Gene Ontology terms associated with a binding site

Binding site
Motif_504
Name
LFY
Description
Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins
#Associated genes
282
#Associated GO terms
1358
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding165 (58.51%)5871132361881228
GO:0003824catalytic activity94 (33.33%)47571125115415
GO:1901363heterocyclic compound binding86 (30.50%)1345191893618
GO:0097159organic cyclic compound binding86 (30.50%)1345191893618
GO:0043167ion binding77 (27.30%)45451017115511
GO:0005515protein binding68 (24.11%)3524151263513
GO:0003676nucleic acid binding51 (18.09%)1231121061510
GO:0043169cation binding41 (14.54%)4432397333
GO:0046872metal ion binding41 (14.54%)4432397333
GO:1901265nucleoside phosphate binding38 (13.48%)0114795128
GO:0000166nucleotide binding38 (13.48%)0114795128
GO:0036094small molecule binding38 (13.48%)0114795128
GO:0043168anion binding36 (12.77%)0113784228
GO:0016787hydrolase activity36 (12.77%)12125123118
GO:0097367carbohydrate derivative binding34 (12.06%)0113784118
GO:0005524ATP binding33 (11.70%)0113774118
GO:0030554adenyl nucleotide binding33 (11.70%)0113774118
GO:0032559adenyl ribonucleotide binding33 (11.70%)0113774118
GO:0001882nucleoside binding33 (11.70%)0113774118
GO:0001883purine nucleoside binding33 (11.70%)0113774118
GO:0017076purine nucleotide binding33 (11.70%)0113774118
GO:0032550purine ribonucleoside binding33 (11.70%)0113774118
GO:0035639purine ribonucleoside triphosphate binding33 (11.70%)0113774118
GO:0032555purine ribonucleotide binding33 (11.70%)0113774118
GO:0032549ribonucleoside binding33 (11.70%)0113774118
GO:0032553ribonucleotide binding33 (11.70%)0113774118
GO:0046914transition metal ion binding32 (11.35%)4421366222
GO:0016491oxidoreductase activity27 (9.57%)3432063321
GO:0016740transferase activity26 (9.22%)0102555116
GO:0003677DNA binding24 (8.51%)01201032006
GO:0016817hydrolase activity, acting on acid anhydrides18 (6.38%)0101562003
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides18 (6.38%)0101562003
GO:0016772transferase activity, transferring phosphorus-containing groups18 (6.38%)0002324115
GO:0008270zinc ion binding18 (6.38%)3210333111
GO:0003723RNA binding17 (6.03%)1110231143
GO:0016301kinase activity17 (6.03%)0002323115
GO:0017111nucleoside-triphosphatase activity17 (6.03%)0101562002
GO:0016773phosphotransferase activity, alcohol group as acceptor17 (6.03%)0002323115
GO:0004672protein kinase activity17 (6.03%)0002323115
GO:0016462pyrophosphatase activity17 (6.03%)0101562002
GO:0004674protein serine/threonine kinase activity16 (5.67%)0002323114
GO:0001071nucleic acid binding transcription factor activity12 (4.26%)0110610003
GO:0003700sequence-specific DNA binding transcription factor activity12 (4.26%)0110610003
GO:0016887ATPase activity11 (3.90%)0001242002
GO:0005507copper ion binding11 (3.90%)1210112111
GO:0005215transporter activity11 (3.90%)1001521001
GO:0046983protein dimerization activity10 (3.55%)0200230012
GO:0052716hydroquinone:oxygen oxidoreductase activity9 (3.19%)1210011111
GO:0016679oxidoreductase activity, acting on diphenols and related substances as donors9 (3.19%)1210011111
GO:0016682oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor9 (3.19%)1210011111
GO:0022892substrate-specific transporter activity9 (3.19%)1001321001
GO:0016798hydrolase activity, acting on glycosyl bonds8 (2.84%)0011021111
