PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_240
Name: AT4G29000
Description: N/A

#Associated genes: 320
#Associated MapMan terms: 144

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	46 (14.38%)	1	6	0	15	13	4	0	7
27.3	RNA.regulation of transcription	42 (13.13%)	1	6	0	14	11	4	0	6
29	protein	32 (10.00%)	1	5	3	4	11	5	0	3
31	cell	22 (6.88%)	2	2	1	4	6	3	1	3
29.4	protein.postranslational modification	19 (5.94%)	1	3	2	3	6	3	0	1
3	minor CHO metabolism	17 (5.31%)	0	2	1	6	2	4	1	1
30	signalling	16 (5.00%)	1	2	1	0	7	1	2	2
31.1	cell.organisation	16 (5.00%)	2	1	1	3	4	2	0	3
3.6	minor CHO metabolism.callose	13 (4.06%)	0	1	1	5	1	3	1	1
29.4.1	protein.postranslational modification.kinase	10 (3.13%)	0	2	1	1	3	2	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	10 (3.13%)	0	2	1	1	3	2	0	1
17	hormone metabolism	8 (2.50%)	0	0	1	2	4	0	0	1
26	misc	8 (2.50%)	0	1	0	2	1	3	0	1
30.2	signalling.receptor kinases	7 (2.19%)	0	0	1	0	6	0	0	0
10	cell wall	6 (1.88%)	0	0	0	2	3	1	0	0
20	stress	6 (1.88%)	1	1	0	1	2	1	0	0
29.5	protein.degradation	6 (1.88%)	0	1	1	1	1	0	0	2
33	development	6 (1.88%)	2	1	0	1	1	0	1	0
33.99	development.unspecified	6 (1.88%)	2	1	0	1	1	0	1	0
34	transport	6 (1.88%)	0	0	0	2	2	0	0	2
20.2	stress.abiotic	5 (1.56%)	1	1	0	1	1	1	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	5 (1.56%)	0	1	0	2	1	1	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	5 (1.56%)	0	1	0	0	1	2	0	1
29.5.7	protein.degradation.metalloprotease	5 (1.56%)	0	1	1	1	1	0	0	1
10.6	cell wall.degradation	4 (1.25%)	0	0	0	0	3	1	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	4 (1.25%)	0	0	0	0	3	1	0	0
15	metal handling	4 (1.25%)	0	0	0	2	1	1	0	0
17.5	hormone metabolism.ethylene	4 (1.25%)	0	0	1	2	1	0	0	0
23	nucleotide metabolism	4 (1.25%)	1	1	0	0	0	1	1	0
23.3	nucleotide metabolism.salvage	4 (1.25%)	1	1	0	0	0	1	1	0
23.3.1	nucleotide metabolism.salvage.phosphoribosyltransferases	4 (1.25%)	1	1	0	0	0	1	1	0
23.3.1.1	nucleotide metabolism.salvage.phosphoribosyltransferases.aprt	4 (1.25%)	1	1	0	0	0	1	1	0
26.28	misc.GDSL-motif lipase	4 (1.25%)	0	0	0	2	1	1	0	0
27.3.2	RNA.regulation of transcription.Alfin-like	4 (1.25%)	0	0	0	0	2	0	0	2
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	4 (1.25%)	0	2	0	0	1	0	0	1
28	DNA	4 (1.25%)	0	0	0	0	2	2	0	0
30.4	signalling.phosphinositides	4 (1.25%)	0	0	0	0	1	1	1	1
30.4.2	signalling.phosphinositides.phosphatidylinositol 4-kinase	4 (1.25%)	0	0	0	0	1	1	1	1
31.4	cell.vesicle transport	4 (1.25%)	0	0	0	0	2	1	1	0
13	amino acid metabolism	3 (0.94%)	0	1	0	0	0	2	0	0
13.2	amino acid metabolism.degradation	3 (0.94%)	0	1	0	0	0	2	0	0
17.2	hormone metabolism.auxin	3 (0.94%)	0	0	0	0	3	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	3 (0.94%)	0	2	0	1	0	0	0	0
27.3.65	RNA.regulation of transcription.Polycomb Group (PcG)	3 (0.94%)	0	1	0	2	0	0	0	0
28.1	DNA.synthesis/chromatin structure	3 (0.94%)	0	0	0	0	1	2	0	0
29.2	protein.synthesis	3 (0.94%)	0	0	0	0	2	1	0	0
29.2.4	protein.synthesis.elongation	3 (0.94%)	0	0	0	0	2	1	0	0
29.3	protein.targeting	3 (0.94%)	0	1	0	0	1	1	0	0
29.3.4	protein.targeting.secretory pathway	3 (0.94%)	0	1	0	0	1	1	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	3 (0.94%)	0	1	0	0	1	1	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	3 (0.94%)	0	0	1	0	2	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	3 (0.94%)	0	0	0	0	3	0	0	0
