| Matrix_84 | AtGRF6 | Not Available | | 77.43% |
| Matrix_489 | RAV1 | Not Available | | 73.33% |
| Matrix_78 | AT3G45610 | Not Available | | 70.88% |
| Matrix_182 | ATHB6 | Not Available | | 66.89% |
| Matrix_35 | YAB5; YAB3 | Not Available | | 66.66% |
| Matrix_241 | HB-1; AT5G44180 | Not Available | | 66.38% |
| Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 65.88% |
| Matrix_425 | TIFY2A | Not Available | | 65.71% |
| Matrix_27 | ATAIB; ATNIG1 | Not Available | | 65.41% |
| Matrix_155 | RAP2.6; ERF110; ABR1 | Not Available | | 64.99% |
| Matrix_243 | RAP2.12; RAP2.2 | Not Available | | 64.04% |
| Matrix_248 | ZFP5 | Not Available | | 63.56% |
| Matrix_177 | ADOF2 | Not Available | | 63.04% |
| Matrix_512 | HAT3 | Not Available | | 61.81% |
| Matrix_137 | SPL1; SPL12 | Not Available | | 61.09% |
| Matrix_65 | POC1; PIL1 | Not Available | | 60.95% |
| Matrix_38 | SPL14 | Not Available | | 60.42% |
| Matrix_239 | AT5G04390 | Not Available | | 59.90% |
| Matrix_423 | AT3G04030 | Not Available | | 58.87% |
| Matrix_112 | TBP2; TFIID-1 | Not Available | | 58.86% |
| Matrix_351 | HAT9; ATHB-4; ATHB2; HAT22; HAT14 | Not Available | | 58.76% |
| Motif_244 | ABRE-like binding site motif | Not Available | | 58.66% |
| Matrix_198 | STZ; C2H2; AZF3 | Not Available | | 58.63% |
| Matrix_411 | DOF5.6 | Not Available | | 58.52% |
| Matrix_139 | OBF5 | Not Available | | 58.42% |
| Matrix_503 | AT2G37430; AT3G53600 | Not Available | | 57.95% |
| Matrix_260 | CAMTA3 | Not Available | | 57.84% |
| Matrix_379 | RHL41 | Not Available | | 57.58% |
| Matrix_100 | AT1G48610 | Not Available | | 57.21% |
| Matrix_436 | AT3G49930; AZF1 | Not Available | | 57.16% |
| Motif_450 | E2FCONSENSUS | E2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plants | | 56.69% |
| Matrix_126 | RBE | Not Available | | 56.59% |
| Matrix_37 | GATA27 | Not Available | | 56.29% |
| Matrix_336 | AT5G08520 | Not Available | | 56.19% |
| Matrix_302 | HAT1; HAT2 | Not Available | | 55.94% |
| Matrix_332 | SPT; ALC | Not Available | | 55.78% |
| Matrix_334 | AT3G23230 | Not Available | | 55.02% |
| Motif_286 | SEBFCONSSTPR10A | Binding site of the potato silencing element binding factor (SEBF) gene found in promoter of pathogenesis-related gene (PR-10a); Located between -45 and -39; Similar to the auxin response element | | 55.01% |
| Matrix_164 | AT1G02030; AT2G45120; AZF2; AT3G60580 | Not Available | | 54.88% |
| Matrix_519 | ATDOF2.4 | Not Available | | 54.62% |
| Motif_165 | AP3SV40 | AP-3 binding site consensus sequence in enhancer regions of SV40, MMTV, MLV, IL2 | | 54.62% |
| Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 54.59% |
| Matrix_418 | KNAT6; KNAT2 | Not Available | | 54.52% |
| Matrix_415 | WRKY27 | Not Available | | 54.51% |
| Matrix_44 | CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2 | Not Available | | 54.43% |
| Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | | 54.34% |
| Matrix_93 | YAB5 | Not Available | | 54.29% |
| Matrix_328 | AT1G76580 | Not Available | | 54.16% |
| Motif_638 | ABRE binding site motif | Not Available | | 54.05% |
| Matrix_142 | ZFP8 | Not Available | | 53.97% |
| Matrix_12 | EIN3; EIL2 | Not Available | | 53.64% |