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds8 (2.84%)0011021111
GO:0005198structural molecule activity8 (2.84%)0110100131
GO:0019843rRNA binding7 (2.48%)0110000131
GO:0003735structural constituent of ribosome7 (2.48%)0110000131
GO:0030246carbohydrate binding6 (2.13%)0000113001
GO:0048037cofactor binding6 (2.13%)0011121000
GO:0016667oxidoreductase activity, acting on a sulfur group of donors6 (2.13%)2200011000
GO:0051213dioxygenase activity5 (1.77%)0011010110
GO:0008233peptidase activity5 (1.77%)0000030002
GO:0070011peptidase activity, acting on L-amino acid peptides5 (1.77%)0000030002
GO:0043565sequence-specific DNA binding5 (1.77%)0110300000
GO:0016757transferase activity, transferring glycosyl groups5 (1.77%)0000121001
GO:0016758transferase activity, transferring hexosyl groups5 (1.77%)0000121001
GO:00465091,2-diacylglycerol 3-beta-galactosyltransferase activity4 (1.42%)0000111001
GO:0042623ATPase activity, coupled4 (1.42%)0000112000
GO:0035250UDP-galactosyltransferase activity4 (1.42%)0000111001
GO:0008194UDP-glycosyltransferase activity4 (1.42%)0000111001
GO:0022804active transmembrane transporter activity4 (1.42%)1000111000
GO:0016209antioxidant activity4 (1.42%)0001011100
GO:0003682chromatin binding4 (1.42%)0000400000
GO:0050662coenzyme binding4 (1.42%)0011020000
GO:0019899enzyme binding4 (1.42%)0000000112
GO:0015245fatty acid transporter activity4 (1.42%)0001110001
GO:0008378galactosyltransferase activity4 (1.42%)0000111001
GO:0004386helicase activity4 (1.42%)0000301000
GO:0005506iron ion binding4 (1.42%)0001021000
GO:0016874ligase activity4 (1.42%)0000130000
GO:0005319lipid transporter activity4 (1.42%)0001110001
GO:0016651oxidoreductase activity, acting on NAD(P)H4 (1.42%)2100001000
GO:0016668oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor4 (1.42%)2100001000
GO:0047134protein-disulfide reductase activity4 (1.42%)2100001000
GO:0022857transmembrane transporter activity4 (1.42%)1000111000
GO:0051082unfolded protein binding4 (1.42%)0001100110
GO:0043492ATPase activity, coupled to movement of substances3 (1.06%)0000111000
GO:0042626ATPase activity, coupled to transmembrane movement of substances3 (1.06%)0000111000
GO:0003678DNA helicase activity3 (1.06%)0000300000
GO:0015405P-P-bond-hydrolysis-driven transmembrane transporter activity3 (1.06%)0000111000
GO:0008324cation transmembrane transporter activity3 (1.06%)1000011000
GO:0047800cysteamine dioxygenase activity3 (1.06%)0010000110
GO:0030234enzyme regulator activity3 (1.06%)0100010100
GO:0016820hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances3 (1.06%)0000111000
GO:0016788hydrolase activity, acting on ester bonds3 (1.06%)0000010002
GO:0042802identical protein binding3 (1.06%)0100010001
GO:0015075ion transmembrane transporter activity3 (1.06%)1000011000
GO:0016879ligase activity, forming carbon-nitrogen bonds3 (1.06%)0000030000
GO:0016701oxidoreductase activity, acting on single donors with incorporation of molecular oxygen3 (1.06%)0010000110
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen3 (1.06%)0010000110
GO:0016721oxidoreductase activity, acting on superoxide radicals as acceptor3 (1.06%)0001011000
GO:0015399primary active transmembrane transporter activity3 (1.06%)0000111000
GO:0046982protein heterodimerization activity3 (1.06%)0200000001
GO:0017171serine hydrolase activity3 (1.06%)0000020001
