Matrix_184 | AGL15 | Not Available | | 81.84% |
Matrix_412 | GL1 | Not Available | | 79.35% |
Matrix_74 | LFY | Not Available | | 77.83% |
Matrix_497 | AP3 | Not Available | | 74.98% |
Matrix_132 | SOC1 | Not Available | | 66.02% |
Matrix_208 | AP1 | Not Available | | 65.30% |
Matrix_89 | SOC1 | Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 63.64% |
Matrix_25 | AP3 | Not Available | | 63.16% |
Matrix_136 | SEP3 | Not Available | | 61.29% |
Matrix_290 | AP2 | Not Available | | 61.21% |
Matrix_36 | RAV1_1 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 60.53% |
Motif_692 | MYB80 | The MYB80 transcription factor is required for pollen development and the regulation of tapetal programmed cell death in Arabidopsis thaliana | | 60.11% |
Matrix_72 | CDF2 | Not Available | | 60.09% |
Motif_44 | AGL25 | FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis | | 59.94% |
Matrix_181 | Dof5.7 | Not Available | | 59.75% |
Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 59.39% |
Motif_416 | MYB80 | The MYB80 transcription factor is required for pollen development and the regulation of tapetal programmed cell death in Arabidopsis thaliana | | 59.28% |
Matrix_312 | ARF11; MP; ARF6; IAA21; ARF8; ARF4 | Not Available | | 59.05% |
Motif_578 | BBOXSITE1STPAT | 10 base pair motif (site 1) within the B-box found in the potato patatin gene promoter; Involved in potato tuber-specific and sucrose-inducible gene expression; Storekeeper (STK) binds to this region and regulates patatin expression in potato | | 59.03% |
Matrix_172 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 59.00% |
Matrix_51 | LFY | Not Available | | 58.59% |
Matrix_66 | AtLEC2 | Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis | | 58.48% |
Matrix_227 | AT1G64620 | Not Available | | 58.31% |
Matrix_161 | MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570 | Not Available | | 58.25% |
Matrix_420 | ANAC58 | Not Available | | 58.20% |
Matrix_210 | ARR1 | Not Available | | 58.13% |
Matrix_523 | FUSCA3 | Not Available | | 57.98% |
Motif_660 | GT-3b | Pathogen- and NaCl-induced expression of the SCaM-4 promoter is mediated in part by a GT-1 box that interacts with a GT-1-like transcription factor | | 57.78% |
Matrix_4 | ARR14 | Not Available | | 57.71% |
Matrix_357 | WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72 | Not Available | | 57.60% |
Matrix_291 | EDF3 | Not Available | | 57.54% |
Matrix_205 | AGL15 | Not Available | | 57.48% |
Matrix_254 | MYB52 | Not Available | | 57.45% |
Matrix_159 | TEM2 | Not Available | | 57.20% |
Matrix_97 | APRR2 | Not Available | | 57.10% |
Matrix_393 | REM1 | Not Available | | 57.02% |
Matrix_319 | TEM1 | Not Available | | 57.01% |
Motif_333 | GLUTEBP1OS | Glutelin BP-1; Binding site in the promoter region of glutelin Gt3 gene family of nuclear factor (PB-1); PB-1 is observed only in nuclear extract of developing seeds | | 56.90% |
Matrix_383 | CCA1 | Not Available | | 56.83% |
Matrix_160 | RVE1 | Not Available | | 56.76% |
Matrix_494 | OBP4 | Not Available | | 56.72% |
Matrix_440 | LFY | Not Available | | 56.72% |
Matrix_26 | ATMYB3; MYB24 | Not Available | | 56.49% |
Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 55.95% |
Matrix_186 | FHY3 | Not Available | | 55.93% |
Matrix_369 | AT2G18300 | Not Available | | 55.89% |
Matrix_396 | AP3 | Not Available | | 55.82% |
Matrix_258 | WOX13 | Not Available | | 55.81% |
Matrix_447 | RVE1 | Not Available | | 55.79% |
Matrix_352 | LEC2 | Not Available | | 55.72% |
Motif_153 | MARABOX1 | A-box found in SAR(scaffold attachment region; or matrix attachment region, MAR) | | 55.61% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 55.53% |
Matrix_452 | MYB46 | Not Available | | 55.40% |
Matrix_255 | cdf3 | Not Available | | 55.09% |
Matrix_324 | AT2G01060 | Not Available | | 55.08% |
Motif_83 | CIACADIANLELHC | Region necessary for circadian expression of tomato Lhc gene | | 55.07% |
Matrix_341 | HMGA | Not Available | | 54.94% |
