PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_65
Name: POC1;PIL1
Description: N/A

#Associated genes: 985
#Associated MapMan terms: 252

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MapMan	Description	#Associated genes	gma	sly
27	RNA	224 (22.74%)	180	44
27.3	RNA.regulation of transcription	221 (22.44%)	177	44
29	protein	75 (7.61%)	59	16
29.4	protein.postranslational modification	56 (5.69%)	45	11
1	PS	52 (5.28%)	40	12
30	signalling	52 (5.28%)	42	10
20	stress	37 (3.76%)	27	10
20.2	stress.abiotic	35 (3.55%)	25	10
33	development	34 (3.45%)	26	8
1.1	PS.lightreaction	31 (3.15%)	24	7
33.99	development.unspecified	29 (2.94%)	23	6
34	transport	29 (2.94%)	18	11
26	misc	24 (2.44%)	20	4
17	hormone metabolism	23 (2.34%)	19	4
28	DNA	22 (2.23%)	11	11
1.3	PS.calvin cycle	21 (2.13%)	16	5
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	21 (2.13%)	17	4
31	cell	21 (2.13%)	16	5
20.2.1	stress.abiotic.heat	18 (1.83%)	13	5
1.1.1	PS.lightreaction.photosystem II	17 (1.73%)	14	3
10	cell wall	17 (1.73%)	12	5
11	lipid metabolism	16 (1.62%)	8	8
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	16 (1.62%)	14	2
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	16 (1.62%)	9	7
30.2	signalling.receptor kinases	16 (1.62%)	12	4
17.2	hormone metabolism.auxin	15 (1.52%)	13	2
27.3.40	RNA.regulation of transcription.Aux/IAA family	15 (1.52%)	12	3
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	15 (1.52%)	12	3
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	15 (1.52%)	12	3
27.3.29	RNA.regulation of transcription.TCP transcription factor family	14 (1.42%)	12	2
28.1	DNA.synthesis/chromatin structure	14 (1.42%)	6	8
15	metal handling	12 (1.22%)	9	3
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	12 (1.22%)	10	2
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	12 (1.22%)	8	4
29.3	protein.targeting	12 (1.22%)	8	4
30.3	signalling.calcium	12 (1.22%)	12	0
31.1	cell.organisation	12 (1.22%)	8	4
2	major CHO metabolism	11 (1.12%)	9	2
15.2	metal handling.binding, chelation and storage	11 (1.12%)	9	2
19	tetrapyrrole synthesis	11 (1.12%)	7	4
27.3.99	RNA.regulation of transcription.unclassified	11 (1.12%)	9	2
10.6	cell wall.degradation	10 (1.02%)	7	3
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	10 (1.02%)	7	3
1.1.1.2	PS.lightreaction.photosystem II.PSII polypeptide subunits	9 (0.91%)	8	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	9 (0.91%)	7	2
2.2	major CHO metabolism.degradation	9 (0.91%)	7	2
20.2.3	stress.abiotic.drought/salt	9 (0.91%)	8	1
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	9 (0.91%)	8	1
29.4.1	protein.postranslational modification.kinase	9 (0.91%)	9	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	8 (0.81%)	6	2
2.2.2	major CHO metabolism.degradation.starch	8 (0.81%)	6	2
16	secondary metabolism	8 (0.81%)	6	2
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	8 (0.81%)	6	2
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	8 (0.81%)	8	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	8 (0.81%)	5	3
30.2.17	signalling.receptor kinases.DUF 26	8 (0.81%)	7	1
1.1.5	PS.lightreaction.other electron carrier (ox/red)	7 (0.71%)	5	2