GO:0008236serine-type peptidase activity3 (1.06%)0000020001
GO:0022891substrate-specific transmembrane transporter activity3 (1.06%)1000011000
GO:0004784superoxide dismutase activity3 (1.06%)0001011000
GO:0042625ATPase activity, coupled to transmembrane movement of ions2 (0.71%)0000011000
GO:0044769ATPase activity, coupled to transmembrane movement of ions, rotational mechanism2 (0.71%)0000011000
GO:0051020GTPase binding2 (0.71%)0000000002
GO:0070063RNA polymerase binding2 (0.71%)0000000110
GO:0008536Ran GTPase binding2 (0.71%)0000000002
GO:0017016Ras GTPase binding2 (0.71%)0000000002
GO:0016881acid-amino acid ligase activity2 (0.71%)0000020000
GO:0060090binding, bridging2 (0.71%)0000001001
GO:0005509calcium ion binding2 (0.71%)0000000110
GO:0019829cation-transporting ATPase activity2 (0.71%)0000011000
GO:0008234cysteine-type peptidase activity2 (0.71%)0000010001
GO:0008092cytoskeletal protein binding2 (0.71%)0101000000
GO:0015036disulfide oxidoreductase activity2 (0.71%)0100010000
GO:0008047enzyme activator activity2 (0.71%)0100010000
GO:0008199ferric iron binding2 (0.71%)0000011000
GO:0050660flavin adenine dinucleotide binding2 (0.71%)0010010000
GO:0045544gibberellin 20-oxidase activity2 (0.71%)0001010000
GO:0031072heat shock protein binding2 (0.71%)0001100000
GO:0015078hydrogen ion transmembrane transporter activity2 (0.71%)0000011000
GO:0036442hydrogen-exporting ATPase activity2 (0.71%)0000011000
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2 (0.71%)1100000000
GO:0022890inorganic cation transmembrane transporter activity2 (0.71%)0000011000
GO:0015077monovalent inorganic cation transmembrane transporter activity2 (0.71%)0000011000
GO:0016614oxidoreductase activity, acting on CH-OH group of donors2 (0.71%)0000020000
GO:0016671oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2 (0.71%)0100010000
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2 (0.71%)0001010000
GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2 (0.71%)0001010000
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor2 (0.71%)0000020000
GO:0042301phosphate ion binding2 (0.71%)0000000110
GO:0044183protein binding involved in protein folding2 (0.71%)0000200000
GO:0030674protein binding, bridging2 (0.71%)0000001001
GO:0015035protein disulfide oxidoreductase activity2 (0.71%)0100010000
GO:0042803protein homodimerization activity2 (0.71%)0100010000
GO:0043621protein self-association2 (0.71%)0000101000
GO:0008565protein transporter activity2 (0.71%)0000200000
GO:0046933proton-transporting ATP synthase activity, rotational mechanism2 (0.71%)0000011000
GO:0046961proton-transporting ATPase activity, rotational mechanism2 (0.71%)0000011000
GO:0031267small GTPase binding2 (0.71%)0000000002
GO:0019787small conjugating protein ligase activity2 (0.71%)0000020000
GO:0046906tetrapyrrole binding2 (0.71%)0001000100
GO:0016746transferase activity, transferring acyl groups2 (0.71%)0000110000
GO:0015631tubulin binding2 (0.71%)0101000000
GO:0004842ubiquitin-protein ligase activity2 (0.71%)0000020000
GO:00038532-methylacyl-CoA dehydrogenase activity1 (0.35%)0010000000
GO:00038543-beta-hydroxy-delta5-steroid dehydrogenase activity1 (0.35%)0000010000
GO:0003878ATP citrate synthase activity1 (0.35%)0000100000
GO:0008026ATP-dependent helicase activity1 (0.35%)0000001000
GO:0016405CoA-ligase activity1 (0.35%)0000100000
