PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_373
Name: E2FE
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_171	LBD3; LBD4	Not Available	70.60%
Matrix_23	ANAC46	Not Available	67.83%
Matrix_277	RAP2.6	Not Available	67.72%
Matrix_169	E2F1	Not Available	67.72%
Matrix_59	AT4G00238; AT4G00250	Not Available	67.04%
Matrix_420	ANAC58	Not Available	66.94%
Matrix_389	ILR3	Not Available	66.76%
Matrix_151	ASIL1	Not Available	66.57%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	66.00%
Matrix_322	NST3; ANAC015; BRN2	Not Available	65.84%
Matrix_101	ERF5	Not Available	65.42%
Matrix_50	ATERF14; AT5G43410	Not Available	65.17%
Matrix_363	RAP2.3	Not Available	65.07%
Matrix_53	MYC3	Not Available	64.98%
Matrix_323	BIM3	Not Available	64.91%
Matrix_120	BEE2	Not Available	64.76%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	64.72%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	64.68%
Matrix_433	ATERF1	Not Available	64.55%
Matrix_330	MYC2; TT8	Not Available	64.39%
Matrix_465	MYC4	Not Available	64.13%
Matrix_449	BIM2	Not Available	64.10%
Matrix_287	ERF2	Not Available	64.07%
Matrix_355	ERF10; ERF11	Not Available	64.05%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	64.00%
Matrix_57	WIN1; SHN3; SHN2	Not Available	63.92%
Motif_522	E2Fa	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	63.79%
Matrix_343	AT2G33710	Not Available	63.73%
Matrix_328	AT1G76580	Not Available	63.70%
Matrix_475	AT5G64220	Not Available	63.28%
Motif_219	E2Fa	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	63.24%
Matrix_374	AT5G07580; AT5G61590	Not Available	62.97%
Matrix_409	DEAR3	Not Available	62.96%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	62.67%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	62.62%
Matrix_492	ETT	Not Available	62.42%
Matrix_224	ERF1	Not Available	62.14%
Matrix_234	RAP2.3	Not Available	62.08%
Matrix_61	ATCBF3	Not Available	61.98%
Matrix_321	HRD	Not Available	61.82%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	61.61%
Matrix_259	AT1G50680; AT1G51120	Not Available	61.53%
Matrix_141	AT3G25990	Not Available	61.15%
Matrix_195	GATA2; GATA4	Not Available	60.52%
Matrix_91	CRF3	Not Available	60.37%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	60.25%
Matrix_119	RRTF1	Not Available	60.15%
Matrix_20	ANAC030; NST1; NAC066	Not Available	60.06%
Matrix_226	GATA1	Not Available	59.99%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	59.93%
Matrix_493	AT1G22985; AT1G71130	Not Available	59.79%
Matrix_446	LBD16	Not Available	59.75%
Matrix_378	ATERF1	Not Available	59.61%
Matrix_448	ATERF6	Not Available	59.56%
Matrix_416	ASL5	Not Available	59.53%
Matrix_144	AT5G08330; AT5G23280	Not Available	59.49%
Matrix_334	AT3G23230	Not Available	59.13%
Matrix_253	ETT	Not Available	59.13%
Matrix_288	RAP2.3	Not Available	59.05%
Matrix_260	CAMTA3	Not Available	59.02%
Matrix_489	RAV1	Not Available	58.97%
Matrix_186	FHY3	Not Available	58.94%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	58.93%
Matrix_286	GATA7	Not Available	58.92%
Matrix_138	RRTF1	Not Available	58.75%
Matrix_408	GATA12	Not Available	58.70%
Matrix_40	TCP2	Not Available	58.54%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	58.53%
Matrix_473	RRTF1	Not Available	58.48%
Matrix_45	DRN	Not Available	58.30%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	58.29%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	58.20%
Matrix_66	AtLEC2	Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis	58.00%
Matrix_129	ABF1	Not Available	57.98%