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	7 (0.71%)	5	2
13	amino acid metabolism	7 (0.71%)	5	2
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	7 (0.71%)	6	1
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	7 (0.71%)	6	1
30.11	signalling.light	7 (0.71%)	6	1
31.2	cell.division	7 (0.71%)	6	1
34.19	transport.Major Intrinsic Proteins	7 (0.71%)	4	3
34.19.2	transport.Major Intrinsic Proteins.TIP	7 (0.71%)	4	3
3	minor CHO metabolism	6 (0.61%)	6	0
13.1	amino acid metabolism.synthesis	6 (0.61%)	5	1
16.1	secondary metabolism.isoprenoids	6 (0.61%)	5	1
19.16	tetrapyrrole synthesis.chlorophyll b synthase	6 (0.61%)	4	2
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	6 (0.61%)	4	2
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	6 (0.61%)	4	2
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	6 (0.61%)	3	3
27.3.50	RNA.regulation of transcription.General Transcription	6 (0.61%)	4	2
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	6 (0.61%)	6	0
28.1.3	DNA.synthesis/chromatin structure.histone	6 (0.61%)	1	5
29.3.1	protein.targeting.nucleus	6 (0.61%)	2	4
29.5	protein.degradation	6 (0.61%)	5	1
1.1.2	PS.lightreaction.photosystem I	5 (0.51%)	4	1
1.1.2.2	PS.lightreaction.photosystem I.PSI polypeptide subunits	5 (0.51%)	4	1
1.1.5.2	PS.lightreaction.other electron carrier (ox/red).ferredoxin	5 (0.51%)	3	2
1.3.2	PS.calvin cycle.rubisco small subunit	5 (0.51%)	4	1
1.3.7	PS.calvin cycle.FBPase	5 (0.51%)	3	2
10.7	cell wall.modification	5 (0.51%)	4	1
13.1.3	amino acid metabolism.synthesis.aspartate family	5 (0.51%)	5	0
13.1.3.1	amino acid metabolism.synthesis.aspartate family.asparagine	5 (0.51%)	5	0
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	5 (0.51%)	4	1
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	5 (0.51%)	4	1
27.3.52	RNA.regulation of transcription.Global transcription factor group	5 (0.51%)	3	2
28.99	DNA.unspecified	5 (0.51%)	3	2
30.1	signalling.in sugar and nutrient physiology	5 (0.51%)	4	1
11.1	lipid metabolism.FA synthesis and FA elongation	4 (0.41%)	3	1
11.8	lipid metabolism.exotics(steroids, squalene etc)	4 (0.41%)	2	2
16.1.4	secondary metabolism.isoprenoids.carotenoids	4 (0.41%)	3	1
17.1.1.1.10	hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase	4 (0.41%)	2	2
17.2.2	hormone metabolism.auxin.signal transduction	4 (0.41%)	4	0
17.5	hormone metabolism.ethylene	4 (0.41%)	4	0
17.5.2	hormone metabolism.ethylene.signal transduction	4 (0.41%)	4	0
19.10	tetrapyrrole synthesis.magnesium chelatase	4 (0.41%)	3	1
24	Biodegradation of Xenobiotics	4 (0.41%)	2	2
26.22	misc.short chain dehydrogenase/reductase (SDR)	4 (0.41%)	4	0
26.3	misc.gluco-, galacto- and mannosidases	4 (0.41%)	3	1
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	4 (0.41%)	2	2
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	4 (0.41%)	3	1
29.3.4	protein.targeting.secretory pathway	4 (0.41%)	4	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	4 (0.41%)	4	0
30.6	signalling.MAP kinases	4 (0.41%)	3	1
33.2	development.late embryogenesis abundant	4 (0.41%)	2	2
34.11	transport.NDP-sugars at the ER	4 (0.41%)	2	2
