PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_344
Name: MSACRCYM
Description: MSA (M-specific activator) motif in Catharanthus roseus B-type cyclin (CYM) promoter; Essential for M phase-specific expression; Found at -66 to -58

#Associated genes: 96
#Associated InterPro terms: 102

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InterPro	Description	#Associated genes	ath	bra	cme	egr	gma	ptr	ppe	sly	stu	vvi
IPR004367	Cyclin, C-terminal domain	8 (8.33%)	1	1	1	1	0	0	0	1	1	2
IPR006671	Cyclin, N-terminal	8 (8.33%)	1	1	1	1	0	0	0	1	1	2
IPR013763	Cyclin-like	8 (8.33%)	1	1	1	1	0	0	0	1	1	2
IPR005512	PRONE domain	7 (7.29%)	2	1	0	1	1	2	0	0	0	0
IPR000727	Target SNARE coiled-coil domain	5 (5.21%)	0	0	1	0	1	1	1	0	0	1
IPR001841	Zinc finger, RING-type	4 (4.17%)	0	0	0	1	1	1	1	0	0	0
IPR013083	Zinc finger, RING/FYVE/PHD-type	4 (4.17%)	0	0	0	1	1	1	1	0	0	0
IPR024867	Nuclear factor related to kappa-B-binding protein	3 (3.13%)	0	0	0	0	2	1	0	0	0	0
IPR025322	Protein of unknown function DUF4228, plant	3 (3.13%)	0	0	0	1	0	1	0	0	1	0
IPR002035	von Willebrand factor, type A	3 (3.13%)	0	0	0	1	0	1	1	0	0	0
IPR000131	ATPase, F1 complex, gamma subunit	2 (2.08%)	0	0	0	0	0	0	0	1	1	0
IPR023632	ATPase, F1 complex, gamma subunit conserved site	2 (2.08%)	0	0	0	0	0	0	0	1	1	0
IPR023633	ATPase, F1 complex, gamma subunit domain	2 (2.08%)	0	0	0	0	0	0	0	1	1	0
IPR000095	CRIB domain	2 (2.08%)	0	0	0	0	1	0	1	0	0	0
IPR025993	Ceramide glucosyltransferase	2 (2.08%)	0	1	0	0	1	0	0	0	0	0
IPR001844	Chaperonin Cpn60	2 (2.08%)	0	0	0	0	0	2	0	0	0	0
IPR018370	Chaperonin Cpn60, conserved site	2 (2.08%)	0	0	0	0	0	2	0	0	0	0
IPR002423	Chaperonin Cpn60/TCP-1	2 (2.08%)	0	0	0	0	0	2	0	0	0	0
IPR026823	Complement Clr-like EGF domain	2 (2.08%)	0	0	0	0	0	1	1	0	0	0
IPR001881	EGF-like calcium-binding domain	2 (2.08%)	0	0	0	0	0	1	1	0	0	0
IPR018097	EGF-like calcium-binding, conserved site	2 (2.08%)	0	0	0	0	0	1	1	0	0	0
IPR027409	GroEL-like apical domain	2 (2.08%)	0	0	0	0	0	2	0	0	0	0
IPR027413	GroEL-like equatorial domain	2 (2.08%)	0	0	0	0	0	2	0	0	0	0
IPR001951	Histone H4	2 (2.08%)	0	0	0	0	2	0	0	0	0	0
IPR019809	Histone H4, conserved site	2 (2.08%)	0	0	0	0	2	0	0	0	0	0
IPR007125	Histone core	2 (2.08%)	0	0	0	0	2	0	0	0	0	0
IPR009072	Histone-fold	2 (2.08%)	0	0	0	0	2	0	0	0	0	0
IPR001752	Kinesin, motor domain	2 (2.08%)	0	0	0	0	1	1	0	0	0	0
IPR019821	Kinesin, motor region, conserved site	2 (2.08%)	0	0	0	0	1	1	0	0	0	0
IPR027640	Kinesin-like protein	2 (2.08%)	0	0	0	0	1	1	0	0	0	0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	2 (2.08%)	0	0	0	0	1	1	0	0	0	0
IPR000834	Peptidase M14, carboxypeptidase A	2 (2.08%)	0	0	1	0	0	0	1	0	0	0
IPR003137	Protease-associated domain, PA	2 (2.08%)	0	0	0	0	0	1	1	0	0	0
IPR008936	Rho GTPase activation protein	2 (2.08%)	0	0	0	0	1	0	1	0	0	0
IPR000198	Rho GTPase-activating protein domain	2 (2.08%)	0	0	0	0	1	0	1	0	0	0
IPR001680	WD40 repeat	2 (2.08%)	0	1	0	1	0	0	0	0	0	0
IPR017986	WD40-repeat-containing domain	2 (2.08%)	0	1	0	1	0	0	0	0	0	0
IPR015943	WD40/YVTN repeat-like-containing domain	2 (2.08%)	0	1	0	1	0	0	0	0	0	0
IPR023410	14-3-3 domain	1 (1.04%)	0	0	0	0	0	0	0	0	1	0
IPR000308	14-3-3 protein	1 (1.04%)	0	0	0	0	0	0	0	0	1	0
IPR023409	14-3-3 protein, conserved site	1 (1.04%)	0	0	0	0	0	0	0	0	1	0
IPR003311	AUX/IAA protein	1 (1.04%)	0	0	0	0	1	0	0	0	0	0
IPR011525	Aux/IAA-ARF-dimerisation	1 (1.04%)	0	0	0	0	1	0	0	0	0	0
IPR010525	Auxin response factor	1 (1.04%)	0	0	0	0	1	0	0	0	0	0
IPR003340	B3 DNA binding domain	1 (1.04%)	0	0	0	0	1	0	0	0	0	0
IPR011333	BTB/POZ fold	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR004827	Basic-leucine zipper domain	1 (1.04%)	0	0	0	0	1	0	0	0	0	0
IPR005172	CRC domain	1 (1.04%)	0	0	0	0	0	0	1	0	0	0
IPR001715	Calponin homology domain	1 (1.04%)	0	0	0	0	0	0	0	0	0	1
