PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_273
Name: ANAC55
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_20	ANAC030; NST1; NAC066	Not Available	80.21%
Matrix_116	ANAC55	Not Available	79.76%
Matrix_322	NST3; ANAC015; BRN2	Not Available	75.28%
Matrix_420	ANAC58	Not Available	74.36%
Matrix_323	BIM3	Not Available	74.30%
Matrix_282	bZIP60	Not Available	74.10%
Matrix_120	BEE2	Not Available	73.62%
Matrix_228	TGA2	Not Available	73.49%
Matrix_449	BIM2	Not Available	73.46%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	73.28%
Matrix_456	bZIP60	Not Available	72.63%
Matrix_23	ANAC46	Not Available	72.17%
Matrix_465	MYC4	Not Available	71.65%
Matrix_330	MYC2; TT8	Not Available	71.55%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	71.40%
Matrix_204	WOX13	Not Available	71.13%
Matrix_389	ILR3	Not Available	70.66%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	70.63%
Matrix_129	ABF1	Not Available	70.37%
Matrix_188	SPL4	Not Available	67.98%
Matrix_354	AHL12	Not Available	67.05%
Matrix_141	AT3G25990	Not Available	66.38%
Matrix_151	ASIL1	Not Available	66.30%
Matrix_460	NAM; anac025; ATNAC2	Not Available	66.29%
Matrix_259	AT1G50680; AT1G51120	Not Available	65.98%
Motif_295	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	65.84%
Matrix_14	ZCW32; AT5G62610	Not Available	65.46%
Matrix_221	SPL7	Not Available	65.27%
Matrix_171	LBD3; LBD4	Not Available	64.74%
Matrix_332	SPT; ALC	Not Available	64.10%
Matrix_307	RGL2; RGL3	Not Available	63.97%
Motif_128	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	63.50%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	63.44%
Matrix_122	ABF1; AREB2	Not Available	63.20%
Matrix_382	AT3G04850	Not Available	62.86%
Motif_377	SURE2STPAT21	Sucrose Responsive Element 2 (SURE2); A motif conserved among genes regulated by sucrose; See also SURE1ST; Found between -184 and -156 bp in the patatin (a major tuber protein) gene promoter of potato	62.79%
Motif_374	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	62.64%
Matrix_430	TOE2	Not Available	62.49%
Matrix_474	ANAC014; ANAC062; NTL9; TIP	Not Available	62.41%
Matrix_139	OBF5	Not Available	62.16%
Matrix_87	AT1G19000	Not Available	62.02%
Matrix_41	anac058	Not Available	62.02%
Matrix_472	ZN_C2_H2	Not Available	61.95%
Matrix_393	REM1	Not Available	61.36%
Matrix_59	AT4G00238; AT4G00250	Not Available	61.17%
Matrix_469	NAC041; NAC083	Not Available	61.06%
Motif_338	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	61.04%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	60.97%
Matrix_211	MYB3	Not Available	60.77%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	60.75%
Matrix_137	SPL1; SPL12	Not Available	60.68%
Matrix_300	bZIP68; bZIP16	Not Available	60.64%
Matrix_355	ERF10; ERF11	Not Available	60.38%
Matrix_81	YAB1	Not Available	60.32%
Matrix_1	TOE2	Not Available	60.30%
Motif_67	LS5ATPR1	LS5; A negative regulatory element found in the Arabidopsis PR-1 gene promoter; Binding site of TGA2; NPR1 increased the binding of TGA2 to the element; NPR1 is essential in activating systemic, inducible plant defense response; TGA6 expressed in roots in young seedlings; TGA2.1 is a direct transcriptional activator; TGA2.2 stabilizes TGA2.1 binding; The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors	60.25%
Matrix_296	GBF2	Not Available	60.13%
Matrix_277	RAP2.6	Not Available	60.06%
Motif_528	ABI5	The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	60.03%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	59.96%