Matrix_168 | AHL25 | Not Available | | 54.41% |
Matrix_463 | HAT3.1 | Not Available | | 54.39% |
Motif_25 | GLUTAACAOS | glutelin common motif; AACA motif; Conserved in all member of rice glutelin | | 54.39% |
Matrix_249 | WRKY11 | Not Available | | 54.38% |
Matrix_157 | LHY; RVE2 | Not Available | | 54.36% |
Motif_184 | PROXBBNNAPA | prox B (proximal portion of B-box) found in napA gene of Brassica napus; CA-rich sequence; Found between -130 and -124; Required for seed specific expression and ABA responsiveness; dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE | | 54.23% |
Matrix_92 | AT1G33760 | Not Available | | 54.18% |
Matrix_213 | ATHB22 | Not Available | | 54.13% |
Matrix_114 | EPR1; AT3G10113 | Not Available | | 54.09% |
Matrix_175 | Dof5.7 | Not Available | | 54.07% |
Matrix_69 | AT2G03500 | Not Available | | 54.06% |
Matrix_385 | DEAR4 | Not Available | | 54.06% |
Matrix_54 | AHL20 | Not Available | | 54.04% |
Motif_188 | CDA1ATCAB2 | CDA-1 (CAB2 DET1-associated factor 1) binding site in DtRE (dark response element) f of chlorophyll a/b-binding protein2 (CAB2) gene in Arabidopsis | | 54.02% |
Matrix_286 | GATA7 | Not Available | | 54.00% |
Matrix_361 | AT1G25550 | Not Available | | 53.92% |
Matrix_16 | AT3G04450; PHL1 | Not Available | | 53.86% |
Motif_423 | MYB2 | Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) by low oxygen | | 53.82% |
Matrix_495 | HD-GL2-1; ANL2 | Not Available | | 53.78% |
Matrix_167 | ZAT6 | Not Available | | 53.76% |
Matrix_434 | ARR11 | Not Available | | 53.70% |
Matrix_99 | DOF4.7 | Not Available | | 53.61% |
Motif_420 | SORLREP2AT | one of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; See also all SORLREPs and all SORLIPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data | | 53.61% |
Matrix_309 | FLC | Not Available | | 53.45% |
Matrix_195 | GATA2; GATA4 | Not Available | | 53.36% |
Matrix_262 | ATGRP2B; CSDP2 | Not Available | | 53.28% |
Matrix_226 | GATA1 | Not Available | | 53.25% |
Matrix_311 | TGA1 | Not Available | | 53.22% |
Matrix_501 | DAG2 | Not Available | | 53.19% |
Matrix_328 | AT1G76580 | Not Available | | 53.11% |
Matrix_22 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 53.11% |
Matrix_128 | TGA2 | Not Available | | 52.96% |
Matrix_382 | AT3G04850 | Not Available | | 52.93% |
Matrix_162 | AtPHR1 | Not Available | | 52.91% |
Matrix_88 | AHL12 | Not Available | | 52.90% |
Motif_356 | S2FSORPL21 | S2F binding site (S2 site) in spinach RPL21 gene encoding the plastid ribosomal protein L21; S2 site (CATACAWW) is conserved in promoter region of many nuclear genes encoding plastid proteins; Leaf-specific, light-independent regulatory element; S2 site is related to but different from the light-responsive GT-1 binding site | | 52.82% |
Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 52.80% |
Matrix_284 | KAN2; KAN3; KAN; KAN4 | Not Available | | 52.67% |
Matrix_408 | GATA12 | Not Available | | 52.65% |
Matrix_502 | AT3G13040 | Not Available | | 52.57% |
Matrix_154 | AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130 | Not Available | | 52.51% |
Matrix_116 | ANAC55 | Not Available | | 52.49% |
Matrix_456 | bZIP60 | Not Available | | 52.43% |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 52.42% |
Motif_476 | XYLAT | cis-element identified among the promoters of the core xylem gene set | | 52.31% |
Matrix_193 | RAV1 | Not Available | | 52.27% |
Matrix_265 | NGA3 | Not Available | | 52.27% |
Matrix_271 | AT3G16350 | Not Available | | 52.24% |
Matrix_32 | AHL25 | Not Available | | 52.18% |
Matrix_141 | AT3G25990 | Not Available | | 52.14% |
Matrix_13 | HAT5 | Not Available | | 52.12% |
Motif_519 | MYB80 | The MYB80 transcription factor is required for pollen development and the regulation of tapetal programmed cell death in Arabidopsis thaliana | | 52.09% |
Matrix_81 | YAB1 | Not Available | | 52.03% |
Matrix_212 | ATHB-12 | Not Available | | 52.02% |