Matrix_472	ZN_C2_H2	Not Available	57.93%
Matrix_92	AT1G33760	Not Available	57.92%
Matrix_273	ANAC55	Not Available	57.69%
Matrix_307	RGL2; RGL3	Not Available	57.65%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	57.55%
Matrix_116	ANAC55	Not Available	57.54%
Matrix_146	ORA47	Not Available	57.34%
Matrix_147	ERF3; AT1G80580	Not Available	57.20%
Matrix_22	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	57.15%
Matrix_14	ZCW32; AT5G62610	Not Available	57.13%
Matrix_17	WRKY22	Not Available	57.13%
Matrix_243	RAP2.12; RAP2.2	Not Available	57.05%
Matrix_261	ATERF-1	Not Available	56.96%
Matrix_481	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	56.82%
Matrix_507	TCP3	Not Available	56.66%
Matrix_162	AtPHR1	Not Available	56.61%
Matrix_484	ATERF13	Not Available	56.36%
Matrix_348	AT5G51910	Not Available	56.32%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	56.12%
Matrix_463	HAT3.1	Not Available	56.10%
Matrix_344	ATERF15; AT4G18450	Not Available	56.07%
Matrix_188	SPL4	Not Available	56.05%
Matrix_295	ERF1	Not Available	56.04%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	55.92%
Matrix_418	KNAT6; KNAT2	Not Available	55.91%
Matrix_109	GBF3	Not Available	55.87%
Matrix_491	AT1G68670; AT3G25790	Not Available	55.85%
Matrix_308	INO	Not Available	55.83%
Matrix_75	WRKY29	Not Available	55.79%
Matrix_38	SPL14	Not Available	55.78%
Matrix_187	CDC5	Not Available	55.74%
Matrix_229	CDC5	A cdc5+ homolog of a higher plant, Arabidopsis thaliana	55.74%
Matrix_349	CDC5	Not Available	55.74%
Matrix_313	ATMYB65; MYB33	Not Available	55.68%
Matrix_69	AT2G03500	Not Available	55.61%
Matrix_244	DREB2C	Not Available	55.60%
Matrix_167	ZAT6	Not Available	55.60%
Matrix_387	ORA47	Not Available	55.50%
Matrix_516	ANAC038; ANAC079	Not Available	55.39%
Matrix_190	ATERF1	Not Available	55.28%
Matrix_272	DEAR4	Not Available	55.10%
Matrix_398	TBP2; ATTRB2	Not Available	55.07%
Matrix_506	DRNL; ATERF-4	Not Available	55.03%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	54.97%
Matrix_456	bZIP60	Not Available	54.92%
Matrix_16	AT3G04450; PHL1	Not Available	54.90%
Matrix_86	CRF5; CRF6; CRF4	Not Available	54.80%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	54.79%
Matrix_331	GBF1	Not Available	54.76%
Matrix_135	ABI3	Not Available	54.73%
Matrix_332	SPT; ALC	Not Available	54.68%
Matrix_122	ABF1; AREB2	Not Available	54.58%
Matrix_271	AT3G16350	Not Available	54.58%
Matrix_252	RAP2.6	Not Available	54.44%
Matrix_517	ERF12	Not Available	54.41%
Matrix_406	ATERF-7	Not Available	54.32%
Matrix_3	WRKY48	Not Available	54.29%
Matrix_152	EIL1; AT5G65100	Not Available	54.21%
Matrix_37	GATA27	Not Available	54.09%
Matrix_232	TCP23	Not Available	53.93%
Matrix_426	CRF1; CRF2	Not Available	53.84%
Matrix_394	DREB_U	Not Available	53.77%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	53.76%
Matrix_84	AtGRF6	Not Available	53.75%
Matrix_70	GATA26	Not Available	53.73%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	53.72%
Motif_457	AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	53.65%
Matrix_296	GBF2	Not Available	53.61%
Matrix_275	ZAP1	Characterization of a zinc-dependent transcriptional activator from Arabidopsis	53.58%
Matrix_85	SPL5	Not Available	53.57%
Matrix_196	TCP20; AT5G41030	Not Available	53.55%
Matrix_423	AT3G04030	Not Available	53.53%
Matrix_221	SPL7	Not Available	53.37%
Matrix_370	WRKY50; WRKY51	Not Available	53.36%
Matrix_5	AT5G51190; ERF104	Not Available	53.23%
