PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_373
Name: E2FE
Description: N/A

#Associated genes: 521
#Associated MapMan terms: 167

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	70 (13.44%)	1	3	4	21	22	7	7	5
28	DNA	67 (12.86%)	2	3	4	23	15	3	10	7
27.3	RNA.regulation of transcription	65 (12.48%)	1	3	3	21	22	6	6	3
28.1	DNA.synthesis/chromatin structure	42 (8.06%)	0	2	1	15	11	2	7	4
31	cell	41 (7.87%)	4	5	4	13	8	2	3	2
29	protein	34 (6.53%)	1	4	0	12	7	3	4	3
30	signalling	25 (4.80%)	2	1	2	9	8	0	2	1
28.2	DNA.repair	23 (4.41%)	2	1	3	8	3	1	2	3
31.2	cell.division	18 (3.45%)	1	1	3	5	5	0	2	1
29.4	protein.postranslational modification	17 (3.26%)	0	1	0	6	2	2	3	3
31.1	cell.organisation	15 (2.88%)	2	1	1	5	3	2	1	0
33	development	10 (1.92%)	1	1	0	4	3	0	0	1
29.5	protein.degradation	9 (1.73%)	1	1	0	2	4	1	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	9 (1.73%)	1	1	0	2	2	1	0	2
20	stress	8 (1.54%)	0	0	0	2	2	0	2	2
27.3.42	RNA.regulation of transcription.Bromodomain proteins	8 (1.54%)	0	2	1	2	2	1	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	8 (1.54%)	1	1	2	1	3	0	0	0
30.2	signalling.receptor kinases	8 (1.54%)	0	0	0	5	1	0	2	0
30.5	signalling.G-proteins	8 (1.54%)	2	1	1	0	3	0	0	1
31.3	cell.cycle	8 (1.54%)	1	3	0	3	0	0	0	1
33.99	development.unspecified	8 (1.54%)	0	1	0	4	3	0	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	7 (1.34%)	0	1	0	0	2	1	2	1
27.3.99	RNA.regulation of transcription.unclassified	7 (1.34%)	1	0	1	3	0	1	1	0
34	transport	7 (1.34%)	0	0	0	2	4	1	0	0
10	cell wall	6 (1.15%)	1	0	0	3	2	0	0	0
17	hormone metabolism	6 (1.15%)	0	0	1	3	2	0	0	0
20.2	stress.abiotic	6 (1.15%)	0	0	0	1	1	0	2	2
26	misc	6 (1.15%)	0	0	1	1	2	1	0	1
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	6 (1.15%)	0	0	0	3	1	0	1	1
29.4.1	protein.postranslational modification.kinase	6 (1.15%)	0	1	0	3	0	0	1	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	6 (1.15%)	0	1	0	3	0	0	1	1
30.2.3	signalling.receptor kinases.leucine rich repeat III	6 (1.15%)	0	0	0	3	1	0	2	0
3	minor CHO metabolism	5 (0.96%)	0	0	0	3	2	0	0	0
9	mitochondrial electron transport / ATP synthesis	5 (0.96%)	0	0	0	2	0	0	0	3
29.5.1	protein.degradation.subtilases	5 (0.96%)	1	1	0	1	1	1	0	0
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	5 (0.96%)	0	0	0	2	0	0	0	3
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	5 (0.96%)	0	0	0	2	0	0	0	3
2	major CHO metabolism	4 (0.77%)	1	0	0	1	2	0	0	0
3.5	minor CHO metabolism.others	4 (0.77%)	0	0	0	2	2	0	0	0
15	metal handling	4 (0.77%)	0	0	0	2	2	0	0	0
15.2	metal handling.binding, chelation and storage	4 (0.77%)	0	0	0	2	2	0	0	0
19	tetrapyrrole synthesis	4 (0.77%)	0	0	0	1	1	0	1	1
27.3.62	RNA.regulation of transcription.Nucleosome/chromatin assembly factor group	4 (0.77%)	0	0	0	4	0	0	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	4 (0.77%)	0	0	0	3	1	0	0	0
30.3	signalling.calcium	4 (0.77%)	0	0	0	2	2	0	0	0
1	PS	3 (0.58%)	0	0	0	1	0	0	0	2