Motif_265 | GCAACREPEATZMZEIN | GCAAC repeat found in the 22bp recognition site for beta-1 factor in the promoter of beta-zein (prolamin type) gene of maize; GCAAC is the core recognition sequence of the protein encoded by the retroviral oncogene myb | | 52.01% |
Matrix_411 | DOF5.6 | Not Available | | 51.94% |
Matrix_353 | HAT5 | Not Available | | 51.94% |
Matrix_55 | PIF3 | Not Available | | 51.86% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 51.82% |
Motif_649 | 2SSEEDPROTBANAPA | Conserved in many storage-protein gene promoters; May be important for high activity of the napA promoter | | 51.78% |
Matrix_432 | AT1G77920 | Not Available | | 51.71% |
Matrix_404 | OBP4 | Not Available | | 51.71% |
Motif_296 | MYB98 | MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins | | 51.69% |
Matrix_444 | AT1G19485; AT4G17950 | Not Available | | 51.62% |
Motif_449 | AGL25; SVP | FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis. Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 51.61% |
Matrix_185 | AHL25 | Not Available | | 51.58% |
Matrix_229 | CDC5 | A cdc5+ homolog of a higher plant, Arabidopsis thaliana | | 51.57% |
Matrix_500 | WRKY43 | Not Available | | 51.56% |
Matrix_12 | EIN3; EIL2 | Not Available | | 51.48% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 51.48% |
Matrix_308 | INO | Not Available | | 51.47% |
Matrix_419 | TGA9; PAN; TGA6; bZIP65 | Not Available | | 51.44% |
Motif_588 | TL1ATSAR | TL1, a consensus sequence overrepresented in the promoter regions of all 13 NPR1-responsive ER-resident genes surveyed; NPR1 is Nonexpressor of pathogenesis-related genes 1, also known as NIM1 | | 51.43% |
Matrix_246 | ARR10 | Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators | | 51.43% |
Matrix_314 | WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52 | Not Available | | 51.41% |
Matrix_93 | YAB5 | Not Available | | 51.36% |
Matrix_394 | DREB_U | Not Available | | 51.27% |
Matrix_142 | ZFP8 | Not Available | | 51.26% |
Matrix_148 | WRKY60 | Not Available | | 51.23% |
Matrix_125 | AHL12 | Not Available | | 51.19% |
Matrix_236 | CCA1 | Not Available | | 51.09% |
Matrix_237 | MYB55 | Not Available | | 51.00% |
Matrix_46 | AT4G21895 | Not Available | | 50.98% |
Matrix_244 | DREB2C | Not Available | | 50.98% |
Motif_93 | RGATAOS | R-GATA (GATA motif binding factor) binding site; GATA motif is found at -143 to -135 of RTBV promoter; GATA motif is required for phloem-specific gene expression of Rice Tungro Bacilliform Virus (RTBV); See also RNFG1OS, RNFG2OS, and ABFOS | | 50.91% |
Motif_12 | CEREGLUBOX2PSLEGA | cereal glutenin box in pea legumin gene (legA); sequence homologous to the cereal glutenin gene control element (-300 element) | | 50.90% |
Matrix_280 | TCP24; TCP1; BRC2; ATTCP18 | Not Available | | 50.84% |
Matrix_23 | ANAC46 | Not Available | | 50.81% |
Matrix_336 | AT5G08520 | Not Available | | 50.77% |
Motif_331 | AtWER | Regulation of CAPRICE transcription by MYB proteins for root epidermis differentiation in Arabidopsis | | 50.75% |
Matrix_421 | GLK1 | Not Available | | 50.69% |
Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 50.66% |
Matrix_327 | ARR11 | Not Available | | 50.62% |
Matrix_354 | AHL12 | Not Available | | 50.60% |
Matrix_397 | GT2L | Not Available | | 50.58% |
Matrix_67 | GLK1 | Not Available | | 50.58% |
Matrix_204 | WOX13 | Not Available | | 50.56% |
Matrix_296 | GBF2 | Not Available | | 50.55% |
Matrix_58 | WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30 | Not Available | | 50.42% |
Matrix_83 | PRR5 | Not Available | | 50.31% |
Matrix_333 | GATA3 | Not Available | | 50.26% |
Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | | 50.25% |
Matrix_17 | WRKY22 | Not Available | | 50.23% |
Matrix_70 | GATA26 | Not Available | | 50.21% |
Matrix_9 | AT5G04760 | Not Available | | 50.17% |
Motif_260 | MYB98 | MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins | | 50.06% |
Matrix_406 | ATERF-7 | Not Available | | 50.01% |