphoesterase domain1 (0.35%)0000010000
IPR003375Photosystem I PsaE, reaction centre subunit IV1 (0.35%)0001000000
IPR023618Photosystem I PsaG/PsaK domain1 (0.35%)0001000000
IPR000549Photosystem I PsaG/PsaK protein1 (0.35%)0001000000
IPR017493Photosystem I PsaK, reaction centre, plant1 (0.35%)0001000000
IPR003398Photosystem II PsbN1 (0.35%)0000000010
IPR000270Phox/Bem1p1 (0.35%)0000000010
IPR000823Plant peroxidase1 (0.35%)0000000100
IPR025799Protein arginine N-methyltransferase1 (0.35%)0100000000
IPR021602Protein of unknown function DUF32231 (0.35%)0000001000
IPR008480Protein of unknown function DUF761, plant1 (0.35%)0000010000
IPR003774Protein of unknown function UPF03011 (0.35%)0000100000
IPR015655Protein phosphatase 2C1 (0.35%)0000000001
IPR001932Protein phosphatase 2C (PP2C)-like domain1 (0.35%)0000000001
IPR000222Protein phosphatase 2C, manganese/magnesium aspartate binding site1 (0.35%)0000000001
IPR014014RNA helicase, DEAD-box type, Q motif1 (0.35%)0000001000
IPR007080RNA polymerase Rpb1, domain 11 (0.35%)0000001000
IPR007083RNA polymerase Rpb1, domain 41 (0.35%)0000001000
IPR006592RNA polymerase, N-terminal1 (0.35%)0000001000
IPR000722RNA polymerase, alpha subunit1 (0.35%)0000001000
IPR028309Retinoblastoma protein family1 (0.35%)0010000000
IPR002720Retinoblastoma-associated protein, A-box1 (0.35%)0010000000
IPR002719Retinoblastoma-associated protein, B-box1 (0.35%)0010000000
IPR024599Retinoblastoma-associated protein, N-terminal1 (0.35%)0010000000
IPR012337Ribonuclease H-like domain1 (0.35%)0000010000
IPR004037Ribosomal protein L7Ae conserved site1 (0.35%)0000010000
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd451 (0.35%)0000010000
IPR018492Ribosomal protein L7Ae/L8/Nhp2 family1 (0.35%)0000010000
IPR000685Ribulose bisphosphate carboxylase, large subunit, C-terminal1 (0.35%)0010000000
IPR017444Ribulose bisphosphate carboxylase, large subunit, N-terminal1 (0.35%)0010000000
IPR017443Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal1 (0.35%)0010000000
IPR014729Rossmann-like alpha/beta/alpha sandwich fold1 (0.35%)0000001000
IPR021820S-locus receptor kinase, C-terminal1 (0.35%)0000001000
IPR004331SPX, N-terminal1 (0.35%)0000010000
IPR023393START-like domain1 (0.35%)1000000000
IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase1 (0.35%)0000010000
IPR027944Sieve element occlusion, C-terminal1 (0.35%)0000001000
IPR027942Sieve element occlusion, N-terminal1 (0.35%)0000001000
IPR009917Steroid receptor RNA activator-protein/coat protein complex II, Sec311 (0.35%)0000000001
IPR005031Streptomyces cyclase/dehydrase1 (0.35%)1000000000
IPR019734Tetratricopeptide repeat1 (0.35%)0000000010
IPR013026Tetratricopeptide repeat-containing domain1 (0.35%)0000000010
IPR017937Thioredoxin, conserved site1 (0.35%)0100000000
IPR005202Transcription factor GRAS1 (0.35%)0000100000
IPR004333Transcription factor, SBP-box1 (0.35%)0000100000
IPR003613U box domain1 (0.35%)0000010000
IPR009060UBA-like1 (0.35%)0000000001
IPR001394Ubiquitin carboxyl-terminal hydrolases family 21 (0.35%)0000010000
IPR003903Ubiquitin interacting motif1 (0.35%)0000001000
IPR007572Uncharacterised protein family Ycf201 (0.35%)0000100000
IPR006016UspA1 (0.35%)0000001000
IPR016170Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain1 (0.35%)0000010000
IPR014977WRC1 (0.35%)0000000001
IPR006043Xanthine/uracil/vitamin C permease1 (0.35%)0000100000
IPR010713Xyloglucan endo-transglycosylase, C-terminal1 (0.35%)0000010000
IPR006780YABBY protein1 (0.35%)0000010000
IPR015880Zinc finger, C2H2-like1 (0.35%)0000001000
IPR001878Zinc finger, CCHC-type1 (0.35%)0000010000
IPR019786Zinc finger, PHD-type, conserved site1 (0.35%)0100000000
IPR017907Zinc finger, RING-type, conserved site1 (0.35%)0000010000
IPR001876Zinc finger, RanBP2-type1 (0.35%)0000000010
IPR007527Zinc finger, SWIM-type1 (0.35%)0000000100