1.1	PS.lightreaction	3 (0.58%)	0	0	0	1	0	0	0	2
2.2	major CHO metabolism.degradation	3 (0.58%)	1	0	0	0	2	0	0	0
10.7	cell wall.modification	3 (0.58%)	0	0	0	2	1	0	0	0
16	secondary metabolism	3 (0.58%)	0	0	0	1	2	0	0	0
17.5	hormone metabolism.ethylene	3 (0.58%)	0	0	1	1	1	0	0	0
19.1	tetrapyrrole synthesis.glu-tRNA synthetase	3 (0.58%)	0	0	0	0	1	0	1	1
2.2.2	major CHO metabolism.degradation.starch	3 (0.58%)	1	0	0	0	2	0	0	0
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	3 (0.58%)	1	0	0	0	2	0	0	0
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	3 (0.58%)	1	0	0	0	2	0	0	0
20.2.1	stress.abiotic.heat	3 (0.58%)	0	0	0	0	1	0	1	1
23	nucleotide metabolism	3 (0.58%)	0	2	0	0	1	0	0	0
27.3.18	RNA.regulation of transcription.E2F/DP transcription factor family	3 (0.58%)	0	0	1	0	1	0	1	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	3 (0.58%)	0	0	0	2	0	0	0	1
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	3 (0.58%)	0	0	0	0	3	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	3 (0.58%)	0	0	0	1	1	1	0	0
27.4	RNA.RNA binding	3 (0.58%)	0	0	1	0	0	1	0	1
29.3	protein.targeting	3 (0.58%)	0	1	0	2	0	0	0	0
29.5.11	protein.degradation.ubiquitin	3 (0.58%)	0	0	0	1	2	0	0	0
30.1	signalling.in sugar and nutrient physiology	3 (0.58%)	0	0	0	1	2	0	0	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	2 (0.38%)	0	0	0	0	0	0	0	2
10.1	cell wall.precursor synthesis	2 (0.38%)	0	0	0	1	1	0	0	0
10.1.2	cell wall.precursor synthesis.UGE	2 (0.38%)	0	0	0	1	1	0	0	0
11	lipid metabolism	2 (0.38%)	0	0	0	1	1	0	0	0
16.1	secondary metabolism.isoprenoids	2 (0.38%)	0	0	0	1	1	0	0	0
16.1.2	secondary metabolism.isoprenoids.mevalonate pathway	2 (0.38%)	0	0	0	1	1	0	0	0
16.1.2.3	secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase	2 (0.38%)	0	0	0	1	1	0	0	0
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	2 (0.38%)	0	0	1	0	1	0	0	0
20.1	stress.biotic	2 (0.38%)	0	0	0	1	1	0	0	0
20.2.3	stress.abiotic.drought/salt	2 (0.38%)	0	0	0	1	0	0	0	1
26.17	misc.dynamin	2 (0.38%)	0	0	0	1	1	0	0	0
26.7	misc.oxidases - copper, flavone etc	2 (0.38%)	0	0	0	0	1	0	0	1
26.9	misc.glutathione S transferases	2 (0.38%)	0	0	1	0	0	1	0	0
27.1	RNA.processing	2 (0.38%)	0	0	0	0	0	0	1	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	2 (0.38%)	0	0	0	1	1	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	2 (0.38%)	0	0	0	1	0	0	1	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	2 (0.38%)	0	0	0	0	2	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	2 (0.38%)	0	0	0	0	1	1	0	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	2 (0.38%)	0	0	0	0	1	1	0	0
28.99	DNA.unspecified	2 (0.38%)	0	0	0	0	1	0	1	0
29.1	protein.aa activation	2 (0.38%)	0	0	0	1	0	0	1	0
29.2	protein.synthesis	2 (0.38%)	0	1	0	0	1	0	0	0
29.2.2	protein.synthesis.ribosome biogenesis	2 (0.38%)	0	1	0	0	1	0	0	0
29.2.2.3	protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications	2 (0.38%)	0	1	0	0	1	0	0	0