34.15	transport.potassium	4 (0.41%)	3	1
1.3.12	PS.calvin cycle.PRK	3 (0.30%)	2	1
1.3.13	PS.calvin cycle.rubisco interacting	3 (0.30%)	3	0
1.3.9	PS.calvin cycle.seduheptulose bisphosphatase	3 (0.30%)	2	1
10.6.1	cell wall.degradation.cellulases and beta -1,4-glucanases	3 (0.30%)	2	1
11.1.1	lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation	3 (0.30%)	2	1
11.1.1.1	lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme	3 (0.30%)	2	1
16.1.4.4	secondary metabolism.isoprenoids.carotenoids.lycopene epsilon cyclase	3 (0.30%)	2	1
17.1.3	hormone metabolism.abscisic acid.induced-regulated-responsive-activated	3 (0.30%)	2	1
20.2.2	stress.abiotic.cold	3 (0.30%)	2	1
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase	3 (0.30%)	2	1
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	3 (0.30%)	3	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	3 (0.30%)	3	0
27.3.5	RNA.regulation of transcription.ARR	3 (0.30%)	3	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	3 (0.30%)	3	0
27.3.71	RNA.regulation of transcription.SNF7	3 (0.30%)	3	0
3.1	minor CHO metabolism.raffinose family	3 (0.30%)	3	0
8	TCA / org transformation	3 (0.30%)	3	0
8.2	TCA / org transformation.other organic acid transformations	3 (0.30%)	3	0
11.3	lipid metabolism.Phospholipid synthesis	3 (0.30%)	1	2
17.1	hormone metabolism.abscisic acid	3 (0.30%)	2	1
18	Co-factor and vitamine metabolism	3 (0.30%)	3	0
21	redox	3 (0.30%)	2	1
24.2	Biodegradation of Xenobiotics.lactoylglutathione lyase	3 (0.30%)	2	1
26.2	misc.UDP glucosyl and glucoronyl transferases	3 (0.30%)	3	0
26.23	misc.rhodanese	3 (0.30%)	2	1
26.9	misc.glutathione S transferases	3 (0.30%)	2	1
27.2	RNA.transcription	3 (0.30%)	3	0
28.2	DNA.repair	3 (0.30%)	2	1
30.4	signalling.phosphinositides	3 (0.30%)	1	2
30.4.5	signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase	3 (0.30%)	1	2
30.5	signalling.G-proteins	3 (0.30%)	2	1
34.7	transport.phosphate	3 (0.30%)	2	1
34.99	transport.misc	3 (0.30%)	2	1
8.2.11	TCA / org transformation.other organic acid transformatons.atp-citrate lyase	3 (0.30%)	3	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	2 (0.20%)	1	1
1.1.5.4	PS.lightreaction.other electron carrier (ox/red).ferredoxin oxireductase	2 (0.20%)	2	0
1.3.6	PS.calvin cycle.aldolase	2 (0.20%)	2	0
6	gluconeogenesis / glyoxylate cycle	2 (0.20%)	1	1
11.4	lipid metabolism.TAG synthesis	2 (0.20%)	1	1
11.8.10	lipid metabolism.exotics (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase	2 (0.20%)	0	2
12	N-metabolism	2 (0.20%)	1	1
12.2	N-metabolism.ammonia metabolism	2 (0.20%)	1	1
12.2.1	N-metabolism.ammonia metabolism.glutamate synthase	2 (0.20%)	1	1
16.1.2	secondary metabolism.isoprenoids.mevalonate pathway	2 (0.20%)	2	0
16.1.2.3	secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase	2 (0.20%)	2	0
17.2.1	hormone metabolism.auxin.synthesis-degradation	2 (0.20%)	2	0
2.1	major CHO metabolism.synthesis	2 (0.20%)	2	0
2.2.2.4	major CHO metabolism.degradation.starch.D enzyme	2 (0.20%)	2	0
3.2	minor CHO metabolism.trehalose	2 (0.20%)	2	0
6.5	gluconeogenesis / glyoxylate cycle.pyruvate dikinase	2 (0.20%)	1	1
