PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_83
Name: PRR5
Description: N/A

#Associated genes: 636
#Associated MapMan terms: 206

Show species without binding site experiments

Click table-header(s) to enable sorting

MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	112 (17.61%)	15	20	3	34	9	11	8	12
27.3	RNA.regulation of transcription	91 (14.31%)	12	16	2	26	9	8	7	11
29	protein	68 (10.69%)	4	16	6	21	5	4	5	7
29.4	protein.postranslational modification	41 (6.45%)	1	5	3	17	3	4	2	6
30	signalling	32 (5.03%)	2	6	4	5	2	2	2	9
20	stress	21 (3.30%)	3	3	3	3	4	2	0	3
31	cell	17 (2.67%)	2	1	1	5	2	2	1	3
26	misc	15 (2.36%)	2	5	2	2	1	3	0	0
20.2	stress.abiotic	14 (2.20%)	3	3	1	2	3	1	0	1
33	development	13 (2.04%)	1	3	0	4	1	1	2	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	12 (1.89%)	0	1	1	3	2	4	0	1
30.5	signalling.G-proteins	12 (1.89%)	0	3	1	3	1	1	1	2
34	transport	12 (1.89%)	3	0	2	1	1	2	2	1
29.5	protein.degradation	11 (1.73%)	1	6	1	1	1	0	0	1
31.1	cell.organisation	11 (1.73%)	1	1	0	4	2	1	0	2
33.99	development.unspecified	11 (1.73%)	1	3	0	4	0	1	1	1
27.3.67	RNA.regulation of transcription.putative transcription regulator	10 (1.57%)	1	3	0	0	1	1	2	2
27.3.99	RNA.regulation of transcription.unclassified	10 (1.57%)	3	0	1	4	1	1	0	0
29.3	protein.targeting	10 (1.57%)	1	4	1	3	0	0	1	0
29.4.1	protein.postranslational modification.kinase	10 (1.57%)	0	0	1	4	0	1	0	4
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	10 (1.57%)	0	0	1	4	0	1	0	4
20.2.1	stress.abiotic.heat	9 (1.42%)	2	3	1	1	1	1	0	0
27.4	RNA.RNA binding	9 (1.42%)	0	3	0	4	0	1	0	1
28	DNA	9 (1.42%)	1	0	0	4	1	1	1	1
28.1	DNA.synthesis/chromatin structure	9 (1.42%)	1	0	0	4	1	1	1	1
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	9 (1.42%)	2	2	0	4	0	0	0	1
30.3	signalling.calcium	9 (1.42%)	1	2	1	2	1	0	0	2
10	cell wall	8 (1.26%)	2	1	1	1	2	0	0	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	8 (1.26%)	1	0	0	5	0	1	0	1
29.5.11	protein.degradation.ubiquitin	8 (1.26%)	1	5	1	0	0	0	0	1
3	minor CHO metabolism	7 (1.10%)	1	3	0	1	1	0	0	1
20.1	stress.biotic	7 (1.10%)	0	0	2	1	1	1	0	2
26.13	misc.acid and other phosphatases	7 (1.10%)	1	5	0	1	0	0	0	0
27.2	RNA.transcription	7 (1.10%)	2	1	1	1	0	1	1	0
30.2	signalling.receptor kinases	7 (1.10%)	0	0	2	0	0	0	1	4
17	hormone metabolism	6 (0.94%)	0	1	0	1	1	0	0	3
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	6 (0.94%)	0	1	1	1	0	1	0	2
27.3.57	RNA.regulation of transcription.JUMONJI family	6 (0.94%)	1	1	0	1	0	1	2	0
11	lipid metabolism	5 (0.79%)	0	1	1	2	0	0	0	1
16	secondary metabolism	5 (0.79%)	2	0	1	0	0	0	2	0
27.1	RNA.processing	5 (0.79%)	1	0	0	3	0	1	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	5 (0.79%)	0	0	1	0	1	1	0	2
27.3.38	RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family	5 (0.79%)	0	1	0	0	2	1	0	1
1	PS	4 (0.63%)	0	0	1	0	1	0	2	0
9	mitochondrial electron transport / ATP synthesis	4 (0.63%)	0	1	0	3	0	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	4 (0.63%)	0	2	0	1	1	0	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	4 (0.63%)	0	0	0	2	1	1	0	0
29.3.1	protein.targeting.nucleus	4 (0.63%)	1	2	1	0	0	0	0	0
3.2	minor CHO metabolism.trehalose	4 (0.63%)	1	1	0	1	0	0	0	1
30.2.11	signalling.receptor kinases.leucine rich repeat XI	4 (0.63%)	0	0	2	0	0	0	1	1
10.1	cell wall.precursor synthesis	3 (0.47%)	2	1	0	0	0	0	0	0
10.6	cell wall.degradation	3 (0.47%)	0	0	1	0	1	0	0	1
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	3 (0.47%)	0	0	1	0	1	0	0	1
11.9	lipid metabolism.lipid degradation	3 (0.47%)	0	0	1	2	0	0	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	3 (0.47%)	0	0	1	2	0	0	0	0
16.8	secondary metabolism.flavonoids	3 (0.47%)	1	0	1	0	0	0	1	0
16.8.2	secondary metabolism.flavonoids.chalcones	3 (0.47%)	1	0	1	0	0	0	1	0
17.5	hormone metabolism.ethylene	3 (0.47%)	0	1	0	1	0	0	0	1
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	3 (0.47%)	0	0	0	2	0	0	0	1
27.3.73	RNA.regulation of transcription.Zn-finger(CCHC)	3 (0.47%)	0	0	0	1	1	1	0	0
29.2	protein.synthesis	3 (0.47%)	0	0	1	0	0	0	2	0
29.3.4	protein.targeting.secretory pathway	3 (0.47%)	0	1	0	1	0	0	1	0
3.2.3	minor CHO metabolism.trehalose.potential TPS/TPP	3 (0.47%)	1	1	0	1	0	0	0	0
1.1	PS.lightreaction	2 (0.31%)	0	0	0	0	1	0	1	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	2 (0.31%)	0	0	0	0	1	0	1	0
1.2	PS.photorespiration	2 (0.31%)	0	0	1	0	0	0	1	0
1.2.5	PS.photorespiration.serine hydroxymethyltransferase	2 (0.31%)	0	0	1	0	0	0	1	0
3.5	minor CHO metabolism.others	2 (0.31%)	0	2	0	0	0	0	0	0
11.1	lipid metabolism.FA synthesis and FA elongation	2 (0.31%)	0	1	0	0	0	0	0	1
11.9.3.1	lipid metabolism.lipid degradation.lysophospholipases.phospholipase D	2 (0.31%)	0	0	0	2	0	0	0	0
12	N-metabolism	2 (0.31%)	0	0	0	1	1	0	0	0
12.2	N-metabolism.ammonia metabolism	2 (0.31%)	0	0	0	1	1	0	0	0
12.2.1	N-metabolism.ammonia metabolism.glutamate synthase	2 (0.31%)	0	0	0	1	1	0	0	0
13	amino acid metabolism	2 (0.31%)	0	0	0	0	1	0	1	0
17.2	hormone metabolism.auxin	2 (0.31%)	0	0	0	0	1	0	0	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	2 (0.31%)	0	0	0	0	1	0	0	1
17.5.2	hormone metabolism.ethylene.signal transduction	2 (0.31%)	0	1	0	0	0	0	0	1
20.1.7	stress.biotic.PR-proteins	2 (0.31%)	0	0	1	0	0	0	0	1
20.2.3	stress.abiotic.drought/salt	2 (0.31%)	1	0	0	0	0	0	0	1
26.2	misc.UDP glucosyl and glucoronyl transferases	2 (0.31%)	0	0	0	0	1	1	0	0
26.3	misc.gluco-, galacto- and mannosidases	2 (0.31%)	0	0	2	0	0	0	0	0
26.3.1	misc.gluco-, galacto- and mannosidases.alpha-galactosidase	2 (0.31%)	0	0	2	0	0	0	0	0
27.3.16	RNA.regulation of transcription.CCAAT box binding factor family, HAP5	2 (0.31%)	0	1	0	1	0	0	0	0
27.3.17	RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family	2 (0.31%)	1	0	0	0	1	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	2 (0.31%)	0	1	0	1	0	0	0	0
27.3.54	RNA.regulation of transcription.Histone acetyltransferases	2 (0.31%)	1	1	0	0	0	0	0	0
27.3.62	RNA.regulation of transcription.Nucleosome/chromatin assembly factor group	2 (0.31%)	0	0	0	2	0	0	0	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	2 (0.31%)	0	0	0	1	0	0	1	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	2 (0.31%)	1	0	0	1	0	0	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	2 (0.31%)	0	0	0	1	1	0	0	0
29.2.4	protein.synthesis.elongation	2 (0.31%)	0	0	1	0	0	0	1	0
29.3.3	protein.targeting.chloroplast	2 (0.31%)	0	0	0	2	0	0	0	0
29.3.4.1	protein.targeting.secretory pathway.ER	2 (0.31%)	0	1	0	1	0	0	0	0
29.5.11.5	protein.degradation.ubiquitin.ubiquitin protease	2 (0.31%)	0	1	0	0	0	0	0	1
29.5.5	protein.degradation.serine protease	2 (0.31%)	0	1	0	0	1	0	0	0
29.6	protein.folding	2 (0.31%)	1	1	0	0	0	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	2 (0.31%)	0	0	0	0	0	0	0	2
31.2	cell.division	2 (0.31%)	0	0	1	0	0	0	0	1
31.3	cell.cycle	2 (0.31%)	1	0	0	0	0	1	0	0
31.4	cell.vesicle transport	2 (0.31%)	0	0	0	1	0	0	1	0
34.1	transport.p- and v-ATPases	2 (0.31%)	0	0	1	0	1	0	0	0
34.14	transport.unspecified cations	2 (0.31%)	1	0	0	0	0	0	1	0
34.2	transport.sugars	2 (0.31%)	1	0	1	0	0	0	0	0
34.2.1	transport.sugars.sucrose	2 (0.31%)	1	0	1	0	0	0	0	0
4	glycolysis	1 (0.16%)	0	0	1	0	0	0	0	0
7	OPP	1 (0.16%)	0	0	0	0	0	1	0	0
8	TCA / org transformation	1 (0.16%)	0	0	0	1	0	0	0	0
10.1.6	cell wall.precursor synthesis.GAE	1 (0.16%)	1	0	0	0	0	0	0	0
10.2.1	cell wall.cellulose synthesis.cellulose synthase	1 (0.16%)	0	0	0	1	0	0	0	0
11.1.10	lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase	1 (0.16%)	0	0	0	0	0	0	0	1
11.1.3	lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase	1 (0.16%)	0	1	0	0	0	0	0	0
11.9.3.2	lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase	1 (0.16%)	0	0	1	0	0	0	0	0
13.1.6	amino acid metabolism.synthesis.aromatic aa	1 (0.16%)	0	0	0	0	1	0	0	0
13.1.6.5	amino acid metabolism.synthesis.aromatic aa.tryptophan	1 (0.16%)	0	0	0	0	1	0	0	0
16.1.2	secondary metabolism.isoprenoids.mevalonate pathway	1 (0.16%)	1	0	0	0	0	0	0	0
16.1.2.8	secondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase	1 (0.16%)	1	0	0	0	0	0	0	0
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	1 (0.16%)	0	0	0	0	0	0	1	0
16.2.1.10	secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD	1 (0.16%)	0	0	0	0	0	0	1	0
16.8.2.2	secondary metabolism.flavonoids.chalcones.chalcone isomerase	1 (0.16%)	1	0	0	0	0	0	0	0
3.8	minor CHO metabolism.galactose	1 (0.16%)	0	0	0	0	1	0	0	0
4.2	glycolysis.plastid branch	1 (0.16%)	0	0	1	0	0	0	0	0
7.1	OPP.oxidative PP	1 (0.16%)	0	0	0	0	0	1	0	0
8.2	TCA / org transformation.other organic acid transformations	1 (0.16%)	0	0	0	1	0	0	0	0
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	1 (0.16%)	0	0	0	1	0	0	0	0
9.2	mitochondrial electron transport / ATP synthesis.NADH-DH	1 (0.16%)	0	0	0	1	0	0	0	0
9.7	mitochondrial electron transport / ATP synthesis.cytochrome c oxidase	1 (0.16%)	0	0	0	1	0	0	0	0