Matrix_223	MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1	Not Available	53.12%
Matrix_415	WRKY27	Not Available	53.11%
Matrix_333	GATA3	Not Available	53.11%
Matrix_438	AtbZIP63	Not Available	53.06%
Matrix_128	TGA2	Not Available	53.02%
Matrix_369	AT2G18300	Not Available	52.98%
Matrix_500	WRKY43	Not Available	52.96%
Matrix_324	AT2G01060	Not Available	52.90%
Matrix_42	AT2G45680	Not Available	52.82%
Matrix_300	bZIP68; bZIP16	Not Available	52.72%
Matrix_282	bZIP60	Not Available	52.71%
Matrix_518	AT2G21230	Not Available	52.70%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	52.62%
Matrix_447	RVE1	Not Available	52.60%
Matrix_462	ATERF-8	Not Available	52.60%
Matrix_360	ORA59	Not Available	52.55%
Matrix_230	ARR11	Not Available	52.46%
Matrix_422	TOE1	Not Available	52.43%
Matrix_11	TRFL5	Not Available	52.35%
Matrix_249	WRKY11	Not Available	52.26%
Matrix_143	GATA14; GATA6; GATA5	Not Available	52.26%
Motif_602	E2Fc; E2Fd	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	52.25%
Motif_407	CE3OSOSEM	CE3 (Coupling Element 3) found in the promoter of the rice Osem gene; Required for ABA-responsiveness and VP1 activation; Binding site of TRAB1; Motif A and CE3 are functionally equivalent; TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption	52.09%
Matrix_480	BES1	Not Available	52.01%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	52.01%
Matrix_482	AT2G25650; AT4G00270	Not Available	51.99%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	51.94%
Matrix_467	RAV1	Not Available	51.94%
Matrix_477	RAV1	Not Available	51.94%
Matrix_209	RAP2.6	Not Available	51.91%
Matrix_197	NAP	Not Available	51.80%
Matrix_46	AT4G21895	Not Available	51.80%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	51.71%
Motif_60	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	51.71%
Matrix_384	ATWRKY17	Not Available	51.68%
Matrix_352	LEC2	Not Available	51.65%
Matrix_1	TOE2	Not Available	51.61%
Matrix_361	AT1G25550	Not Available	51.60%
Matrix_297	TCP15	Not Available	51.57%
Matrix_432	AT1G77920	Not Available	51.55%
Matrix_142	ZFP8	Not Available	51.50%
Matrix_87	AT1G19000	Not Available	51.45%
Matrix_385	DEAR4	Not Available	51.30%
Matrix_174	ZAT2	Not Available	51.29%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	51.28%
Matrix_380	ATMYR1	Not Available	51.23%
Matrix_180	SPL1	Not Available	51.17%
Matrix_311	TGA1	Not Available	51.14%
Matrix_505	GATA8	Not Available	51.09%
Matrix_181	Dof5.7	Not Available	51.06%
Matrix_12	EIN3; EIL2	Not Available	51.05%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	51.02%
Matrix_254	MYB52	Not Available	50.92%
Motif_238	AtWER	Regulation of CAPRICE transcription by MYB proteins for root epidermis differentiation in Arabidopsis	50.72%
Matrix_241	HB-1; AT5G44180	Not Available	50.65%
Matrix_78	AT3G45610	Not Available	50.55%
Matrix_137	SPL1; SPL12	Not Available	50.50%
Matrix_502	AT3G13040	Not Available	50.45%
Motif_402	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	50.39%
Motif_97	E2Fc; E2Fd	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	50.34%
Matrix_228	TGA2	Not Available	50.34%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	50.30%
Matrix_504	WRKY40	Not Available	50.27%
Matrix_80	BIM1	Not Available	50.09%
Motif_259	AtSR1	A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants	50.07%
Motif_209	AtSR1	A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants	50.07%
Matrix_210	ARR1	Not Available	50.07%
Matrix_339	bHLH104	Not Available	50.06%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	50.05%