18.7	Co-factor and vitamine metabolism.iron-sulphur clusters	2 (0.20%)	2	0
20.1	stress.biotic	2 (0.20%)	2	0
21.4	redox.glutaredoxins	2 (0.20%)	2	0
23	nucleotide metabolism	2 (0.20%)	2	0
23.3	nucleotide metabolism.salvage	2 (0.20%)	2	0
26.7	misc.oxidases - copper, flavone etc	2 (0.20%)	1	1
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	2 (0.20%)	2	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	2 (0.20%)	2	0
27.3.14	RNA.regulation of transcription.CCAAT box binding factor family, HAP2	2 (0.20%)	2	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	2 (0.20%)	1	1
27.3.63	RNA.regulation of transcription.PHD finger transcription factor	2 (0.20%)	2	0
29.2.1.1.1.1.17	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S17	2 (0.20%)	2	0
29.2.1.2.1.7	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S7	2 (0.20%)	2	0
29.3.2	protein.targeting.mitochondria	2 (0.20%)	2	0
29.5.11	protein.degradation.ubiquitin	2 (0.20%)	2	0
3.1.1	minor CHO metabolism.raffinose family.galactinol synthases	2 (0.20%)	2	0
3.1.1.2	minor CHO metabolism.raffinose family.galactinol synthases.putative	2 (0.20%)	2	0
3.2.2	minor CHO metabolism.trehalose.TPP	2 (0.20%)	2	0
30.2.99	signalling.receptor kinases.misc	2 (0.20%)	2	0
30.7	signalling.14-3-3 proteins	2 (0.20%)	2	0
34.13	transport.peptides and oligopeptides	2 (0.20%)	2	0
34.16	transport.ABC transporters and multidrug resistance systems	2 (0.20%)	1	1
34.9	transport.metabolite transporters at the mitochondrial membrane	2 (0.20%)	1	1
3.4	minor CHO metabolism.myo-inositol	1 (0.10%)	1	0
10.1	cell wall.precursor synthesis	1 (0.10%)	1	0
10.1.2	cell wall.precursor synthesis.UGE	1 (0.10%)	1	0
10.5	cell wall.cell wall proteins	1 (0.10%)	0	1
10.5.4	cell wall.cell wall proteins.HRGP	1 (0.10%)	0	1
11.1.30	lipid metabolism.FA synthesis and FA elongation.pyruvate kinase	1 (0.10%)	1	0
11.10	lipid metabolism.glycolipid synthesis	1 (0.10%)	1	0
11.10.2	lipid metabolism.glycolipid synthesis.DGDG synthase	1 (0.10%)	1	0
11.3.2	lipid metabolism.Phospholipid synthesis.choline kinase	1 (0.10%)	0	1
11.6	lipid metabolism.lipid transfer proteins etc	1 (0.10%)	0	1
11.8.1	lipid metabolism.exotics (steroids, squalene etc).sphingolipids	1 (0.10%)	1	0
11.8.3	lipid metabolism.exotics (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase	1 (0.10%)	1	0
11.9	lipid metabolism.lipid degradation	1 (0.10%)	0	1
11.9.4	lipid metabolism.lipid degradation.beta-oxidation	1 (0.10%)	0	1
11.9.4.2	lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH	1 (0.10%)	0	1
13.1.5	amino acid metabolism.synthesis.serine-glycine-cysteine group	1 (0.10%)	0	1
13.1.5.3	amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine	1 (0.10%)	0	1
13.2	amino acid metabolism.degradation	1 (0.10%)	0	1
13.2.5	amino acid metabolism.degradation.serine-glycine-cysteine group	1 (0.10%)	0	1
13.2.5.2	amino acid metabolism.degradation.serine-glycine-cysteine group.glycine	1 (0.10%)	0	1
15.3	metal handling.regulation	1 (0.10%)	0	1
16.1.4.1	secondary metabolism.isoprenoids.carotenoids.phytoene synthase	1 (0.10%)	1	0
16.1.4.5	secondary metabolism.isoprenoids.carotenoids.lycopene beta cyclase	1 (0.10%)	0	1