Matrix_206	CUC1; ANAC100	Not Available	59.96%
Matrix_492	ETT	Not Available	59.91%
Matrix_247	PIF3	Not Available	59.88%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	59.77%
Matrix_143	GATA14; GATA6; GATA5	Not Available	59.67%
Matrix_422	TOE1	Not Available	59.60%
Matrix_432	AT1G77920	Not Available	59.56%
Matrix_128	TGA2	Not Available	59.39%
Motif_499	AtMYC2	A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic growth	59.37%
Matrix_70	GATA26	Not Available	59.11%
Motif_566	AREB1; AREB2	Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses	58.83%
Matrix_166	TGA4	Not Available	58.70%
Matrix_516	ANAC038; ANAC079	Not Available	58.68%
Motif_56	O2F3BE2S1	opaque-2 recognition site F3 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F3 is hybrid of A/G box	58.64%
Motif_680	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	58.50%
Matrix_479	TOE1	Not Available	58.50%
Motif_17	AUXRETGA1GMGH3	TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts	58.44%
Matrix_10	STY1	Not Available	58.34%
Motif_74	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	58.29%
Matrix_233	MYC3	Not Available	58.20%
Matrix_424	MYB59	Not Available	58.18%
Motif_211	ABREMOTIFIOSRAB16B	Motif I found in the promoter of rice rab16B gene; Motif I and motif III are both required for ABA responsiveness; However, each can substitute for the other	58.10%
Matrix_311	TGA1	Not Available	58.09%
Matrix_339	bHLH104	Not Available	57.76%
Matrix_321	HRD	Not Available	57.74%
Matrix_308	INO	Not Available	57.72%
Matrix_373	E2FE	Not Available	57.69%
Matrix_320	MYC4	Not Available	57.40%
Matrix_437	MYC2	Not Available	57.39%
Matrix_331	GBF1	Not Available	57.29%
Motif_177	-300MOTIFZMZEIN	Motif in -300 elements of alpha-zein genes of maize; homologous to the sequence to which transacting factors of AP-1, fos, jun or yeast hisS bind	57.28%
Matrix_212	ATHB-12	Not Available	57.27%
Matrix_341	HMGA	Not Available	57.27%
Matrix_337	MYB46	Not Available	57.21%
Matrix_80	BIM1	Not Available	57.17%
Matrix_475	AT5G64220	Not Available	57.15%
Motif_158	ZDNAFORMINGATCAB1	Z-DNA-forming sequence found in the Arabidopsis chlorophyll a/b binding protein gene (cab1) promoter; Involved in light-dependent developmental expression of the gene; Z-box; Activation of Z-box containing promoters is regulated by downstream regulatory components, COP1 and HY5; phyB and CRY1 photoreceptors act redundantly to induce Z-box containing promoters in white light; Identification of upstream regulatory elements involved in the developmental expression of the Arabidopsis thaliana cab1 gene	57.10%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	57.07%
Matrix_66	AtLEC2	Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis	57.01%
Matrix_181	Dof5.7	Not Available	56.96%
Matrix_274	EDF3	Not Available	56.94%
Matrix_335	HSFB2A	Not Available	56.91%
Motif_665	ACEATCHS	ACEAtCHS (ACGT containing element) found in the LRU (light-responsive unit) in Arabidopsis chalcone synthase (CHS) gene promoter; Required for UV-B and UV-1/blue light responsiveness; Transcriptional repression by AtMYB4 controls production of UV-protecting sun screens in Arabidopsis; AtMYB4 mutant shows enhanced levels of sinapate ester in leaves and tolerance of UV-B irradiation; AtMYB4 expression is downregulated by exposure to UV-B light; Identification of UV/blue light-response elements in the Arabidopsis thaliana chalcone synthase promoter using a homologous protoplast transient expression system	56.80%
