MapMan terms associated with a binding site

Binding site
Matrix_446
Name
LBD16
Description
N/A
#Associated genes
577
#Associated MapMan terms
196

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MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA102 (17.68%)1111062315155016
27.3RNA.regulation of transcription89 (15.42%)1110052111114016
29protein41 (7.11%)03086107106
31cell33 (5.72%)2303485404
29.4protein.postranslational modification25 (4.33%)0106466002
29.5.11.4.2protein.degradation.ubiquitin.E3.RING24 (4.16%)0108523005
30signalling21 (3.64%)2203282101
34transport18 (3.12%)1100572101
26misc17 (2.95%)4002422003
17hormone metabolism16 (2.77%)2102045002
17.2hormone metabolism.auxin13 (2.25%)1102034002
10cell wall12 (2.08%)1101332001
20stress11 (1.91%)0103231001
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family11 (1.91%)1100302103
31.1cell.organisation11 (1.91%)0001221203
31.3cell.cycle11 (1.91%)1202032100
33development11 (1.91%)0100311302
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated10 (1.73%)1102023001
27.3.25RNA.regulation of transcription.MYB domain transcription factor family10 (1.73%)1100411101
28DNA10 (1.73%)0001232101
29.5protein.degradation10 (1.73%)0201211003
17.1.1.1.10hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase9 (1.56%)1400020101
27.1RNA.processing9 (1.56%)0101133000
27.3.67RNA.regulation of transcription.putative transcription regulator9 (1.56%)1200212001
21redox8 (1.39%)2100201002
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP8 (1.39%)2003110001
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX8 (1.39%)0101111102
30.3signalling.calcium8 (1.39%)1201022000
31.4cell.vesicle transport8 (1.39%)1000221101
11lipid metabolism7 (1.21%)1101012001
9mitochondrial electron transport / ATP synthesis6 (1.04%)1000121001
10.7cell wall.modification6 (1.04%)1001210001
20.1stress.biotic6 (1.04%)0003011001
27.3.37RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family6 (1.04%)0000401001
28.1DNA.synthesis/chromatin structure6 (1.04%)0000221100
33.99development.unspecified6 (1.04%)0100100301
13amino acid metabolism5 (0.87%)0101210000
20.2stress.abiotic5 (0.87%)0100220000
21.2redox.ascorbate and glutathione5 (0.87%)2000200001
21.2.1redox.ascorbate and glutathione.ascorbate5 (0.87%)2000200001
21.2.1.2redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase5 (0.87%)2000200001
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family5 (0.87%)0001210001
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family5 (0.87%)0200011001
27.4RNA.RNA binding5 (0.87%)0000211100
29.3protein.targeting5 (0.87%)0001030001
26.7misc.oxidases - copper, flavone etc4 (0.69%)1000200001
27.3.11RNA.regulation of transcription.C2H2 zinc finger family4 (0.69%)1000021000
27.3.35RNA.regulation of transcription.bZIP transcription factor family4 (0.69%)0200011000
27.3.99RNA.regulation of transcription.unclassified4 (0.69%)1000101100
29.5.9protein.degradation.AAA type4 (0.69%)0200100001
30.2signalling.receptor kinases4 (0.69%)0000030001
30.2.11signalling.receptor kinases.leucine rich repeat XI4 (0.69%)0000030001
30.5signalling.G-proteins4 (0.69%)1000120000
33.3development.squamosa promoter binding like (SPL)4 (0.69%)0000201001
1PS3 (0.52%)0000100101
1.1PS.lightreaction3 (0.52%)0000100101
2major CHO metabolism3 (0.52%)1000101000
2.1major CHO metabolism.synthesis3 (0.52%)1000101000
13.1amino acid metabolism.synthesis3 (0.52%)0100200000
17.2.2hormone metabolism.auxin.signal transduction3 (0.52%)0000011001
2.1.2major CHO metabolism.synthesis.starch3 (0.52%)1000101000
2.1.2.1major CHO metabolism.synthesis.starch.AGPase3 (0.52%)1000101000
18Co-factor and vitamine metabolism3 (0.52%)0000001101
20.2.1stress.abiotic.heat3 (0.52%)0100110000
21.3redox.heme3 (0.52%)0100001001
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family3 (0.52%)0001000101
27.3.62RNA.regulation of transcription.Nucleosome/chromatin assembly factor group3 (0.52%)1000100001
29.5.11protein.degradation.ubiquitin3 (0.52%)0000101001
30.4signalling.phosphinositides3 (0.52%)0002010000
31.2cell.division3 (0.52%)0100011000
34.1transport.p- and v-ATPases3 (0.52%)0000021000
34.14transport.unspecified cations3 (0.52%)0000200001
34.9transport.metabolite transporters at the mitochondrial membrane3 (0.52%)0000111000
