PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_44
Name: CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_41	anac058	Not Available	84.87%
Matrix_206	CUC1; ANAC100	Not Available	83.04%
Matrix_322	NST3; ANAC015; BRN2	Not Available	78.09%
Matrix_14	ZCW32; AT5G62610	Not Available	76.53%
Matrix_516	ANAC038; ANAC079	Not Available	69.76%
Matrix_475	AT5G64220	Not Available	69.37%
Matrix_460	NAM; anac025; ATNAC2	Not Available	68.52%
Matrix_374	AT5G07580; AT5G61590	Not Available	68.52%
Matrix_469	NAC041; NAC083	Not Available	68.07%
Matrix_273	ANAC55	Not Available	67.36%
Matrix_243	RAP2.12; RAP2.2	Not Available	67.00%
Matrix_142	ZFP8	Not Available	66.90%
Matrix_151	ASIL1	Not Available	66.83%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	66.45%
Matrix_300	bZIP68; bZIP16	Not Available	66.40%
Matrix_188	SPL4	Not Available	65.96%
Matrix_20	ANAC030; NST1; NAC066	Not Available	65.67%
Matrix_423	AT3G04030	Not Available	65.64%
Matrix_80	BIM1	Not Available	65.25%
Matrix_78	AT3G45610	Not Available	65.25%
Matrix_296	GBF2	Not Available	65.09%
Matrix_321	HRD	Not Available	64.99%
Matrix_493	AT1G22985; AT1G71130	Not Available	64.80%
Matrix_259	AT1G50680; AT1G51120	Not Available	64.76%
Matrix_418	KNAT6; KNAT2	Not Available	64.14%
Matrix_91	CRF3	Not Available	64.05%
Matrix_46	AT4G21895	Not Available	64.04%
Matrix_99	DOF4.7	Not Available	63.86%
Matrix_307	RGL2; RGL3	Not Available	63.86%
Matrix_120	BEE2	Not Available	63.64%
Matrix_182	ATHB6	Not Available	63.57%
Matrix_171	LBD3; LBD4	Not Available	63.54%
Matrix_261	ATERF-1	Not Available	63.35%
Matrix_233	MYC3	Not Available	63.07%
Matrix_313	ATMYB65; MYB33	Not Available	62.83%
Matrix_137	SPL1; SPL12	Not Available	62.70%
Matrix_512	HAT3	Not Available	62.70%
Matrix_27	ATAIB; ATNIG1	Not Available	62.63%
Matrix_84	AtGRF6	Not Available	62.34%
Matrix_152	EIL1; AT5G65100	Not Available	62.16%
Matrix_389	ILR3	Not Available	62.09%
Matrix_282	bZIP60	Not Available	62.07%
Matrix_255	cdf3	Not Available	62.05%
Matrix_38	SPL14	Not Available	61.85%
Matrix_323	BIM3	Not Available	61.77%
Matrix_59	AT4G00238; AT4G00250	Not Available	61.57%
Matrix_129	ABF1	Not Available	61.56%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	61.47%
Matrix_109	GBF3	Not Available	61.44%
Matrix_287	ERF2	Not Available	61.38%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	61.29%
Matrix_465	MYC4	Not Available	61.27%
Matrix_248	ZFP5	Not Available	61.20%
Matrix_101	ERF5	Not Available	61.20%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	60.91%
Matrix_35	YAB5; YAB3	Not Available	60.85%
Matrix_437	MYC2	Not Available	60.85%
Matrix_449	BIM2	Not Available	60.61%
Matrix_341	HMGA	Not Available	60.60%
Matrix_334	AT3G23230	Not Available	60.60%
Matrix_221	SPL7	Not Available	60.59%
Matrix_331	GBF1	Not Available	60.49%
Matrix_330	MYC2; TT8	Not Available	60.42%
Matrix_12	EIN3; EIL2	Not Available	60.25%
Matrix_415	WRKY27	Not Available	60.06%
Matrix_463	HAT3.1	Not Available	60.03%
Matrix_286	GATA7	Not Available	59.94%
Matrix_37	GATA27	Not Available	59.92%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	59.82%
Matrix_227	AT1G64620	Not Available	59.75%
Matrix_114	EPR1; AT3G10113	Not Available	59.57%
Matrix_274	EDF3	Not Available	59.49%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	59.42%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	59.24%
Matrix_228	TGA2	Not Available	59.16%
Matrix_177	ADOF2	Not Available	59.14%
Matrix_308	INO	Not Available	59.11%
Matrix_65	POC1; PIL1	Not Available	58.89%
Matrix_141	AT3G25990	Not Available	58.79%
Matrix_239	AT5G04390	Not Available	58.75%
Matrix_241	HB-1; AT5G44180	Not Available	58.67%
Matrix_17	WRKY22	Not Available	58.64%
Matrix_320	MYC4	Not Available	58.62%
Matrix_380	ATMYR1	Not Available	58.36%