9.9	mitochondrial electron transport / ATP synthesis.F1-ATPase	1 (0.16%)	0	1	0	0	0	0	0	0
10.2	cell wall.cellulose synthesis	1 (0.16%)	0	0	0	1	0	0	0	0
10.7	cell wall.modification	1 (0.16%)	0	0	0	0	1	0	0	0
13.1	amino acid metabolism.synthesis	1 (0.16%)	0	0	0	0	1	0	0	0
13.99	amino acid metabolism.misc	1 (0.16%)	0	0	0	0	0	0	1	0
15	metal handling	1 (0.16%)	0	0	0	1	0	0	0	0
15.2	metal handling.binding, chelation and storage	1 (0.16%)	0	0	0	1	0	0	0	0
16.1	secondary metabolism.isoprenoids	1 (0.16%)	1	0	0	0	0	0	0	0
16.2	secondary metabolism.phenylpropanoids	1 (0.16%)	0	0	0	0	0	0	1	0
17.4	hormone metabolism.cytokinin	1 (0.16%)	0	0	0	0	0	0	0	1
17.4.2	hormone metabolism.cytokinin.signal transduction	1 (0.16%)	0	0	0	0	0	0	0	1
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	1 (0.16%)	0	0	0	1	0	0	0	0
19	tetrapyrrole synthesis	1 (0.16%)	0	0	0	0	1	0	0	0
19.4	tetrapyrrole synthesis.ALA dehydratase	1 (0.16%)	0	0	0	0	1	0	0	0
20.1.1	stress.biotic.respiratory burst	1 (0.16%)	0	0	1	0	0	0	0	0
20.1.3	stress.biotic.signalling	1 (0.16%)	0	0	0	1	0	0	0	0
20.1.3.1	stress.biotic.signalling.MLO-like	1 (0.16%)	0	0	0	1	0	0	0	0
20.2.4	stress.abiotic.touch/wounding	1 (0.16%)	0	0	0	1	0	0	0	0
20.2.99	stress.abiotic.unspecified	1 (0.16%)	0	0	0	0	1	0	0	0
21	redox	1 (0.16%)	0	0	0	0	1	0	0	0
21.2	redox.ascorbate and glutathione	1 (0.16%)	0	0	0	0	1	0	0	0
23	nucleotide metabolism	1 (0.16%)	1	0	0	0	0	0	0	0
23.3	nucleotide metabolism.salvage	1 (0.16%)	1	0	0	0	0	0	0	0
23.3.1	nucleotide metabolism.salvage.phosphoribosyltransferases	1 (0.16%)	1	0	0	0	0	0	0	0
23.3.1.2	nucleotide metabolism.salvage.phosphoribosyltransferases.hgprt	1 (0.16%)	1	0	0	0	0	0	0	0
25	C1-metabolism	1 (0.16%)	1	0	0	0	0	0	0	0
25.1	C1-metabolism.glycine hydroxymethyltransferase	1 (0.16%)	1	0	0	0	0	0	0	0
26.10	misc.cytochrome P450	1 (0.16%)	0	0	0	1	0	0	0	0
26.1	misc.misc2	1 (0.16%)	0	0	0	0	0	1	0	0
26.5	misc.acyl transferases	1 (0.16%)	1	0	0	0	0	0	0	0
26.7	misc.oxidases - copper, flavone etc	1 (0.16%)	0	0	0	0	0	1	0	0
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	1 (0.16%)	0	1	0	0	0	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.16%)	0	0	0	1	0	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (0.16%)	0	1	0	0	0	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.16%)	0	1	0	0	0	0	0	0
27.3.28	RNA.regulation of transcription.SBP,Squamosa promoter binding protein family	1 (0.16%)	0	0	0	0	0	0	1	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	1 (0.16%)	0	1	0	0	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.16%)	1	0	0	0	0	0	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	1 (0.16%)	0	1	0	0	0	0	0	0
27.3.48	RNA.regulation of transcription.FHA transcription factor	1 (0.16%)	1	0	0	0	0	0	0	0
27.3.5	RNA.regulation of transcription.ARR	1 (0.16%)	0	0	0	0	0	0	0	1
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.16%)	0	0	0	0	0	0	0	1
27.3.52	RNA.regulation of transcription.Global transcription factor group	1 (0.16%)	0	0	0	1	0	0	0	0