GO:0003899DNA-directed RNA polymerase activity1 (0.35%)0000001000
GO:0008080N-acetyltransferase activity1 (0.35%)0000010000
GO:0016410N-acyltransferase activity1 (0.35%)0000010000
GO:0008170N-methyltransferase activity1 (0.35%)0100000000
GO:0034062RNA polymerase activity1 (0.35%)0000001000
GO:0008757S-adenosylmethionine-dependent methyltransferase activity1 (0.35%)0100000000
GO:0008762UDP-N-acetylmuramate dehydrogenase activity1 (0.35%)0000010000
GO:0016277[myelin basic protein]-arginine N-methyltransferase activity1 (0.35%)0100000000
GO:0016407acetyltransferase activity1 (0.35%)0000010000
GO:0016878acid-thiol ligase activity1 (0.35%)0000100000
GO:0003995acyl-CoA dehydrogenase activity1 (0.35%)0010000000
GO:0004000adenosine deaminase activity1 (0.35%)1000000000
GO:0016273arginine N-methyltransferase activity1 (0.35%)0100000000
GO:0048487beta-tubulin binding1 (0.35%)0001000000
GO:0004077biotin-[acetyl-CoA-carboxylase] ligase activity1 (0.35%)0000010000
GO:0004078biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity1 (0.35%)0000010000
GO:0018271biotin-protein ligase activity1 (0.35%)0000010000
GO:0005516calmodulin binding1 (0.35%)0000100000
GO:0015144carbohydrate transmembrane transporter activity1 (0.35%)1000000000
GO:1901476carbohydrate transporter activity1 (0.35%)1000000000
GO:0016830carbon-carbon lyase activity1 (0.35%)0010000000
GO:0016831carboxy-lyase activity1 (0.35%)0010000000
GO:0052689carboxylic ester hydrolase activity1 (0.35%)0000000001
GO:0005402cation:sugar symporter activity1 (0.35%)1000000000
GO:0008061chitin binding1 (0.35%)0000010000
GO:0004568chitinase activity1 (0.35%)0000010000
GO:0016168chlorophyll binding1 (0.35%)0001000000
GO:0016859cis-trans isomerase activity1 (0.35%)0000100000
GO:0050897cobalt ion binding1 (0.35%)0000100000
GO:0019139cytokinin dehydrogenase activity1 (0.35%)0000010000
GO:0019239deaminase activity1 (0.35%)1000000000
GO:0009055electron carrier activity1 (0.35%)0000010000
GO:0004175endopeptidase activity1 (0.35%)0000000001
GO:0004866endopeptidase inhibitor activity1 (0.35%)0000000100
GO:0061135endopeptidase regulator activity1 (0.35%)0000000100
GO:0004857enzyme inhibitor activity1 (0.35%)0000000100
GO:0004322ferroxidase activity1 (0.35%)0000000100
GO:0047714galactolipase activity1 (0.35%)0000000001
GO:0020037heme binding1 (0.35%)0000000100
GO:0042054histone methyltransferase activity1 (0.35%)0100000000
GO:0008469histone-arginine N-methyltransferase activity1 (0.35%)0100000000
GO:0016814hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines1 (0.35%)1000000000
GO:0016811hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1 (0.35%)0100000000
GO:0016853isomerase activity1 (0.35%)0000100000
GO:0008470isovaleryl-CoA dehydrogenase activity1 (0.35%)0010000000
GO:0016877ligase activity, forming carbon-sulfur bonds1 (0.35%)0000100000
GO:0016298lipase activity1 (0.35%)0000000001
GO:0016829lyase activity1 (0.35%)0010000000
GO:0000287magnesium ion binding1 (0.35%)0010000000
GO:0008168methyltransferase activity1 (0.35%)0100000000
GO:0008017microtubule binding1 (0.35%)0100000000
GO:0003777microtubule motor activity1 (0.35%)0100000000
GO:0060089molecular transducer activity1 (0.35%)0000000100
GO:0003774motor activity1 (0.35%)0100000000
GO:0016779nucleotidyltransferase activity1 (0.35%)0000001000
GO:0016684oxidoreductase activity, acting on peroxide as acceptor1 (0.35%)0000000100
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors1 (0.35%)0010000000
GO:0016645oxidoreductase activity, acting on the CH-NH group of donors1 (0.35%)0000010000
GO:0016722oxidoreductase activity, oxidizing metal ions1 (0.35%)0000000100
GO:0016724oxidoreductase activity, oxidizing metal ions, oxygen as acceptor1 (0.35%)0000000100
GO:0030414peptidase inhibitor activity1 (0.35%)0000000100
GO:0061134peptidase regulator activity1 (0.35%)0000000100
GO:0003755peptidyl-prolyl cis-trans isomerase activity1 (0.35%)0000100000
GO:0004601peroxidase activity1 (0.35%)0000000100
GO:0016791phosphatase activity1 (0.35%)0000000001
GO:0004620phospholipase activity1 (0.35%)0000000001
GO:0004721phosphoprotein phosphatase activity1 (0.35%)0000000001
GO:0042578phosphoric ester hydrolase activity1 (0.35%)0000000001
GO:0000988protein binding transcription factor activity1 (0.35%)0000100000
GO:0032403protein complex binding1 (0.35%)0100000000
GO:0008276protein methyltransferase activity1 (0.35%)0100000000
GO:0004722protein serine/threonine phosphatase activity1 (0.35%)0000000001
GO:0016274protein-arginine N-methyltransferase activity1 (0.35%)0100000000
GO:0035242protein-arginine omega-N asymmetric methyltransferase activity1 (0.35%)0100000000
GO:0035241protein-arginine omega-N monomethyltransferase activity1 (0.35%)0100000000
GO:0070035purine NTP-dependent helicase activity1 (0.35%)0000001000
GO:0048038quinone binding1 (0.35%)0000001000
GO:0004872receptor activity1 (0.35%)0000000100
GO:0016984ribulose-bisphosphate carboxylase activity1 (0.35%)0010000000
GO:0015291secondary active transmembrane transporter activity1 (0.35%)1000000000
GO:0004252serine-type endopeptidase activity1 (0.35%)0000000001
GO:0004867serine-type endopeptidase inhibitor activity1 (0.35%)0000000100
GO:0004871signal transducer activity1 (0.35%)0000000100
GO:0038023signaling receptor activity1 (0.35%)0000000100
GO:0019783small conjugating protein-specific protease activity1 (0.35%)0000010000
GO:0015294solute:cation symporter activity1 (0.35%)1000000000
GO:0015295solute:hydrogen symporter activity1 (0.35%)1000000000
GO:0016229steroid dehydrogenase activity1 (0.35%)0000010000
GO:0033764steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor1 (0.35%)0000010000
GO:0004775succinate-CoA ligase (ADP-forming) activity1 (0.35%)0000100000
GO:0004774succinate-CoA ligase activity1 (0.35%)0000100000
GO:0051119sugar transmembrane transporter activity1 (0.35%)1000000000
GO:0005351sugar:hydrogen symporter activity1 (0.35%)1000000000
GO:0015293symporter activity1 (0.35%)1000000000
GO:0016790thiolester hydrolase activity1 (0.35%)0000010000
GO:0003712transcription cofactor activity1 (0.35%)0000100000
GO:0008134transcription factor binding1 (0.35%)0010000000
GO:0000989transcription factor binding transcription factor activity1 (0.35%)0000100000
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups1 (0.35%)0000010000
GO:0046912transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer1 (0.35%)0000100000
GO:0016741transferase activity, transferring one-carbon groups1 (0.35%)0100000000
GO:0019199transmembrane receptor protein kinase activity1 (0.35%)0000000100
GO:0004675transmembrane receptor protein serine/threonine kinase activity1 (0.35%)0000000100
GO:0004888transmembrane signaling receptor activity1 (0.35%)0000000100
GO:0004221ubiquitin thiolesterase activity1 (0.35%)0000010000
GO:0004843ubiquitin-specific protease activity1 (0.35%)0000010000
GO:0016762xyloglucan:xyloglucosyl transferase activity1 (0.35%)0000010000

Cellular Component (back to top)

Click table-header(s) to enable sorting
GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell130 (46.10%)7861025271451018
GO:0044464cell part130 (46.10%)7861025271451018
GO:0005622intracellular128 (45.39%)7761025261451018
GO:0044424intracellular part124 (43.97%)7751024261351017
GO:0043229intracellular organelle115 (40.78%)77592323135815
GO:0043226organelle115 (40.78%)77592323135815
GO:0043231intracellular membrane-bounded organelle111 (39.36%)76592321135715
GO:0043227membrane-bounded organelle111 (39.36%)76592321135715
GO:0005737cytoplasm85 (30.14%)4548141895810
GO:0044444cytoplasmic part80 (28.37%)4446131795810
GO:0044446intracellular organelle part60 (21.28%)25468128456
GO:0044422organelle part60 (21.28%)25468128456
GO:0005634nucleus54 (19.15%)63231686028
GO:0009536plastid48 (17.02%)34237115445
GO:0009507chloroplast47 (16.67%)34237105445
GO:0016020membrane47 (16.67%)41169104237
GO:0044435plastid part38 (13.48%)2423565335
GO:0044434chloroplast part37 (13.12%)2423465335
GO:0031975envelope37 (13.12%)2322856225
GO:0031967organelle envelope37 (13.12%)2322856225
GO:0032991macromolecular complex31 (10.99%)0223662262
GO:0009526plastid envelope30 (10.64%)2321544225
GO:0009941chloroplast envelope29 (10.28%)2321444225
GO:0043234protein complex22 (7.80%)0113642131
GO:0044425membrane part18 (6.38%)2003531121
GO:0043232intracellular non-membrane-bounded organelle17 (6.03%)0210350132
GO:0043228non-membrane-bounded organelle17 (6.03%)0210350132
GO:0009570chloroplast stroma15 (5.32%)0212041122
GO:0005829cytosol15 (5.32%)0011530023
GO:0005576extracellular region15 (5.32%)1211043111
GO:0009532plastid stroma15 (5.32%)0212041122
GO:0071944cell periphery14 (4.96%)0103320113
GO:0009579thylakoid14 (4.96%)0103051121
GO:0048046apoplast13 (4.61%)1211032111
GO:0070013intracellular organelle lumen13 (4.61%)0022331011
GO:0031974membrane-enclosed lumen13 (4.61%)0022331011
GO:0044428nuclear part13 (4.61%)0012332011
GO:0043233organelle lumen13 (4.61%)0022331011
GO:0031090organelle membrane12 (4.26%)0010323111
GO:0016021integral to membrane11 (3.90%)2001320111
GO:0031224intrinsic to membrane11 (3.90%)2001320111
GO:0031981nuclear lumen11 (3.90%)0011331011
GO:0030054cell junction10 (3.55%)2101201111
GO:0005911cell-cell junction10 (3.55%)2101201111
GO:0009534chloroplast thylakoid10 (3.55%)0102040111
GO:0005739mitochondrion10 (3.55%)1010131111
GO:0031984organelle subcompartment10 (3.55%)0102040111
GO:0009506plasmodesma10 (3.55%)2101201111
GO:0031976plastid thylakoid10 (3.55%)0102040111
GO:0055044symplast10 (3.55%)2101201111
GO:0034357photosynthetic membrane9 (3.19%)0002030121
GO:0005886plasma membrane9 (3.19%)0003110112
GO:0044436thylakoid part9 (3.19%)0002030121
GO:0009535chloroplast thylakoid membrane8 (2.84%)0002030111
GO:0005783endoplasmic reticulum8 (2.84%)0002111111
GO:0055035plastid thylakoid membrane8 (2.84%)0002030111
GO:0030529ribonucleoprotein complex8 (2.84%)0110010131
GO:0042651thylakoid membrane8 (2.84%)0002030111
GO:0005618cell wall7 (2.48%)0100210111
GO:0030312external encapsulating structure7 (2.48%)0100210111
GO:0005840ribosome7 (2.48%)0110000131
GO:1902494catalytic complex6 (2.13%)0010211100
GO:0015934large ribosomal subunit6 (2.13%)0110000121
GO:0005730nucleolus6 (2.13%)0000320001
GO:0000315organellar large ribosomal subunit6 (2.13%)0110000121
GO:0000313organellar ribosome6 (2.13%)0110000121
GO:0000311plastid large ribosomal subunit6 (2.13%)0110000121
GO:0042170plastid membrane6 (2.13%)0010211001
GO:0009547plastid ribosome6 (2.13%)0110000121
GO:0044391ribosomal subunit6 (2.13%)0110000121
GO:0031969chloroplast membrane5 (1.77%)0010111001
GO:0009707chloroplast outer membrane5 (1.77%)0010111001
GO:0005654nucleoplasm5 (1.77%)0011011010
GO:0044451nucleoplasm part5 (1.77%)0011011010
GO:0031968organelle outer membrane5 (1.77%)0010111001
GO:0019867outer membrane5 (1.77%)0010111001
GO:0009521photosystem5 (1.77%)0002000120
GO:0009527plastid outer membrane5 (1.77%)0010111001
GO:0012505endomembrane system4 (1.42%)0001201000
GO:0044429mitochondrial part4 (1.42%)0010111000
GO:0005635nuclear envelope4 (1.42%)0001201000
GO:0019866organelle inner membrane4 (1.42%)0000211000
GO:0010287plastoglobule4 (1.42%)0001020001
GO:0005773vacuole4 (1.42%)0000002110
GO:0005794Golgi apparatus3 (1.06%)0001000110
GO:0044430cytoskeletal part3 (1.06%)0100020000
GO:0005856cytoskeleton3 (1.06%)0100020000
GO:0005740mitochondrial envelope3 (1.06%)0000111000
GO:0005743mitochondrial inner membrane3 (1.06%)0000111000
GO:0031966mitochondrial membrane3 (1.06%)0000111000
GO:0044455mitochondrial membrane part3 (1.06%)0000111000
GO:0005753mitochondrial proton-transporting ATP synthase complex3 (1.06%)0000111000
GO:0005643nuclear pore3 (1.06%)0001200000
GO:0009523photosystem II3 (1.06%)0000000120
GO:0046930pore complex3 (1.06%)0001200000
GO:0045259proton-transporting ATP synthase complex3 (1.06%)0000111000
GO:0016469proton-transporting two-sector ATPase complex3 (1.06%)0000111000
GO:0000151ubiquitin ligase complex3 (1.06%)0000210000
GO:0005774vacuolar membrane3 (1.06%)0000001110
GO:0044437vacuolar part3 (1.06%)0000001110
GO:0019005SCF ubiquitin ligase complex2 (0.71%)0000200000
GO:0044427chromosomal part2 (0.71%)0000010001
GO:0005694chromosome2 (0.71%)0000010001
GO:0031461cullin-RING ubiquitin ligase complex2 (0.71%)0000200000
GO:0005875microtubule associated complex2 (0.71%)0100010000
GO:0015630microtubule cytoskeleton2 (0.71%)0100010000
GO:0000275mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)2 (0.71%)0000011000
GO:0009522photosystem I2 (0.71%)0002000000
GO:0009505plant-type cell wall2 (0.71%)0000000110
GO:0032993protein-DNA complex2 (0.71%)0000010001
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)2 (0.71%)0000011000
GO:0033178proton-transporting two-sector ATPase complex, catalytic domain2 (0.71%)0000011000
GO:1990234transferase complex2 (0.71%)0010001000
GO:1990104DNA bending complex1 (0.35%)0000000001
GO:0044815DNA packaging complex1 (0.35%)0000000001
GO:0031261DNA replication preinitiation complex1 (0.35%)0000010000
GO:0000418DNA-directed RNA polymerase IV complex1 (0.35%)0000001000
GO:0000428DNA-directed RNA polymerase complex1 (0.35%)0000001000
GO:0000811GINS complex1 (0.35%)0000010000
GO:0043189H4/H2A histone acetyltransferase complex1 (0.35%)0010000000
GO:0035267NuA4 histone acetyltransferase complex1 (0.35%)0010000000
GO:0032777Piccolo NuA4 histone acetyltransferase complex1 (0.35%)0010000000
GO:0030880RNA polymerase complex1 (0.35%)0000001000
GO:1902493acetyltransferase complex1 (0.35%)0010000000