Matrix_126	RBE	Not Available	58.09%
Matrix_416	ASL5	Not Available	58.06%
Matrix_75	WRKY29	Not Available	57.64%
Matrix_379	RHL41	Not Available	57.61%
Matrix_491	AT1G68670; AT3G25790	Not Available	57.54%
Matrix_511	AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180	Not Available	57.52%
Matrix_347	WOX14; WOX10	Not Available	57.51%
Matrix_371	MYB7; AtMYB6; AtMYB32; ATMYB4	Not Available	57.49%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	57.33%
Matrix_425	TIFY2A	Not Available	57.25%
Matrix_333	GATA3	Not Available	57.17%
Motif_158	ZDNAFORMINGATCAB1	Z-DNA-forming sequence found in the Arabidopsis chlorophyll a/b binding protein gene (cab1) promoter; Involved in light-dependent developmental expression of the gene; Z-box; Activation of Z-box containing promoters is regulated by downstream regulatory components, COP1 and HY5; phyB and CRY1 photoreceptors act redundantly to induce Z-box containing promoters in white light; Identification of upstream regulatory elements involved in the developmental expression of the Arabidopsis thaliana cab1 gene	57.15%
Matrix_365	AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1	Not Available	57.06%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	57.05%
Matrix_226	GATA1	Not Available	57.04%
Matrix_355	ERF10; ERF11	Not Available	56.95%
Matrix_165	KNAT1	Not Available	56.89%
Matrix_150	UNE10; PIF7	Not Available	56.82%
Matrix_60	AT1G01260; AT5G57150	Not Available	56.66%
Matrix_198	STZ; C2H2; AZF3	Not Available	56.33%
Matrix_64	PIF5	Not Available	56.28%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	56.17%
Matrix_328	AT1G76580	Not Available	56.17%
Matrix_503	AT2G37430; AT3G53600	Not Available	56.13%
Matrix_489	RAV1	Not Available	56.03%
Matrix_57	WIN1; SHN3; SHN2	Not Available	56.01%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	56.00%
Matrix_69	AT2G03500	Not Available	55.96%
Motif_51	MYB46	Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis	55.88%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	55.87%
Matrix_197	NAP	Not Available	55.83%
Matrix_156	POC1	Not Available	55.77%
Matrix_436	AT3G49930; AZF1	Not Available	55.69%
Matrix_93	YAB5	Not Available	55.63%
Matrix_337	MYB46	Not Available	55.59%
Matrix_204	WOX13	Not Available	55.57%
Matrix_85	SPL5	Not Available	55.56%
Matrix_476	bHLH115; bHLH34	Not Available	55.55%
Matrix_424	MYB59	Not Available	55.49%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	55.40%
Matrix_411	DOF5.6	Not Available	55.37%
Matrix_112	TBP2; TFIID-1	Not Available	55.35%
Matrix_145	GBF4; AT5G44080	Not Available	55.30%
Matrix_505	GATA8	Not Available	55.18%
Matrix_336	AT5G08520	Not Available	55.07%
Matrix_332	SPT; ALC	Not Available	55.05%
Matrix_167	ZAT6	Not Available	55.00%
Matrix_100	AT1G48610	Not Available	54.97%
Matrix_212	ATHB-12	Not Available	54.93%
Matrix_122	ABF1; AREB2	Not Available	54.91%
Matrix_4	ARR14	Not Available	54.89%
Matrix_456	bZIP60	Not Available	54.88%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	54.81%
Matrix_519	ATDOF2.4	Not Available	54.74%
Matrix_97	APRR2	Not Available	54.70%
Matrix_70	GATA26	Not Available	54.65%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	54.56%
Matrix_210	ARR1	Not Available	54.48%
Matrix_3	WRKY48	Not Available	54.47%
Matrix_420	ANAC58	Not Available	54.44%
Matrix_162	AtPHR1	Not Available	54.42%
Matrix_16	AT3G04450; PHL1	Not Available	54.37%
Matrix_87	AT1G19000	Not Available	54.33%
Matrix_195	GATA2; GATA4	Not Available	54.11%
Matrix_431	ATHB21; HB-3	Not Available	53.98%
Matrix_143	GATA14; GATA6; GATA5	Not Available	53.96%
Matrix_346	AtMYB70; MYB73	Not Available	53.82%
Matrix_7	PIF4	Not Available	53.80%