1.1.2PS.lightreaction.photosystem I2 (0.35%)0000100100
1.1.2.2PS.lightreaction.photosystem I.PSI polypeptide subunits2 (0.35%)0000100100
3minor CHO metabolism2 (0.35%)0100001000
10.5cell wall.cell wall proteins2 (0.35%)0000011000
10.6cell wall.degradation2 (0.35%)0000110000
11.1lipid metabolism.FA synthesis and FA elongation2 (0.35%)0000001001
11.1.9lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase2 (0.35%)0000001001
11.3lipid metabolism.Phospholipid synthesis2 (0.35%)0000011000
11.3.10lipid metabolism.Phospholipid synthesis.(S)-coclaurine-N-methyltransferase2 (0.35%)0000011000
11.9lipid metabolism.lipid degradation2 (0.35%)0101000000
13.1.5amino acid metabolism.synthesis.serine-glycine-cysteine group2 (0.35%)0000200000
13.1.5.3amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine2 (0.35%)0000200000
13.1.5.3.2amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT2 (0.35%)0000200000
9.1mitochondrial electron transport / ATP synthesis.NADH-DH2 (0.35%)0000110000
9.3mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein2 (0.35%)0000010001
16secondary metabolism2 (0.35%)0000010100
17.4hormone metabolism.cytokinin2 (0.35%)0000011000
20.1.1stress.biotic.respiratory burst2 (0.35%)0001001000
20.1.3stress.biotic.signalling2 (0.35%)0001010000
20.1.3.1stress.biotic.signalling.MLO-like2 (0.35%)0001010000
23nucleotide metabolism2 (0.35%)0000010001
26.13misc.acid and other phosphatases2 (0.35%)0001000001
26.22misc.short chain dehydrogenase/reductase (SDR)2 (0.35%)0001010000
26.3misc.gluco-, galacto- and mannosidases2 (0.35%)0000010001
26.4misc.beta 1,3 glucan hydrolases2 (0.35%)1000100000
26.4.1misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase2 (0.35%)1000100000
27.1.1RNA.processing.splicing2 (0.35%)0000101000
27.1.2RNA.processing.RNA helicase2 (0.35%)0000020000
27.3.26RNA.regulation of transcription.MYB-related transcription factor family2 (0.35%)1000100000
27.3.32RNA.regulation of transcription.WRKY domain transcription factor family2 (0.35%)0000100001
27.3.4RNA.regulation of transcription.ARF, Auxin Response Factor family2 (0.35%)0100010000
27.3.8RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family2 (0.35%)0000010001
28.2DNA.repair2 (0.35%)0001000001
28.99DNA.unspecified2 (0.35%)0000011000
29.2.1.1.1.2.2protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22 (0.35%)0000020000
29.3.4protein.targeting.secretory pathway2 (0.35%)0000010001
29.4.1protein.postranslational modification.kinase2 (0.35%)0100010000
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII2 (0.35%)0100010000
30.4.1signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase2 (0.35%)0001010000
34.16transport.ABC transporters and multidrug resistance systems2 (0.35%)0000010100
34.21transport.calcium2 (0.35%)0000110000
34.22transport.cyclic nucleotide or calcium regulated channels2 (0.35%)1100000000
1.1.1PS.lightreaction.photosystem II1 (0.17%)0000000001
1.1.1.1PS.lightreaction.photosystem II.LHC-II1 (0.17%)0000000001
10.1cell wall.precursor synthesis1 (0.17%)0000001000
10.1.6cell wall.precursor synthesis.GAE1 (0.17%)0000001000
10.2cell wall.cellulose synthesis1 (0.17%)0100000000
10.2.2cell wall.cellulose synthesis.COBRA1 (0.17%)0100000000
10.5.4cell wall.cell wall proteins.HRGP1 (0.17%)0000001000
10.5.5cell wall.cell wall proteins.RGP1 (0.17%)0000010000
10.6.1cell wall.degradation.cellulases and beta -1,4-glucanases1 (0.17%)0000010000
10.6.3cell wall.degradation.pectate lyases and polygalacturonases1 (0.17%)0000100000
11.10lipid metabolism.glycolipid synthesis1 (0.17%)1000000000
11.10.1lipid metabolism.glycolipid synthesis.MGDG synthase1 (0.17%)1000000000
11.9.2lipid metabolism.lipid degradation.lipases1 (0.17%)0001000000
11.9.3lipid metabolism.lipid degradation.lysophospholipases1 (0.17%)0100000000
11.9.3.4lipid metabolism.lipid degradation.lysophospholipases.phospholipase A21 (0.17%)0100000000
13.1.4amino acid metabolism.synthesis.branched chain group1 (0.17%)0100000000
13.1.4.4amino acid metabolism.synthesis.branched chain group.leucine specific1 (0.17%)0100000000
13.1.4.4.1amino acid metabolism.synthesis.branched chain group.leucine specific.2-isopropylmalate synthase1 (0.17%)0100000000
13.2amino acid metabolism.degradation1 (0.17%)0001000000