IPR001757	Cation-transporting P-type ATPase	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR004014	Cation-transporting P-type ATPase, N-terminal	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR027934	Cellulose synthase, RING-type zinc finger	1 (1.04%)	0	0	0	0	1	0	0	0	0	0
IPR002130	Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain	1 (1.04%)	0	1	0	0	0	0	0	0	0	0
IPR015300	DNA-binding pseudobarrel domain	1 (1.04%)	0	0	0	0	1	0	0	0	0	0
IPR005061	Domain of unknown function DUF292, eukaryotic	1 (1.04%)	0	0	0	0	0	0	0	0	0	1
IPR004182	GRAM domain	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR002109	Glutaredoxin	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR006534	H+ transporting P-type ATPase, subfamily IIIA	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR023214	HAD-like domain	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR006121	Heavy metal-associated domain, HMA	1 (1.04%)	1	0	0	0	0	0	0	0	0	0
IPR009071	High mobility group box domain	1 (1.04%)	1	0	0	0	0	0	0	0	0	0
IPR013194	Histone deacetylase interacting	1 (1.04%)	0	0	1	0	0	0	0	0	0	0
IPR009057	Homeodomain-like	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR000048	IQ motif, EF-hand binding site	1 (1.04%)	0	0	0	0	0	0	0	0	0	1
IPR001611	Leucine-rich repeat	1 (1.04%)	0	0	0	0	0	0	1	0	0	0
IPR003409	MORN motif	1 (1.04%)	1	0	0	0	0	0	0	0	0	0
IPR021720	Malectin	1 (1.04%)	0	0	0	0	1	0	0	0	0	0
IPR003527	Mitogen-activated protein (MAP) kinase, conserved site	1 (1.04%)	0	1	0	0	0	0	0	0	0	0
IPR006447	Myb domain, plants	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR023298	P-type ATPase, transmembrane domain	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR008250	P-type ATPase, A domain	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR023299	P-type ATPase, cytoplasmic domain N	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR018303	P-type ATPase, phosphorylation site	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR003822	Paired amphipathic helix	1 (1.04%)	0	0	1	0	0	0	0	0	0	0
IPR009438	Phytosulfokine	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR000719	Protein kinase domain	1 (1.04%)	0	1	0	0	0	0	0	0	0	0
IPR017441	Protein kinase, ATP binding site	1 (1.04%)	0	1	0	0	0	0	0	0	0	0
IPR011009	Protein kinase-like domain	1 (1.04%)	0	1	0	0	0	0	0	0	0	0
IPR009902	Protein of unknown function DUF1442	1 (1.04%)	0	0	0	0	1	0	0	0	0	0
IPR012438	Protein of unknown function DUF1639	1 (1.04%)	0	0	0	0	0	0	1	0	0	0
IPR007650	Protein of unknown function DUF581	1 (1.04%)	1	0	0	0	0	0	0	0	0	0
IPR000592	Ribosomal protein S27e	1 (1.04%)	0	0	0	0	0	0	0	0	0	1
IPR023407	Ribosomal protein S27e, zinc-binding domain	1 (1.04%)	0	0	0	0	0	0	0	0	0	1
IPR010994	RuvA domain 2-like	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR001005	SANT/Myb domain	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain	1 (1.04%)	0	1	0	0	0	0	0	0	0	0
IPR008271	Serine/threonine-protein kinase, active site	1 (1.04%)	0	1	0	0	0	0	0	0	0	0
IPR009675	TPX2	1 (1.04%)	0	0	0	0	0	0	1	0	0	0
IPR027330	TPX2 central domain	1 (1.04%)	0	0	0	0	0	0	1	0	0	0
IPR027329	TPX2, C-terminal domain	1 (1.04%)	0	0	0	0	0	0	1	0	0	0
IPR019734	Tetratricopeptide repeat	1 (1.04%)	0	1	0	0	0	0	0	0	0	0
IPR013026	Tetratricopeptide repeat-containing domain	1 (1.04%)	0	1	0	0	0	0	0	0	0	0
IPR011990	Tetratricopeptide-like helical	1 (1.04%)	0	1	0	0	0	0	0	0	0	0
IPR012336	Thioredoxin-like fold	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR005202	Transcription factor GRAS	1 (1.04%)	0	0	0	0	0	1	0	0	0	0
IPR025610	Transcription factor MYC/MYB N-terminal	1 (1.04%)	0	0	0	0	0	0	0	0	0	1
IPR019775	WD40 repeat, conserved site	1 (1.04%)	0	0	0	1	0	0	0	0	0	0
IPR025287	Wall-associated receptor kinase galacturonan-binding domain	1 (1.04%)	0	0	1	0	0	0	0	0	0	0
IPR012946	X8	1 (1.04%)	0	0	0	0	0	0	0	1	0	0
IPR007087	Zinc finger, C2H2	1 (1.04%)	0	0	0	0	1	0	0	0	0	0
IPR015880	Zinc finger, C2H2-like	1 (1.04%)	0	0	0	0	1	0	0	0	0	0
IPR011332	Zinc-binding ribosomal protein	1 (1.04%)	0	0	0	0	0	0	0	0	0	1