34.12	transport.metal	3 (0.94%)	0	0	0	1	1	0	0	1
1	PS	2 (0.63%)	0	0	1	0	1	0	0	0
1.1	PS.lightreaction	2 (0.63%)	0	0	1	0	1	0	0	0
2	major CHO metabolism	2 (0.63%)	1	0	0	1	0	0	0	0
8	TCA / org transformation	2 (0.63%)	0	0	0	2	0	0	0	0
13.2.6	amino acid metabolism.degradation.aromatic aa	2 (0.63%)	0	0	0	0	0	2	0	0
13.2.6.3	amino acid metabolism.degradation.aromatic aa.tryptophan	2 (0.63%)	0	0	0	0	0	2	0	0
17.2.2	hormone metabolism.auxin.signal transduction	2 (0.63%)	0	0	0	0	2	0	0	0
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	2 (0.63%)	0	0	0	1	1	0	0	0
2.2	major CHO metabolism.degradation	2 (0.63%)	1	0	0	1	0	0	0	0
2.2.1	major CHO metabolism.degradation.sucrose	2 (0.63%)	1	0	0	1	0	0	0	0
2.2.1.3	major CHO metabolism.degradation.sucrose.invertases	2 (0.63%)	1	0	0	1	0	0	0	0
2.2.1.3.1	major CHO metabolism.degradation.sucrose.invertases.neutral	2 (0.63%)	1	0	0	1	0	0	0	0
20.2.1	stress.abiotic.heat	2 (0.63%)	0	1	0	0	0	1	0	0
20.2.3	stress.abiotic.drought/salt	2 (0.63%)	1	0	0	1	0	0	0	0
21	redox	2 (0.63%)	0	2	0	0	0	0	0	0
21.4	redox.glutaredoxins	2 (0.63%)	0	2	0	0	0	0	0	0
27.2	RNA.transcription	2 (0.63%)	0	0	0	1	1	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	2 (0.63%)	0	0	0	2	0	0	0	0
27.3.40	RNA.regulation of transcription.Aux/IAA family	2 (0.63%)	0	0	0	1	0	0	0	1
27.3.67	RNA.regulation of transcription.putative transcription regulator	2 (0.63%)	0	0	0	0	1	1	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	2 (0.63%)	0	0	0	1	1	0	0	0
27.3.71	RNA.regulation of transcription.SNF7	2 (0.63%)	0	0	0	2	0	0	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	2 (0.63%)	0	0	0	0	1	1	0	0
3.1	minor CHO metabolism.raffinose family	2 (0.63%)	0	0	0	0	1	1	0	0
3.1.2	minor CHO metabolism.raffinose family.raffinose synthases	2 (0.63%)	0	0	0	0	1	1	0	0
3.1.2.2	minor CHO metabolism.raffinose family.raffinose synthases.putative	2 (0.63%)	0	0	0	0	1	1	0	0
8.3	TCA / org transformation.carbonic anhydrases	2 (0.63%)	0	0	0	2	0	0	0	0
30.10	signalling.phosphorelay	2 (0.63%)	1	0	0	0	0	0	1	0
30.11	signalling.light	2 (0.63%)	0	1	0	0	0	0	0	1
1.1.1	PS.lightreaction.photosystem II	1 (0.31%)	0	0	1	0	0	0	0	0
1.1.1.2	PS.lightreaction.photosystem II.PSII polypeptide subunits	1 (0.31%)	0	0	1	0	0	0	0	0
1.1.5	PS.lightreaction.other electron carrier (ox/red)	1 (0.31%)	0	0	0	0	1	0	0	0
1.1.5.3	PS.lightreaction.other electron carrier (ox/red).ferredoxin reductase	1 (0.31%)	0	0	0	0	1	0	0	0
9	mitochondrial electron transport / ATP synthesis	1 (0.31%)	0	0	0	0	1	0	0	0
10.5	cell wall.cell wall proteins	1 (0.31%)	0	0	0	1	0	0	0	0
10.5.1	cell wall.cell wall proteins.AGPs	1 (0.31%)	0	0	0	1	0	0	0	0
10.5.1.1	cell wall.cell wall proteins.AGPs.AGP	1 (0.31%)	0	0	0	1	0	0	0	0
10.8	cell wall.pectin*esterases	1 (0.31%)	0	0	0	1	0	0	0	0
10.8.1	cell wall.pectin*esterases.PME	1 (0.31%)	0	0	0	1	0	0	0	0
11	lipid metabolism	1 (0.31%)	0	1	0	0	0	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.31%)	0	1	0	0	0	0	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.31%)	0	1	0	0	0	0	0	0
11.9.3.1	lipid metabolism.lipid degradation.lysophospholipases.phospholipase D	1 (0.31%)	0	1	0	0	0	0	0	0
13.2.3	amino acid metabolism.degradation.aspartate family	1 (0.31%)	0	1	0	0	0	0	0	0
13.2.3.5	amino acid metabolism.degradation.aspartate family.lysine	1 (0.31%)	0	1	0	0	0	0	0	0
15.2	metal handling.binding, chelation and storage	1 (0.31%)	0	0	0	0	1	0	0	0