| Matrix_347 | WOX14; WOX10 | Not Available | | 53.58% |
| Matrix_188 | SPL4 | Not Available | | 53.46% |
| Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 53.45% |
| Matrix_218 | TIFY2B; TIFY1 | Not Available | | 53.43% |
| Matrix_461 | ATHB12 | Not Available | | 53.34% |
| Matrix_152 | EIL1; AT5G65100 | Not Available | | 53.32% |
| Matrix_286 | GATA7 | Not Available | | 53.29% |
| Matrix_46 | AT4G21895 | Not Available | | 53.27% |
| Matrix_296 | GBF2 | Not Available | | 53.01% |
| Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 52.99% |
| Matrix_226 | GATA1 | Not Available | | 52.88% |
| Matrix_99 | DOF4.7 | Not Available | | 52.88% |
| Matrix_53 | MYC3 | Not Available | | 52.80% |
| Matrix_195 | GATA2; GATA4 | Not Available | | 52.72% |
| Matrix_85 | SPL5 | Not Available | | 52.45% |
| Motif_308 | SP8BFIBSP8AIB | One of SPBF binding site (SP8a); Found at -155 of gSPO-A1 (sporamin) gene, and also at -880 of gB-Amy (beta-amylase) gene in sweet potato; SP8BF recognizes both SP8a and SP8b sequences; See also SP8BFIBSP8BIB; SP8BF activity is also found in tobacco; SP8a found in the 5' upstream region of three differnt genes coding for sporamin and beta-amylase; Binding site of SPF1; SPF1 also binds to the SP8b | | 52.39% |
| Matrix_504 | WRKY40 | Not Available | | 52.37% |
| Matrix_395 | AT1G19210; ORA47; AT4G31060; AT5G21960 | Not Available | | 52.32% |
| Motif_495 | TRANSINITMONOCOTS | Context sequence of translational initiation codon in monocots | | 52.32% |
| Matrix_71 | ATHB7 | Not Available | | 52.21% |
| Matrix_197 | NAP | Not Available | | 52.20% |
| Matrix_308 | INO | Not Available | | 52.01% |
| Matrix_487 | AT1G29160 | Not Available | | 51.94% |
| Matrix_70 | GATA26 | Not Available | | 51.87% |
| Matrix_157 | LHY; RVE2 | Not Available | | 51.63% |
| Matrix_151 | ASIL1 | Not Available | | 51.50% |
| Matrix_482 | AT2G25650; AT4G00270 | Not Available | | 51.50% |
| Matrix_505 | GATA8 | Not Available | | 51.40% |
| Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 51.31% |
| Matrix_408 | GATA12 | Not Available | | 51.31% |
| Matrix_225 | MYB52 | Not Available | | 51.29% |
| Matrix_62 | HAT5 | Not Available | | 51.22% |
| Matrix_199 | AT1G69170; SPL9; SPL15; SPL13A; SPL13B | Not Available | | 51.20% |
| Matrix_233 | MYC3 | Not Available | | 51.12% |
| Matrix_14 | ZCW32; AT5G62610 | Not Available | | 51.09% |
| Matrix_303 | ATWOX13 | Not Available | | 50.85% |
| Matrix_96 | TMO6 | Not Available | | 50.83% |
| Matrix_284 | KAN2; KAN3; KAN; KAN4 | Not Available | | 50.79% |
| Matrix_300 | bZIP68; bZIP16 | Not Available | | 50.47% |
| Matrix_341 | HMGA | Not Available | | 50.44% |
| Matrix_165 | KNAT1 | Not Available | | 50.43% |
| Matrix_398 | TBP2; ATTRB2 | Not Available | | 50.34% |
| Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 50.29% |
| Matrix_333 | GATA3 | Not Available | | 50.24% |
| Motif_336 | MYBMOUSE | Binding site for mouse c-myb protein | | 50.19% |
| Motif_627 | ACGTABREMOTIFA2OSEM | Experimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis | | 50.12% |
| Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 50.10% |
| Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 50.01% |
Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench