Gene Ontology terms associated with a binding site

Binding site
Motif_384
Name
SITEIOSPCNA
Description
Site I of rice PCNA (proliferating cell nuclear antigen) gene; Found at -201 to -194; Resemble G-box; May contribute in part to transcriptional activation
#Associated genes
208
#Associated GO terms
1166
 
Biological Process
Molecular Function
Cellular Component






Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell95 (45.67%)66412525153514
GO:0044464cell part95 (45.67%)66412525153514
GO:0005622intracellular85 (40.87%)66411423143410
GO:0044424intracellular part78 (37.50%)63410421133410
GO:0043229intracellular organelle71 (34.13%)634742193410
GO:0043226organelle71 (34.13%)634742193410
GO:0043231intracellular membrane-bounded organelle69 (33.17%)634742183310
GO:0043227membrane-bounded organelle69 (33.17%)634742183310
GO:0005737cytoplasm54 (25.96%)32374159326
GO:0044444cytoplasmic part46 (22.12%)32274135325
GO:0016020membrane39 (18.75%)11255115207
GO:0005634nucleus36 (17.31%)4124296017
GO:0009536plastid30 (14.42%)21122122323
GO:0044446intracellular organelle part29 (13.94%)11142103232
GO:0044422organelle part29 (13.94%)11142103232
GO:0009507chloroplast21 (10.10%)2112281211
GO:0032991macromolecular complex21 (10.10%)0015182121
GO:0043234protein complex20 (9.62%)0005182121
GO:0071944cell periphery17 (8.17%)0012232016
GO:0044434chloroplast part16 (7.69%)1112160211
GO:0005886plasma membrane16 (7.69%)0012232006
GO:0044435plastid part16 (7.69%)1112160211
GO:0009579thylakoid14 (6.73%)1111171100
GO:0005829cytosol13 (6.25%)1024113001
GO:0009941chloroplast envelope12 (5.77%)1112130210
GO:0031975envelope12 (5.77%)1112130210
GO:0043232intracellular non-membrane-bounded organelle12 (5.77%)0012133011
GO:0044425membrane part12 (5.77%)0001072101
GO:0043228non-membrane-bounded organelle12 (5.77%)0012133011
GO:0031967organelle envelope12 (5.77%)1112130210
GO:0009526plastid envelope12 (5.77%)1112130210
GO:0044436thylakoid part12 (5.77%)0111161100
GO:0009570chloroplast stroma11 (5.29%)1112130101
GO:0009534chloroplast thylakoid11 (5.29%)0111160100
GO:0031984organelle subcompartment11 (5.29%)0111160100
GO:0034357photosynthetic membrane11 (5.29%)0101161100
GO:0009532plastid stroma11 (5.29%)1112130101
GO:0031976plastid thylakoid11 (5.29%)0111160100
GO:1902494catalytic complex10 (4.81%)0003060001
GO:0009535chloroplast thylakoid membrane10 (4.81%)0101160100
GO:0055035plastid thylakoid membrane10 (4.81%)0101160100
GO:0042651thylakoid membrane10 (4.81%)0101160100
GO:0070013intracellular organelle lumen8 (3.85%)0000042011
GO:0031974membrane-enclosed lumen8 (3.85%)0000042011
GO:0043233organelle lumen8 (3.85%)0000042011
GO:0031981nuclear lumen7 (3.37%)0000032011
GO:0044428nuclear part7 (3.37%)0000032011
GO:0030054cell junction6 (2.88%)0021011001
GO:0005911cell-cell junction6 (2.88%)0021011001
GO:0016021integral to membrane6 (2.88%)0001031100
GO:0031224intrinsic to membrane6 (2.88%)0001031100
GO:0009521photosystem6 (2.88%)0000041100
GO:0009506plasmodesma6 (2.88%)0021011001
GO:0010287plastoglobule6 (2.88%)1111100100
GO:0055044symplast6 (2.88%)0021011001
GO:0048046apoplast5 (2.40%)1010021000
GO:0005783endoplasmic reticulum5 (2.40%)1100110001
GO:0005576extracellular region5 (2.40%)1010021000
GO:0000785chromatin4 (1.92%)0001030000
GO:0044427chromosomal part4 (1.92%)0001030000
GO:0005694chromosome4 (1.92%)0001030000
GO:0044430cytoskeletal part4 (1.92%)0001101010
GO:0005856cytoskeleton4 (1.92%)0001101010
GO:0031090organelle membrane4 (1.92%)0100110001
GO:0009523photosystem II4 (1.92%)0000030100
GO:0005773vacuole4 (1.92%)0100210000
GO:0033202DNA helicase complex3 (1.44%)0000030000
GO:0005794Golgi apparatus3 (1.44%)0010010001
GO:0097346INO80-type complex3 (1.44%)0000030000
GO:0031011Ino80 complex3 (1.44%)0000030000
GO:0070603SWI/SNF superfamily-type complex3 (1.44%)0000030000
GO:0019898extrinsic to membrane3 (1.44%)0000020001
GO:0000790nuclear chromatin3 (1.44%)0000030000
GO:0000228nuclear chromosome3 (1.44%)0000030000
GO:0044454nuclear chromosome part3 (1.44%)0000030000
GO:0005730nucleolus3 (1.44%)0000002001
GO:1990204oxidoreductase complex3 (1.44%)0000030000
GO:0009522photosystem I3 (1.44%)0000011100
GO:0009654photosystem II oxygen evolving complex3 (1.44%)0000030000
GO:0031977thylakoid lumen3 (1.44%)0010020000
GO:0000151ubiquitin ligase complex3 (1.44%)0002000001
GO:0005774vacuolar membrane3 (1.44%)0100110000
GO:0044437vacuolar part3 (1.44%)0100110000
GO:0015629actin cytoskeleton2 (0.96%)0001000010
GO:0005618cell wall2 (0.96%)0010010000
GO:0009543chloroplast thylakoid lumen2 (0.96%)0000020000
GO:0030312external encapsulating structure2 (0.96%)0010010000
GO:0005874microtubule2 (0.96%)0000101000
GO:0015630microtubule cytoskeleton2 (0.96%)0000101000
GO:0016459myosin complex2 (0.96%)0001000010
GO:0009505plant-type cell wall2 (0.96%)0010010000
GO:0031978plastid thylakoid lumen2 (0.96%)0000020000
GO:0030126COPI vesicle coat1 (0.48%)0000000001
GO:0030137COPI-coated vesicle1 (0.48%)0000000001
GO:0030663COPI-coated vesicle membrane1 (0.48%)0000000001
GO:0080008Cul4-RING ubiquitin ligase complex1 (0.48%)0000000001
GO:1990104DNA bending complex1 (0.48%)0001000000
GO:0044815DNA packaging complex1 (0.48%)0001000000
GO:0044431Golgi apparatus part1 (0.48%)0000000001
GO:0000139Golgi membrane1 (0.48%)0000000001
GO:0005798Golgi-associated vesicle1 (0.48%)0000000001
GO:0030660Golgi-associated vesicle membrane1 (0.48%)0000000001
GO:0009317acetyl-CoA carboxylase complex1 (0.48%)0001000000
GO:0048475coated membrane1 (0.48%)0000000001
GO:0030135coated vesicle1 (0.48%)0000000001
GO:0030662coated vesicle membrane1 (0.48%)0000000001
GO:0031461cullin-RING ubiquitin ligase complex1 (0.48%)0000000001
GO:0016023cytoplasmic membrane-bounded vesicle1 (0.48%)0000000001
GO:0009898cytoplasmic side of plasma membrane1 (0.48%)0000000001
GO:0031410cytoplasmic vesicle1 (0.48%)0000000001
GO:0030659cytoplasmic vesicle membrane1 (0.48%)0000000001
GO:0044433cytoplasmic vesicle part1 (0.48%)0000000001
GO:0044445cytosolic part1 (0.48%)0010000000
GO:0022626cytosolic ribosome1 (0.48%)0010000000
GO:0012505endomembrane system1 (0.48%)0000000001
GO:0005788endoplasmic reticulum lumen1 (0.48%)0000010000
GO:0044432endoplasmic reticulum part1 (0.48%)0000010000
GO:0031234extrinsic to cytoplasmic side of plasma membrane1 (0.48%)0000000001
GO:0019897extrinsic to plasma membrane1 (0.48%)0000000001
GO:0005834heterotrimeric G-protein complex1 (0.48%)0000000001
GO:0000323lytic vacuole1 (0.48%)0000010000
GO:0000327lytic vacuole within protein storage vacuole1 (0.48%)0000010000
GO:0016592mediator complex1 (0.48%)0000000010
GO:0030117membrane coat1 (0.48%)0000000001
GO:0031988membrane-bounded vesicle1 (0.48%)0000000001
GO:0042579microbody1 (0.48%)0001000000
GO:0005739mitochondrion1 (0.48%)0000000001
GO:0005654nucleoplasm1 (0.48%)0000000010
GO:0044451nucleoplasm part1 (0.48%)0000000010
GO:0000786nucleosome1 (0.48%)0001000000
GO:0005777peroxisome1 (0.48%)0001000000
GO:0009782photosystem I antenna complex1 (0.48%)0000010000
GO:0000325plant-type vacuole1 (0.48%)0000010000
GO:0044459plasma membrane part1 (0.48%)0000000001
GO:0022624proteasome accessory complex1 (0.48%)0000010000
GO:0000502proteasome complex1 (0.48%)0000010000
GO:0005838proteasome regulatory particle1 (0.48%)0000010000
GO:0008540proteasome regulatory particle, base subcomplex1 (0.48%)0000010000
GO:0000326protein storage vacuole1 (0.48%)0000010000
GO:0032993protein-DNA complex1 (0.48%)0001000000
GO:0030529ribonucleoprotein complex1 (0.48%)0010000000
GO:0005840ribosome1 (0.48%)0010000000
GO:0000322storage vacuole1 (0.48%)0000010000
GO:0031982vesicle1 (0.48%)0000000001
GO:0030120vesicle coat1 (0.48%)0000000001
GO:0012506vesicle membrane1 (0.48%)0000000001

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding110 (52.88%)57414725193620
GO:1901363heterocyclic compound binding62 (29.81%)2238511121414
GO:0097159organic cyclic compound binding62 (29.81%)2238511121414
GO:0003824catalytic activity54 (25.96%)214113116268
GO:0003676nucleic acid binding46 (22.12%)1134410110210
GO:0005515protein binding46 (22.12%)23172108139
GO:0043167ion binding45 (21.63%)25174105137
GO:0003677DNA binding34 (16.35%)11312810008
GO:0043169cation binding27 (12.98%)1503284103
GO:0046872metal ion binding27 (12.98%)1503284103
GO:0016787hydrolase activity26 (12.50%)0034174142
GO:0001071nucleic acid binding transcription factor activity22 (10.58%)3120247003
GO:0003700sequence-specific DNA binding transcription factor activity22 (10.58%)3120247003
GO:1901265nucleoside phosphate binding19 (9.13%)1015121044
GO:0000166nucleotide binding19 (9.13%)1015121044
GO:0036094small molecule binding19 (9.13%)1015121044
GO:0046914transition metal ion binding19 (9.13%)1501064002
GO:0043168anion binding18 (8.65%)1014221034
GO:0016740transferase activity18 (8.65%)1004251113
GO:0008270zinc ion binding18 (8.65%)1401064002
GO:0097367carbohydrate derivative binding16 (7.69%)1014121024
GO:0032553ribonucleotide binding16 (7.69%)1014121024
GO:0001882nucleoside binding15 (7.21%)1014121023
GO:0001883purine nucleoside binding15 (7.21%)1014121023
GO:0017076purine nucleotide binding15 (7.21%)1014121023
GO:0032550purine ribonucleoside binding15 (7.21%)1014121023
GO:0035639purine ribonucleoside triphosphate binding15 (7.21%)1014121023
GO:0032555purine ribonucleotide binding15 (7.21%)1014121023
GO:0032549ribonucleoside binding15 (7.21%)1014121023
GO:0043565sequence-specific DNA binding14 (6.73%)0020046002
GO:0048037cofactor binding13 (6.25%)0000152122
GO:0046983protein dimerization activity13 (6.25%)2201024002
GO:0005524ATP binding12 (5.77%)1014110022
GO:0030554adenyl nucleotide binding12 (5.77%)1014110022
GO:0032559adenyl ribonucleotide binding12 (5.77%)1014110022
GO:0016788hydrolase activity, acting on ester bonds11 (5.29%)0001042112
GO:0016491oxidoreductase activity9 (4.33%)0100021122
GO:0016746transferase activity, transferring acyl groups9 (4.33%)0000141111
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups9 (4.33%)0000141111
GO:0044620ACP phosphopantetheine attachment site binding8 (3.85%)0000041111
GO:0000036ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process8 (3.85%)0000041111
GO:0016297acyl-[acyl-carrier-protein] hydrolase activity8 (3.85%)0000041111
GO:0004312fatty acid synthase activity8 (3.85%)0000041111
GO:0051192prosthetic group binding8 (3.85%)0000041111
GO:0016790thiolester hydrolase activity8 (3.85%)0000041111
GO:0016798hydrolase activity, acting on glycosyl bonds7 (3.37%)0011112010
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds7 (3.37%)0011112010
GO:0003723RNA binding6 (2.88%)0000023001
GO:0016817hydrolase activity, acting on acid anhydrides6 (2.88%)0012010020
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides6 (2.88%)0012010020
GO:0016874ligase activity6 (2.88%)0003020001
GO:0017111nucleoside-triphosphatase activity6 (2.88%)0012010020
GO:0016462pyrophosphatase activity6 (2.88%)0012010020
GO:0016881acid-amino acid ligase activity5 (2.40%)0002020001
GO:0016301kinase activity5 (2.40%)1002100001
GO:0016879ligase activity, forming carbon-nitrogen bonds5 (2.40%)0002020001
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen5 (2.40%)0100000121
GO:0016773phosphotransferase activity, alcohol group as acceptor5 (2.40%)1002100001
GO:0004672protein kinase activity5 (2.40%)1002100001
GO:0019787small conjugating protein ligase activity5 (2.40%)0002020001
GO:0016772transferase activity, transferring phosphorus-containing groups5 (2.40%)1002100001
GO:0004842ubiquitin-protein ligase activity5 (2.40%)0002020001
GO:0003682chromatin binding4 (1.92%)0000011002
GO:0050662coenzyme binding4 (1.92%)0000011011
GO:0016829lyase activity4 (1.92%)1010100001
GO:0004497monooxygenase activity4 (1.92%)0100000120
GO:0004674protein serine/threonine kinase activity4 (1.92%)1002100000
GO:0016887ATPase activity3 (1.44%)0001010010
GO:0005525GTP binding3 (1.44%)0000011001
GO:0008324cation transmembrane transporter activity3 (1.44%)0000011001
GO:0004348glucosylceramidase activity3 (1.44%)0001011000
GO:0019001guanyl nucleotide binding3 (1.44%)0000011001
GO:0032561guanyl ribonucleotide binding3 (1.44%)0000011001
GO:0004386helicase activity3 (1.44%)0010010010
GO:0042802identical protein binding3 (1.44%)0001020000
GO:0022890inorganic cation transmembrane transporter activity3 (1.44%)0000011001
GO:0015075ion transmembrane transporter activity3 (1.44%)0000011001
GO:0046873metal ion transmembrane transporter activity3 (1.44%)0000011001
GO:0016709oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3 (1.44%)0000000120
GO:0022891substrate-specific transmembrane transporter activity3 (1.44%)0000011001
GO:0022892substrate-specific transporter activity3 (1.44%)0000011001
GO:0022857transmembrane transporter activity3 (1.44%)0000011001
GO:0005215transporter activity3 (1.44%)0000011001
GO:00800845S rDNA binding2 (0.96%)0000002000
GO:00080975S rRNA binding2 (0.96%)0000002000
GO:0008026ATP-dependent helicase activity2 (0.96%)0000010010
GO:0042623ATPase activity, coupled2 (0.96%)0000010010
GO:0016832aldehyde-lyase activity2 (0.96%)1010000000
GO:0005509calcium ion binding2 (0.96%)0000020000
GO:0016830carbon-carbon lyase activity2 (0.96%)1010000000
GO:0051213dioxygenase activity2 (0.96%)0000010001
GO:0004332fructose-bisphosphate aldolase activity2 (0.96%)1010000000
GO:0016853isomerase activity2 (0.96%)0000011000
GO:0015077monovalent inorganic cation transmembrane transporter activity2 (0.96%)0000001001
GO:0003774motor activity2 (0.96%)0001000010
GO:0016791phosphatase activity2 (0.96%)0001000001
GO:0004721phosphoprotein phosphatase activity2 (0.96%)0001000001
GO:0042578phosphoric ester hydrolase activity2 (0.96%)0001000001
GO:0008266poly(U) RNA binding2 (0.96%)0000020000
GO:0008187poly-pyrimidine tract binding2 (0.96%)0000020000
GO:0004650polygalacturonase activity2 (0.96%)0010100000
GO:0015079potassium ion transmembrane transporter activity2 (0.96%)0000001001
GO:0004722protein serine/threonine phosphatase activity2 (0.96%)0001000001
GO:0070035purine NTP-dependent helicase activity2 (0.96%)0000010010
GO:0000182rDNA binding2 (0.96%)0000002000
GO:0019843rRNA binding2 (0.96%)0000002000
GO:0003727single-stranded RNA binding2 (0.96%)0000020000
GO:0046906tetrapyrrole binding2 (0.96%)0100000100
GO:0016757transferase activity, transferring glycosyl groups2 (0.96%)0002000000
GO:0016758transferase activity, transferring hexosyl groups2 (0.96%)0002000000
GO:0009540zeaxanthin epoxidase [overall] activity2 (0.96%)0000000110
GO:0052662zeaxanthin epoxidase activity2 (0.96%)0000000110
GO:00431383'-5' DNA helicase activity1 (0.48%)0000000010
GO:00455499-cis-epoxycarotenoid dioxygenase activity1 (0.48%)0000010000
GO:0009824AMP dimethylallyltransferase activity1 (0.48%)0000000001
GO:0016408C-acyltransferase activity1 (0.48%)0000100000
GO:0016454C-palmitoyltransferase activity1 (0.48%)0000100000
GO:0016421CoA carboxylase activity1 (0.48%)0001000000
GO:0003678DNA helicase activity1 (0.48%)0000000010
GO:0010181FMN binding1 (0.48%)0000000001
GO:0030742GTP-dependent protein binding1 (0.48%)0001000000
GO:0051020GTPase binding1 (0.48%)0001000000
GO:0004499N,N-dimethylaniline monooxygenase activity1 (0.48%)0000000010
GO:0050661NADP binding1 (0.48%)0000000010
GO:0017137Rab GTPase binding1 (0.48%)0001000000
GO:0017016Ras GTPase binding1 (0.48%)0001000000
GO:0005484SNAP receptor activity1 (0.48%)0000000001
GO:0010489UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity1 (0.48%)0000001000
GO:0010490UDP-4-keto-rhamnose-4-keto-reductase activity1 (0.48%)0000001000
GO:0046507UDPsulfoquinovose synthase activity1 (0.48%)0000010000
GO:0003989acetyl-CoA carboxylase activity1 (0.48%)0001000000
GO:0003779actin binding1 (0.48%)0000001000
GO:0051015actin filament binding1 (0.48%)0000001000
GO:0052663antheraxanthin epoxidase activity1 (0.48%)0000000100
GO:0004190aspartic-type endopeptidase activity1 (0.48%)0010000000
GO:0070001aspartic-type peptidase activity1 (0.48%)0010000000
GO:0004567beta-mannosidase activity1 (0.48%)0000000010
GO:0060090binding, bridging1 (0.48%)0000001000
GO:0016835carbon-oxygen lyase activity1 (0.48%)0000000001
GO:0016838carbon-oxygen lyase activity, acting on phosphates1 (0.48%)0000000001
GO:0010436carotenoid dioxygenase activity1 (0.48%)0000010000
GO:0016168chlorophyll binding1 (0.48%)0000000100
GO:0004107chorismate synthase activity1 (0.48%)0000000001
GO:0008092cytoskeletal protein binding1 (0.48%)0000001000
GO:0008830dTDP-4-dehydrorhamnose 3,5-epimerase activity1 (0.48%)0000001000
GO:0008831dTDP-4-dehydrorhamnose reductase activity1 (0.48%)0000001000
GO:0015036disulfide oxidoreductase activity1 (0.48%)0000010000
GO:0072509divalent inorganic cation transmembrane transporter activity1 (0.48%)0000010000
GO:0004175endopeptidase activity1 (0.48%)0010000000
GO:0019899enzyme binding1 (0.48%)0001000000
GO:0015093ferrous iron transmembrane transporter activity1 (0.48%)0000010000
GO:0046424ferulate 5-hydroxylase activity1 (0.48%)0100000000
GO:0050660flavin adenine dinucleotide binding1 (0.48%)0000000010
GO:0009378four-way junction helicase activity1 (0.48%)0000000010
GO:0020037heme binding1 (0.48%)0100000000
GO:0046508hydrolase activity, acting on carbon-sulfur bonds1 (0.48%)0000010000
GO:0005506iron ion binding1 (0.48%)0100000000
GO:0005381iron ion transmembrane transporter activity1 (0.48%)0000010000
GO:0016885ligase activity, forming carbon-carbon bonds1 (0.48%)0001000000
GO:0016298lipase activity1 (0.48%)0000001000
GO:0008289lipid binding1 (0.48%)0000010000
GO:0016985mannan endo-1,4-beta-mannosidase activity1 (0.48%)0000000010
GO:0015923mannosidase activity1 (0.48%)0000000010
GO:0060089molecular transducer activity1 (0.48%)0000010000
GO:0016614oxidoreductase activity, acting on CH-OH group of donors1 (0.48%)0000001000
GO:0016651oxidoreductase activity, acting on NAD(P)H1 (0.48%)0100000000
GO:0016667oxidoreductase activity, acting on a sulfur group of donors1 (0.48%)0000010000
GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1 (0.48%)0000000001
GO:0016701oxidoreductase activity, acting on single donors with incorporation of molecular oxygen1 (0.48%)0000010000
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1 (0.48%)0000010000
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor1 (0.48%)0000001000
GO:0016409palmitoyltransferase activity1 (0.48%)0000100000
GO:0008233peptidase activity1 (0.48%)0010000000
GO:0070011peptidase activity, acting on L-amino acid peptides1 (0.48%)0010000000
GO:0001653peptide receptor activity1 (0.48%)0000010000
GO:0031593polyubiquitin binding1 (0.48%)0000010000
GO:0008022protein C-terminus binding1 (0.48%)0010000000
GO:0030674protein binding, bridging1 (0.48%)0000001000
GO:0032403protein complex binding1 (0.48%)0000001000
GO:0015035protein disulfide oxidoreductase activity1 (0.48%)0000010000
GO:0042803protein homodimerization activity1 (0.48%)0001000000
GO:0030170pyridoxal phosphate binding1 (0.48%)0000100000
GO:0016854racemase and epimerase activity1 (0.48%)0000001000
GO:0016857racemase and epimerase activity, acting on carbohydrates and derivatives1 (0.48%)0000001000
GO:0004872receptor activity1 (0.48%)0000010000
GO:0000975regulatory region DNA binding1 (0.48%)0000001000
GO:0001067regulatory region nucleic acid binding1 (0.48%)0000001000
GO:0008430selenium binding1 (0.48%)0001000000
GO:0004758serine C-palmitoyltransferase activity1 (0.48%)0000100000
GO:0004871signal transducer activity1 (0.48%)0000010000
GO:0038023signaling receptor activity1 (0.48%)0000010000
GO:0031267small GTPase binding1 (0.48%)0001000000
GO:0032182small conjugating protein binding1 (0.48%)0000010000
GO:0005198structural molecule activity1 (0.48%)0000000001
GO:0008146sulfotransferase activity1 (0.48%)0000010000
GO:0008134transcription factor binding1 (0.48%)0000000001
GO:0044212transcription regulatory region DNA binding1 (0.48%)0000001000
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups1 (0.48%)0000000001
GO:0016769transferase activity, transferring nitrogenous groups1 (0.48%)0000100000
GO:0016782transferase activity, transferring sulfur-containing groups1 (0.48%)0000010000
GO:0046915transition metal ion transmembrane transporter activity1 (0.48%)0000010000
GO:0043130ubiquitin binding1 (0.48%)0000010000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process104 (50.00%)574131023163419
GO:0008152metabolic process98 (47.12%)57514721153516
GO:0044237cellular metabolic process88 (42.31%)57312621143314
GO:0071704organic substance metabolic process83 (39.90%)56510617143413
GO:0044238primary metabolic process82 (39.42%)55510617143413
GO:0044699single-organism process67 (32.21%)223951682614
GO:0009058biosynthetic process61 (29.33%)4623415122211
GO:0044249cellular biosynthetic process61 (29.33%)4623415122211
GO:1901576organic substance biosynthetic process60 (28.85%)4623415122210
GO:0043170macromolecule metabolic process58 (27.88%)5538410101111
GO:0044260cellular macromolecule metabolic process57 (27.40%)5528410101111
GO:0044763single-organism cellular process56 (26.92%)21375158249
GO:0006807nitrogen compound metabolic process51 (24.52%)453449110110
GO:0050896response to stimulus51 (24.52%)33495115227
GO:0065007biological regulation49 (23.56%)45334981111
GO:0006725cellular aromatic compound metabolic process48 (23.08%)463338100110
GO:1901360organic cyclic compound metabolic process48 (23.08%)463338100110
GO:0050789regulation of biological process48 (23.08%)45334981110
GO:0050794regulation of cellular process48 (23.08%)45334981110
GO:0034641cellular nitrogen compound metabolic process47 (22.60%)45334810019
GO:0046483heterocycle metabolic process46 (22.12%)45333810019
GO:0006139nucleobase-containing compound metabolic process46 (22.12%)45333810019
GO:0019438aromatic compound biosynthetic process44 (21.15%)46223810009
GO:0090304nucleic acid metabolic process44 (21.15%)4523389019
GO:1901362organic cyclic compound biosynthetic process44 (21.15%)46223810009
GO:0034645cellular macromolecule biosynthetic process43 (20.67%)45223910008
GO:0044271cellular nitrogen compound biosynthetic process43 (20.67%)45224810008
GO:0009059macromolecule biosynthetic process43 (20.67%)45223910008
GO:0016070RNA metabolic process42 (20.19%)4522389009
GO:0010467gene expression42 (20.19%)4522389009
GO:0018130heterocycle biosynthetic process42 (20.19%)45223810008
GO:0034654nucleobase-containing compound biosynthetic process42 (20.19%)45223810008
GO:0032774RNA biosynthetic process41 (19.71%)4522389008
GO:0006351transcription, DNA-templated41 (19.71%)4522389008
GO:0031323regulation of cellular metabolic process40 (19.23%)4522388008
GO:0060255regulation of macromolecule metabolic process40 (19.23%)4522388008
GO:0019222regulation of metabolic process40 (19.23%)4522388008
GO:0080090regulation of primary metabolic process40 (19.23%)4522388008
GO:0009889regulation of biosynthetic process39 (18.75%)4522388007
GO:0031326regulation of cellular biosynthetic process39 (18.75%)4522388007
GO:2000112regulation of cellular macromolecule biosynthetic process39 (18.75%)4522388007
GO:0010556regulation of macromolecule biosynthetic process39 (18.75%)4522388007
GO:2001141regulation of RNA biosynthetic process38 (18.27%)4522378007
GO:0051252regulation of RNA metabolic process38 (18.27%)4522378007
GO:0010468regulation of gene expression38 (18.27%)4522378007
GO:0051171regulation of nitrogen compound metabolic process38 (18.27%)4522378007
GO:0019219regulation of nucleobase-containing compound metabolic process38 (18.27%)4522378007
GO:0006355regulation of transcription, DNA-dependent38 (18.27%)4522378007
GO:0009628response to abiotic stimulus33 (15.87%)1337454213
GO:0042221response to chemical33 (15.87%)3037373115
GO:0006950response to stress33 (15.87%)1136293125
GO:0044710single-organism metabolic process32 (15.38%)11131105244
GO:1901700response to oxygen-containing compound29 (13.94%)2037361115
GO:0032502developmental process26 (12.50%)1124262017
GO:0044767single-organism developmental process26 (12.50%)1124262017
GO:0010033response to organic substance24 (11.54%)3024252114
GO:0032501multicellular organismal process23 (11.06%)1114151126
GO:0044707single-multicellular organism process22 (10.58%)1114151125
GO:0044711single-organism biosynthetic process21 (10.10%)1101174222
GO:0044281small molecule metabolic process21 (10.10%)1011174222
GO:0044255cellular lipid metabolic process20 (9.62%)1002174221
GO:0006629lipid metabolic process20 (9.62%)1002174221
GO:0007275multicellular organismal development20 (9.62%)1114151015
GO:0009719response to endogenous stimulus20 (9.62%)3024221114
GO:0048856anatomical structure development19 (9.13%)1114141006
GO:0051716cellular response to stimulus18 (8.65%)1013161122
GO:0006082organic acid metabolic process18 (8.65%)1001163222
GO:0043436oxoacid metabolic process18 (8.65%)1001163222
GO:0009725response to hormone18 (8.65%)3023221113
GO:0010035response to inorganic substance18 (8.65%)2025231111
GO:0019752carboxylic acid metabolic process17 (8.17%)1001153222
GO:0008610lipid biosynthetic process17 (8.17%)1001163221
GO:0009416response to light stimulus17 (8.17%)0223311212
GO:0009314response to radiation17 (8.17%)0223311212
GO:0044283small molecule biosynthetic process17 (8.17%)1001153222
GO:0046394carboxylic acid biosynthetic process16 (7.69%)1001053222
GO:0072330monocarboxylic acid biosynthetic process16 (7.69%)1001053222
GO:0032787monocarboxylic acid metabolic process16 (7.69%)1001053222
GO:0016053organic acid biosynthetic process16 (7.69%)1001053222
GO:0033993response to lipid16 (7.69%)2023220113
GO:0097305response to alcohol15 (7.21%)2022220113
GO:0009791post-embryonic development14 (6.73%)0012151013
GO:0019538protein metabolic process14 (6.73%)2015120102
GO:0009266response to temperature stimulus14 (6.73%)0123211112
GO:0048731system development14 (6.73%)111204</