13.2.2amino acid metabolism.degradation.glutamate family1 (0.17%)0001000000
13.2.2.3amino acid metabolism.degradation.glutamate family.arginine1 (0.17%)0001000000
13.99amino acid metabolism.misc1 (0.17%)0000010000
15.2metal handling.binding, chelation and storage1 (0.17%)0000010000
16.1secondary metabolism.isoprenoids1 (0.17%)0000000100
16.1.5secondary metabolism.isoprenoids.terpenoids1 (0.17%)0000000100
16.2secondary metabolism.phenylpropanoids1 (0.17%)0000010000
17.3hormone metabolism.brassinosteroid1 (0.17%)1000000000
17.3.2hormone metabolism.brassinosteroid.signal transduction1 (0.17%)1000000000
17.3.2.99hormone metabolism.brassinosteroid.signal transduction.other1 (0.17%)1000000000
17.4.1hormone metabolism.cytokinin.synthesis-degradation1 (0.17%)0000001000
17.4.2hormone metabolism.cytokinin.signal transduction1 (0.17%)0000010000
20.2.2stress.abiotic.cold1 (0.17%)0000010000
22.1polyamine metabolism.synthesis1 (0.17%)0001000000
22.1.3polyamine metabolism.synthesis.arginine decarboxylase1 (0.17%)0001000000
23.2nucleotide metabolism.degradation1 (0.17%)0000000001
23.4nucleotide metabolism.phosphotransfer and pyrophosphatases1 (0.17%)0000010000
23.4.1nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase1 (0.17%)0000010000
26.10misc.cytochrome P4501 (0.17%)1000000000
26.2misc.UDP glucosyl and glucoronyl transferases1 (0.17%)0000001000
26.21misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein1 (0.17%)1000000000
26.24misc.GCN5-related N-acetyltransferase1 (0.17%)0000100000
26.3.4misc.gluco-, galacto- and mannosidases.endoglucanase1 (0.17%)0000010000
26.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases1 (0.17%)0000001000
27.3.29RNA.regulation of transcription.TCP transcription factor family1 (0.17%)0100000000
27.3.30RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family1 (0.17%)0000001000
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors1 (0.17%)1000000000
27.3.5RNA.regulation of transcription.ARR1 (0.17%)0000100000
27.3.52RNA.regulation of transcription.Global transcription factor group1 (0.17%)1000000000
27.3.57RNA.regulation of transcription.JUMONJI family1 (0.17%)0000000001
27.3.63RNA.regulation of transcription.PHD finger transcription factor1 (0.17%)0000000001
27.3.65RNA.regulation of transcription.Polycomb Group (PcG)1 (0.17%)0000000001
27.3.68RNA.regulation of transcription.PWWP domain protein1 (0.17%)0000010000
29.2.1.1.1.2.29protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L291 (0.17%)0000010000
29.2.1.2.2.38protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L381 (0.17%)0000000001
29.3.3protein.targeting.chloroplast1 (0.17%)0000010000
29.3.4.2protein.targeting.secretory pathway.golgi1 (0.17%)0000010000
29.3.4.99protein.targeting.secretory pathway.unspecified1 (0.17%)0000000001
29.5.2protein.degradation.autophagy1 (0.17%)0000000001
29.5.3protein.degradation.cysteine protease1 (0.17%)0000010000
29.5.5protein.degradation.serine protease1 (0.17%)0001000000
3.1minor CHO metabolism.raffinose family1 (0.17%)0000001000
29.8protein.assembly and cofactor ligation1 (0.17%)0000000100
3.1.1minor CHO metabolism.raffinose family.galactinol synthases1 (0.17%)0000001000
3.1.1.2minor CHO metabolism.raffinose family.galactinol synthases.putative1 (0.17%)0000001000
3.6minor CHO metabolism.callose1 (0.17%)0100000000
4glycolysis1 (0.17%)0000000100
30.1signalling.in sugar and nutrient physiology1 (0.17%)0000100000
30.11signalling.light1 (0.17%)0000000100
31.2.5cell.division.plastid1 (0.17%)0100000000
4.3glycolysis.unclear/dually targeted1 (0.17%)0000000100
33.1development.storage proteins1 (0.17%)0000010000
34.17transport.peroxisomes1 (0.17%)0000010000
34.99transport.misc1 (0.17%)0000010000
4.3.6glycolysis.unclear/dually targeted.fructose-2,6-bisphosphatase (Fru2,6BisPase)1 (0.17%)0000000100
9.1.1mitochondrial electron transport / ATP synthesis.NADH-DH.complex I1 (0.17%)0000010000
9.1.1.5mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase1 (0.17%)0000010000
9.1.2mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear1 (0.17%)0000100000
9.6mitochondrial electron transport / ATP synthesis.cytochrome c1 (0.17%)1000000000
9.8mitochondrial electron transport / ATP synthesis.uncoupling protein1 (0.17%)0000001000
15metal handling1 (0.17%)0000010000
22polyamine metabolism1 (0.17%)0001000000