27.3.64	RNA.regulation of transcription.PHOR1	1 (0.16%)	0	0	0	1	0	0	0	0
27.3.80	RNA.regulation of transcription.zf-HD	1 (0.16%)	0	0	0	0	0	0	1	0
27.3.85	RNA.regulation of transcription.sigma like plant	1 (0.16%)	1	0	0	0	0	0	0	0
29.2.1.1.2.1.4	protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S4	1 (0.16%)	0	0	0	1	0	0	0	0
29.2.1.1.3.99	protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.unknown	1 (0.16%)	0	0	0	1	0	0	0	0
29.2.1.2.1.18	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18	1 (0.16%)	1	0	0	0	0	0	0	0
29.2.1.2.2.40	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L40	1 (0.16%)	1	0	0	0	0	0	0	0
29.2.2	protein.synthesis.ribosome biogenesis	1 (0.16%)	0	0	0	0	0	0	1	0
29.2.2.50	protein.synthesis.ribosome biogenesis.BRIX	1 (0.16%)	0	0	0	0	0	0	1	0
29.3.4.3	protein.targeting.secretory pathway.vacuole	1 (0.16%)	0	0	0	0	0	0	1	0
29.3.5	protein.targeting.peroxisomes	1 (0.16%)	0	1	0	0	0	0	0	0
29.5.11.2	protein.degradation.ubiquitin.E1	1 (0.16%)	0	1	0	0	0	0	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	1 (0.16%)	0	1	0	0	0	0	0	0
29.5.9	protein.degradation.AAA type	1 (0.16%)	0	0	0	1	0	0	0	0
29.8	protein.assembly and cofactor ligation	1 (0.16%)	0	0	0	0	1	0	0	0
3.2.2	minor CHO metabolism.trehalose.TPP	1 (0.16%)	0	0	0	0	0	0	0	1
3.8.2	minor CHO metabolism.galactose.alpha-galactosidases	1 (0.16%)	0	0	0	0	1	0	0	0
30.1	signalling.in sugar and nutrient physiology	1 (0.16%)	0	1	0	0	0	0	0	0
30.1.2	signalling.in sugar and nutrient physiology.pyruvate dehydrogenase kinase	1 (0.16%)	0	1	0	0	0	0	0	0
30.11	signalling.light	1 (0.16%)	0	0	0	0	0	0	0	1
30.2.5	signalling.receptor kinases.leucine rich repeat V	1 (0.16%)	0	0	0	0	0	0	0	1
30.4	signalling.phosphinositides	1 (0.16%)	0	0	0	0	0	1	0	0
30.6	signalling.MAP kinases	1 (0.16%)	1	0	0	0	0	0	0	0
33.2	development.late embryogenesis abundant	1 (0.16%)	0	0	0	0	1	0	0	0
33.3	development.squamosa promoter binding like (SPL)	1 (0.16%)	0	0	0	0	0	0	1	0
34.12	transport.metal	1 (0.16%)	0	0	0	0	0	1	0	0
34.13	transport.peptides and oligopeptides	1 (0.16%)	0	0	0	0	0	0	0	1
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.16%)	0	0	0	0	0	1	0	0
34.3	transport.amino acids	1 (0.16%)	1	0	0	0	0	0	0	0
34.9	transport.metabolite transporters at the mitochondrial membrane	1 (0.16%)	0	0	0	0	0	0	1	0
34.99	transport.misc	1 (0.16%)	0	0	0	1	0	0	0	0
4.2.3	glycolysis.plastid branch.glucose-6-phosphate isomerase	1 (0.16%)	0	0	1	0	0	0	0	0
7.1.2	OPP.oxidative PP.6-phosphogluconolactonase	1 (0.16%)	0	0	0	0	0	1	0	0
8.2.9	TCA / org transformation.other organic acid transformatons.cyt MDH	1 (0.16%)	0	0	0	1	0	0	0	0
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	1 (0.16%)	0	0	0	1	0	0	0	0
9.2.1	mitochondrial electron transport / ATP synthesis.NADH-DH.type II	1 (0.16%)	0	0	0	1	0	0	0	0
9.2.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external	1 (0.16%)	0	0	0	1	0	0	0	0