16.2	secondary metabolism.phenylpropanoids	1 (0.10%)	0	1
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	1 (0.10%)	0	1
16.2.1.1	secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL	1 (0.10%)	0	1
16.8	secondary metabolism.flavonoids	1 (0.10%)	1	0
16.8.2	secondary metabolism.flavonoids.chalcones	1 (0.10%)	1	0
17.4	hormone metabolism.cytokinin	1 (0.10%)	0	1
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.10%)	0	1
18.2	Co-factor and vitamine metabolism.thiamine	1 (0.10%)	1	0
19.12	tetrapyrrole synthesis.magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase	1 (0.10%)	0	1
2.1.1	major CHO metabolism.synthesis.sucrose	1 (0.10%)	1	0
2.1.1.1	major CHO metabolism.synthesis.sucrose.SPS	1 (0.10%)	1	0
2.1.2	major CHO metabolism.synthesis.starch	1 (0.10%)	1	0
2.1.2.2	major CHO metabolism.synthesis.starch.starch synthase	1 (0.10%)	1	0
2.2.1	major CHO metabolism.degradation.sucrose	1 (0.10%)	1	0
2.2.1.3	major CHO metabolism.degradation.sucrose.invertases	1 (0.10%)	1	0
2.2.1.3.1	major CHO metabolism.degradation.sucrose.invertases.neutral	1 (0.10%)	1	0
21.2	redox.ascorbate and glutathione	1 (0.10%)	0	1
21.2.1	redox.ascorbate and glutathione.ascorbate	1 (0.10%)	0	1
23.3.1	nucleotide metabolism.salvage.phosphoribosyltransferases	1 (0.10%)	1	0
23.3.1.3	nucleotide metabolism.salvage.phosphoribosyltransferases.upp	1 (0.10%)	1	0
23.3.3	nucleotide metabolism.salvage.NUDIX hydrolases	1 (0.10%)	1	0
26.10	misc.cytochrome P450	1 (0.10%)	1	0
26.13	misc.acid and other phosphatases	1 (0.10%)	1	0
26.18	misc.invertase/pectin methylesterase inhibitor family protein	1 (0.10%)	1	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.10%)	1	0
27.3.42	RNA.regulation of transcription.Bromodomain proteins	1 (0.10%)	0	1
27.3.57	RNA.regulation of transcription.JUMONJI family	1 (0.10%)	1	0
27.3.59	RNA.regulation of transcription.Methyl binding domain proteins	1 (0.10%)	1	0
29.2	protein.synthesis	1 (0.10%)	1	0
29.2.1.1.1.1.530	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S30A	1 (0.10%)	1	0
29.2.1.1.3.1.6	protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6	1 (0.10%)	1	0
29.2.1.99.99	protein.synthesis.ribosomal protein.unknown.unknown	1 (0.10%)	0	1
29.2.3	protein.synthesis.initiation	1 (0.10%)	1	0
29.4.1.56	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI	1 (0.10%)	1	0
29.5.11.5	protein.degradation.ubiquitin.ubiquitin protease	1 (0.10%)	1	0
29.5.9	protein.degradation.AAA type	1 (0.10%)	1	0
3.1.2	minor CHO metabolism.raffinose family.raffinose synthases	1 (0.10%)	1	0
3.1.2.2	minor CHO metabolism.raffinose family.raffinose synthases.putative	1 (0.10%)	1	0
3.4.3	minor CHO metabolism.myo-inositol.InsP Synthases	1 (0.10%)	1	0
30.1.1	signalling.in sugar and nutrient physiology	1 (0.10%)	0	1
30.1.2	signalling.in sugar and nutrient physiology.pyruvate dehydrogenase kinase	1 (0.10%)	1	0
31.3	cell.cycle	1 (0.10%)	1	0
31.3.1	cell.cycle.peptidylprolyl isomerase	1 (0.10%)	1	0
31.4	cell.vesicle transport	1 (0.10%)	1	0
33.3	development.squamosa promoter binding like (SPL)	1 (0.10%)	1	0
34.1	transport.p- and v-ATPases	1 (0.10%)	0	1
34.12	transport.metal	1 (0.10%)	1	0