GO:0015629actin cytoskeleton1 (0.35%)0000010000
GO:0005884actin filament1 (0.35%)0000010000
GO:0000785chromatin1 (0.35%)0000000001
GO:0048475coated membrane1 (0.35%)0000100000
GO:0005788endoplasmic reticulum lumen1 (0.35%)0001000000
GO:0044432endoplasmic reticulum part1 (0.35%)0001000000
GO:0000123histone acetyltransferase complex1 (0.35%)0010000000
GO:0035061interchromatin granule1 (0.35%)0001000000
GO:0005871kinesin complex1 (0.35%)0100000000
GO:0016592mediator complex1 (0.35%)0000000010
GO:0030117membrane coat1 (0.35%)0000100000
GO:0005759mitochondrial matrix1 (0.35%)0010000000
GO:0005754mitochondrial proton-transporting ATP synthase, catalytic core1 (0.35%)0000001000
GO:0055029nuclear DNA-directed RNA polymerase complex1 (0.35%)0000001000
GO:0016604nuclear body1 (0.35%)0001000000
GO:0000228nuclear chromosome1 (0.35%)0000010000
GO:0044454nuclear chromosome part1 (0.35%)0000010000
GO:0031965nuclear membrane1 (0.35%)0000001000
GO:0016607nuclear speck1 (0.35%)0001000000
GO:0000786nucleosome1 (0.35%)0000000001
GO:1990204oxidoreductase complex1 (0.35%)0000000100
GO:0009538photosystem I reaction center1 (0.35%)0001000000
GO:0009654photosystem II oxygen evolving complex1 (0.35%)0000000100
GO:0009539photosystem II reaction center1 (0.35%)0000000010
GO:0009528plastid inner membrane1 (0.35%)0000100000
GO:0045263proton-transporting ATP synthase complex, coupling factor F(o)1 (0.35%)0000100000
GO:0045267proton-transporting ATP synthase, catalytic core1 (0.35%)0000001000
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain1 (0.35%)0000100000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process143 (50.71%)6771028331361122
GO:0008152metabolic process137 (48.58%)7881023281281221
GO:0071704organic substance metabolic process118 (41.84%)567722241161020
GO:0044237cellular metabolic process117 (41.49%)556922241061119
GO:0044238primary metabolic process98 (34.75%)4356211994819
GO:0044699single-organism process96 (34.04%)57642219113217
GO:0043170macromolecule metabolic process82 (29.08%)3334191674815
GO:0044763single-organism cellular process80 (28.37%)36541717102214
GO:0044260cellular macromolecule metabolic process74 (26.24%)3333191363714
GO:0065007biological regulation59 (20.92%)232516146119
GO:0050896response to stimulus55 (19.50%)5313131171011
GO:0050789regulation of biological process52 (18.44%)132513125119
GO:0044710single-organism metabolic process52 (18.44%)46538106325
GO:0009058biosynthetic process50 (17.73%)2232111151310
GO:1901576organic substance biosynthetic process50 (17.73%)2232111151310
GO:0044249cellular biosynthetic process48 (17.02%)223211951310
GO:0006725cellular aromatic compound metabolic process47 (16.67%)33301385138
GO:1901360organic cyclic compound metabolic process47 (16.67%)33301385138
GO:0050794regulation of cellular process42 (14.89%)122312104008
GO:0010467gene expression41 (14.54%)2231954267
GO:0019538protein metabolic process41 (14.54%)1213783358
GO:0006807nitrogen compound metabolic process40 (14.18%)21301384027
GO:0019222regulation of metabolic process39 (13.83%)12221084118
GO:0044267cellular protein metabolic process38 (13.48%)1213763357
GO:0046483heterocycle metabolic process38 (13.48%)21201374027
GO:0034641cellular nitrogen compound metabolic process37 (13.12%)21201364027
GO:0006139nucleobase-containing compound metabolic process36 (12.77%)