29.3.1	protein.targeting.nucleus	2 (0.38%)	0	0	0	2	0	0	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	2 (0.38%)	0	0	0	2	0	0	0	0
30.4	signalling.phosphinositides	2 (0.38%)	0	0	1	1	0	0	0	0
33.1	development.storage proteins	2 (0.38%)	1	0	0	0	0	0	0	1
34.10	transport.nucleotides	2 (0.38%)	0	0	0	0	2	0	0	0
34.13	transport.peptides and oligopeptides	2 (0.38%)	0	0	0	0	2	0	0	0
34.3	transport.amino acids	2 (0.38%)	0	0	0	2	0	0	0	0
1.1.1	PS.lightreaction.photosystem II	1 (0.19%)	0	0	0	1	0	0	0	0
1.1.1.2	PS.lightreaction.photosystem II.PSII polypeptide subunits	1 (0.19%)	0	0	0	1	0	0	0	0
10.6	cell wall.degradation	1 (0.19%)	1	0	0	0	0	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.19%)	1	0	0	0	0	0	0	0
11.1	lipid metabolism.FA synthesis and FA elongation	1 (0.19%)	0	0	0	1	0	0	0	0
11.1.1	lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation	1 (0.19%)	0	0	0	1	0	0	0	0
11.3	lipid metabolism.Phospholipid synthesis	1 (0.19%)	0	0	0	0	1	0	0	0
13	amino acid metabolism	1 (0.19%)	1	0	0	0	0	0	0	0
13.1.6.1.10	amino acid metabolism.synthesis.aromatic aa.chorismate.dehydroquinate/shikimate dehydrogenase	1 (0.19%)	0	0	0	0	1	0	0	0
13.99	amino acid metabolism.misc	1 (0.19%)	1	0	0	0	0	0	0	0
16.8	secondary metabolism.flavonoids	1 (0.19%)	0	0	0	0	1	0	0	0
16.8.2	secondary metabolism.flavonoids.chalcones	1 (0.19%)	0	0	0	0	1	0	0	0
17.3	hormone metabolism.brassinosteroid	1 (0.19%)	0	0	0	1	0	0	0	0
17.3.1	hormone metabolism.brassinosteroid.synthesis-degradation	1 (0.19%)	0	0	0	1	0	0	0	0
17.3.1.2	hormone metabolism.brassinosteroid.synthesis-degradation.sterols	1 (0.19%)	0	0	0	1	0	0	0	0
17.3.1.2.2	hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2	1 (0.19%)	0	0	0	1	0	0	0	0
17.4	hormone metabolism.cytokinin	1 (0.19%)	0	0	0	0	1	0	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.19%)	0	0	0	0	1	0	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	1 (0.19%)	0	0	0	1	0	0	0	0
17.6.2	hormone metabolism.gibberelin.signal transduction	1 (0.19%)	0	0	0	1	0	0	0	0
2.1	major CHO metabolism.synthesis	1 (0.19%)	0	0	0	1	0	0	0	0
3.1	minor CHO metabolism.raffinose family	1 (0.19%)	0	0	0	1	0	0	0	0
17.6	hormone metabolism.gibberelin	1 (0.19%)	0	0	0	1	0	0	0	0
18	Co-factor and vitamine metabolism	1 (0.19%)	0	0	1	0	0	0	0	0
18.7	Co-factor and vitamine metabolism.iron-sulphur clusters	1 (0.19%)	0	0	1	0	0	0	0	0
19.16	tetrapyrrole synthesis.chlorophyll b synthase	1 (0.19%)	0	0	0	1	0	0	0	0
2.1.2	major CHO metabolism.synthesis.starch	1 (0.19%)	0	0	0	1	0	0	0	0
2.1.2.2	major CHO metabolism.synthesis.starch.starch synthase	1 (0.19%)	0	0	0	1	0	0	0	0
20.2.99	stress.abiotic.unspecified	1 (0.19%)	0	0	0	0	0	0	1	0
21	redox	1 (0.19%)	0	0	0	1	0	0	0	0
21.2	redox.ascorbate and glutathione	1 (0.19%)	0	0	0	1	0	0	0	0
21.2.1	redox.ascorbate and glutathione.ascorbate	1 (0.19%)	0	0	0	1	0	0	0	0
22	polyamine metabolism	1 (0.19%)	0	0	0	0	0	0	1	0
22.1	polyamine metabolism.synthesis	1 (0.19%)	0	0	0	0	0	0	1	0