17.1.1.1.10	hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase	1 (0.31%)	0	1	0	0	0	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	1 (0.31%)	0	0	0	0	1	0	0	0
17.4	hormone metabolism.cytokinin	1 (0.31%)	0	0	0	0	0	0	0	1
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.31%)	0	0	0	0	0	0	0	1
17.5.1	hormone metabolism.ethylene.synthesis-degradation	1 (0.31%)	0	0	1	0	0	0	0	0
17.5.2	hormone metabolism.ethylene.signal transduction	1 (0.31%)	0	0	0	1	0	0	0	0
20.2.99	stress.abiotic.unspecified	1 (0.31%)	0	0	0	0	1	0	0	0
26.13	misc.acid and other phosphatases	1 (0.31%)	0	0	0	0	0	0	0	1
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (0.31%)	0	0	0	0	0	1	0	0
26.7	misc.oxidases - copper, flavone etc	1 (0.31%)	0	0	0	0	0	1	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.31%)	0	1	0	0	0	0	0	0
27.1	RNA.processing	1 (0.31%)	0	0	0	0	0	0	0	1
27.1.19	RNA.processing.ribonucleases	1 (0.31%)	0	0	0	0	0	0	0	1
27.3.17	RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family	1 (0.31%)	0	0	0	0	0	0	0	1
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.31%)	0	0	0	1	0	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	1 (0.31%)	0	0	0	0	1	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.31%)	0	0	0	0	1	0	0	0
27.3.27	RNA.regulation of transcription.NAC domain transcription factor family	1 (0.31%)	1	0	0	0	0	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	1 (0.31%)	0	0	0	0	1	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (0.31%)	0	0	0	0	0	1	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	1 (0.31%)	0	0	0	0	0	0	0	1
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.31%)	0	0	0	0	1	0	0	0
27.3.42	RNA.regulation of transcription.Bromodomain proteins	1 (0.31%)	0	0	0	1	0	0	0	0
27.3.51	RNA.regulation of transcription.General Transcription, TBP-binding protein	1 (0.31%)	0	0	0	0	0	1	0	0
27.3.55	RNA.regulation of transcription.HDA	1 (0.31%)	0	0	0	0	1	0	0	0
27.3.57	RNA.regulation of transcription.JUMONJI family	1 (0.31%)	0	0	0	1	0	0	0	0
27.4	RNA.RNA binding	1 (0.31%)	0	0	0	0	1	0	0	0
28.2	DNA.repair	1 (0.31%)	0	0	0	0	1	0	0	0
29.1	protein.aa activation	1 (0.31%)	0	0	0	0	1	0	0	0
29.1.30	protein.aa activation.pseudouridylate synthase	1 (0.31%)	0	0	0	0	1	0	0	0
29.2.1.1.1.1.4	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S4	1 (0.31%)	0	0	0	0	1	0	0	0
29.2.1.2.2.527	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A	1 (0.31%)	0	0	0	1	0	0	0	0
29.2.1.2.2.8	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L8	1 (0.31%)	0	1	0	0	0	0	0	0
29.5.11.4.5.2	protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ	1 (0.31%)	0	0	0	0	1	0	0	0
3.4	minor CHO metabolism.myo-inositol	1 (0.31%)	0	1	0	0	0	0	0	0
3.4.3	minor CHO metabolism.myo-inositol.InsP Synthases	1 (0.31%)	0	1	0	0	0	0	0	0
3.5	minor CHO metabolism.others	1 (0.31%)	0	0	0	1	0	0	0	0
9.9	mitochondrial electron transport / ATP synthesis.F1-ATPase	1 (0.31%)	0	0	0	0	1	0	0	0
30.1	signalling.in sugar and nutrient physiology	1 (0.31%)	0	1	0	0	0	0	0	0
30.2.99	signalling.receptor kinases.misc	1 (0.31%)	0	0	0	0	1	0	0	0
31.2	cell.division	1 (0.31%)	0	0	0	1	0	0	0	0
31.3	cell.cycle	1 (0.31%)	0	1	0	0	0	0	0	0
34.21	transport.calcium	1 (0.31%)	0	0	0	0	1	0	0	0
34.3	transport.amino acids	1 (0.31%)	0	0	0	0	0	0	0	1
34.99	transport.misc	1 (0.31%)	0	0	0	1	0	0	0	0