Motif_440	TGA1 binding site motif	Hex motif; Binding site of Arabidopsis bZIP protein TGA1 and G box binding factor GBF1; TGA1 and members of the GBF family differ in their DNA binding properties; G-Box-like element;TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG	53.76%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	53.69%
Matrix_72	CDF2	Not Available	53.68%
Matrix_370	WRKY50; WRKY51	Not Available	53.66%
Matrix_408	GATA12	Not Available	53.61%
Matrix_373	E2FE	Not Available	53.56%
Matrix_303	ATWOX13	Not Available	53.51%
Matrix_430	TOE2	Not Available	53.50%
Matrix_225	MYB52	Not Available	53.48%
Matrix_398	TBP2; ATTRB2	Not Available	53.46%
Matrix_501	DAG2	Not Available	53.38%
Matrix_474	ANAC014; ANAC062; NTL9; TIP	Not Available	53.36%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	53.30%
Matrix_404	OBP4	Not Available	53.28%
Matrix_111	ABF3	Not Available	53.23%
Matrix_116	ANAC55	Not Available	53.18%
Matrix_315	MYB111	Not Available	53.16%
Matrix_53	MYC3	Not Available	53.08%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	52.87%
Matrix_361	AT1G25550	Not Available	52.85%
Matrix_260	CAMTA3	Not Available	52.82%
Matrix_324	AT2G01060	Not Available	52.67%
Matrix_50	ATERF14; AT5G43410	Not Available	52.65%
Matrix_409	DEAR3	Not Available	52.56%
Matrix_343	AT2G33710	Not Available	52.43%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	52.16%
Motif_41	ARR2	Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators	52.08%
Matrix_513	SOL1; TSO1; TCX2	Not Available	52.06%
Matrix_8	KAN1	Not Available	52.03%
Matrix_90	BEE1; BEE3; AT3G07340; AT5G48560; AT5G50915	Not Available	52.03%
Matrix_63	ARR10	Not Available	52.00%
Matrix_23	ANAC46	Not Available	51.96%
Motif_250	ACGTOSGLUB1	ACGT motif found in GluB-1 gene in rice; Required for endosperm-specific expression; Conserved in the 5'-flanking region of glutelin genes; Combination of GCN4, AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression	51.95%
Motif_17	AUXRETGA1GMGH3	TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts	51.93%
Matrix_472	ZN_C2_H2	Not Available	51.83%
Motif_116	INRNTPSADB	Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box	51.77%
Matrix_490	AtMYB77; ATMYB44	Not Available	51.73%
Matrix_344	ATERF15; AT4G18450	Not Available	51.68%
Matrix_384	ATWRKY17	Not Available	51.67%
Matrix_354	AHL12	Not Available	51.48%
Matrix_461	ATHB12	Not Available	51.43%
Matrix_311	TGA1	Not Available	51.39%
Matrix_193	RAV1	Not Available	51.33%
Matrix_265	NGA3	Not Available	51.33%
Motif_598	SORLIP3AT	one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; See also all SORLIPs and also all SORLREPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	51.09%
Matrix_21	HSFC1	Not Available	51.08%
Matrix_433	ATERF1	Not Available	51.07%
Matrix_518	AT2G21230	Not Available	51.06%
Matrix_455	MYB111	Not Available	51.01%
Matrix_504	WRKY40	Not Available	50.98%
Matrix_401	MYB55	Not Available	50.86%
Matrix_40	TCP2	Not Available	50.74%
Matrix_181	Dof5.7	Not Available	50.69%
Matrix_249	WRKY11	Not Available	50.66%
Matrix_61	ATCBF3	Not Available	50.56%
Motif_685	PALINDROMICCBOXGM	Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence	50.52%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	50.51%
Matrix_271	AT3G16350	Not Available	50.50%
Matrix_230	ARR11	Not Available	50.49%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	50.43%
Matrix_279	HRS1	Not Available	50.29%
Matrix_169	E2F1	Not Available	50.27%
Motif_487	ACIIIPVPAL2	ACIII element found at -246 to -238 of bean PAL2 promoter; ACIII element is required for vascular-specific gene expression; See also ACIPVPAL2 and ACIIPVPAL2; Three AC-elements, which are possible Myb protein binding sites, together with a G-box, interact to direct the complex patterns of tissu-specific expression of pAL2 gene	50.27%
Matrix_247	PIF3	Not Available	50.13%
Matrix_209	RAP2.6	Not Available	50.09%