22.1.2	polyamine metabolism.synthesis.SAM decarboxylase	1 (0.19%)	0	0	0	0	0	0	1	0
23.1	nucleotide metabolism.synthesis	1 (0.19%)	0	1	0	0	0	0	0	0
23.1.2	nucleotide metabolism.synthesis.purine	1 (0.19%)	0	1	0	0	0	0	0	0
23.1.2.6	nucleotide metabolism.synthesis.purine.AIR carboxylase	1 (0.19%)	0	1	0	0	0	0	0	0
23.3	nucleotide metabolism.salvage	1 (0.19%)	0	0	0	0	1	0	0	0
23.3.1	nucleotide metabolism.salvage.phosphoribosyltransferases	1 (0.19%)	0	0	0	0	1	0	0	0
23.3.1.3	nucleotide metabolism.salvage.phosphoribosyltransferases.upp	1 (0.19%)	0	0	0	0	1	0	0	0
23.5	nucleotide metabolism.deoxynucleotide metabolism	1 (0.19%)	0	1	0	0	0	0	0	0
23.5.4	nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase	1 (0.19%)	0	1	0	0	0	0	0	0
3.1.2	minor CHO metabolism.raffinose family.raffinose synthases	1 (0.19%)	0	0	0	1	0	0	0	0
3.1.2.2	minor CHO metabolism.raffinose family.raffinose synthases.putative	1 (0.19%)	0	0	0	1	0	0	0	0
24	Biodegradation of Xenobiotics	1 (0.19%)	0	0	0	0	1	0	0	0
24.2	Biodegradation of Xenobiotics.lactoylglutathione lyase	1 (0.19%)	0	0	0	0	1	0	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	1 (0.19%)	0	0	0	0	1	0	0	0
27.3.17	RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family	1 (0.19%)	0	0	0	0	1	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.19%)	0	0	0	0	1	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	1 (0.19%)	0	0	0	1	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.19%)	0	0	0	1	0	0	0	0
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.19%)	0	0	0	0	1	0	0	0
27.3.52	RNA.regulation of transcription.Global transcription factor group	1 (0.19%)	0	0	0	0	1	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.19%)	0	0	0	0	1	0	0	0
27.3.68	RNA.regulation of transcription.PWWP domain protein	1 (0.19%)	0	0	0	0	1	0	0	0
27.3.71	RNA.regulation of transcription.SNF7	1 (0.19%)	0	0	0	1	0	0	0	0
27.3.80	RNA.regulation of transcription.zf-HD	1 (0.19%)	0	0	0	1	0	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (0.19%)	0	0	0	1	0	0	0	0
29.1.22	protein.aa activation.asparagine-tRNA ligase	1 (0.19%)	0	0	0	1	0	0	0	0
29.1.9	protein.aa activation.valine-tRNA ligase	1 (0.19%)	0	0	0	0	0	0	1	0
29.2.1.2.1.8	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8	1 (0.19%)	0	0	0	1	0	0	0	0
29.2.2.3.3	protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases	1 (0.19%)	0	0	0	0	1	0	0	0
29.2.2.3.4	protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins	1 (0.19%)	0	1	0	0	0	0	0	0
29.3.4	protein.targeting.secretory pathway	1 (0.19%)	0	1	0	0	0	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.19%)	0	1	0	0	0	0	0	0
29.5.11.20	protein.degradation.ubiquitin.proteasom	1 (0.19%)	0	0	0	0	1	0	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	1 (0.19%)	0	0	0	0	1	0	0	0
29.6	protein.folding	1 (0.19%)	0	0	0	1	0	0	0	0
30.4.3	signalling.phosphinositides.bis(5-nucleosyl)-tetraphosphatase	1 (0.19%)	0	0	1	0	0	0	0	0
34.99	transport.misc	1 (0.19%)	0	0	0	0	0	1	0	0