Matrix_57	WIN1; SHN3; SHN2	Not Available	56.76%
Matrix_255	cdf3	Not Available	56.65%
Matrix_333	GATA3	Not Available	56.62%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	56.60%
Matrix_109	GBF3	Not Available	56.53%
Matrix_265	NGA3	Not Available	56.45%
Matrix_193	RAV1	Not Available	56.45%
Matrix_418	KNAT6; KNAT2	Not Available	56.35%
Motif_573	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	56.33%
Matrix_108	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	56.29%
Matrix_260	CAMTA3	Not Available	56.27%
Matrix_433	ATERF1	Not Available	56.27%
Matrix_480	BES1	Not Available	56.05%
Matrix_46	AT4G21895	Not Available	55.93%
Matrix_167	ZAT6	Not Available	55.89%
Matrix_50	ATERF14; AT5G43410	Not Available	55.88%
Matrix_61	ATCBF3	Not Available	55.83%
Matrix_491	AT1G68670; AT3G25790	Not Available	55.82%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	55.80%
Matrix_396	AP3	Not Available	55.71%
Motif_53	ABREA2HVA1	A2 of ABRC3; ABRC3 (ABA response complex 3) of HVA1 consists of CE3 and A2; ABA responsive element; stress response; Found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant (Lea) protein; ABRC1 OF HVA22 consists of CE1 and A3	55.66%
Matrix_227	AT1G64620	Not Available	55.64%
Matrix_55	PIF3	Not Available	55.60%
Matrix_513	SOL1; TSO1; TCX2	Not Available	55.58%
Motif_162	ABRE3HVA22	ABRE3 of barley HVA22 gene; G-box; component of ABA response complex in HVA22 gene; ABA response complex 1(ABRC1)=A3(previously designated ABRE3)+CE1	55.38%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	55.36%
Matrix_446	LBD16	Not Available	55.35%
Matrix_162	AtPHR1	Not Available	55.30%
Matrix_53	MYC3	Not Available	55.25%
Matrix_438	AtbZIP63	Not Available	55.18%
Matrix_125	AHL12	Not Available	55.18%
Matrix_374	AT5G07580; AT5G61590	Not Available	55.12%
Matrix_404	OBP4	Not Available	55.01%
Matrix_60	AT1G01260; AT5G57150	Not Available	55.00%
Matrix_165	KNAT1	Not Available	55.00%
Motif_19	AAGACGTAGATACL12	Sequence found in Arabidopsis acyl carrier protein (ACP), Acl1.2, gene promoter; Contains bZIP core motif (ACGT)	54.99%
Matrix_489	RAV1	Not Available	54.92%
Motif_275	AtbZIP1	The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding	54.91%
Matrix_37	GATA27	Not Available	54.88%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	54.87%
Matrix_16	AT3G04450; PHL1	Not Available	54.87%
Matrix_156	POC1	Not Available	54.85%
Matrix_328	AT1G76580	Not Available	54.84%
Matrix_365	AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1	Not Available	54.81%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	54.72%
Matrix_8	KAN1	Not Available	54.68%
Matrix_416	ASL5	Not Available	54.64%
Matrix_363	RAP2.3	Not Available	54.64%
Matrix_142	ZFP8	Not Available	54.62%
Matrix_145	GBF4; AT5G44080	Not Available	54.43%
Matrix_299	PFG3	Not Available	54.42%
Matrix_442	AT5G62260	Not Available	54.39%
Matrix_84	AtGRF6	Not Available	54.36%
Motif_202	OPAQUE2ZM22Z	Opaque-2 (O2) target sequence in maize 22- and 27-kD zein promoters; ACGT motif; Related to seed expression; O2 target sequence; Gene: maize 22-kD zein; transacting factor: 02	54.35%
Motif_244	ABRE-like binding site motif	Not Available	54.33%
Matrix_463	HAT3.1	Not Available	54.32%
Matrix_85	SPL5	Not Available	54.29%
Matrix_150	UNE10; PIF7	Not Available	54.28%
Matrix_17	WRKY22	Not Available	54.19%
Matrix_362	DEAR3	Not Available	54.16%
Matrix_225	MYB52	Not Available	54.16%
Matrix_69	AT2G03500	Not Available	54.15%
Motif_92	ABREATRD22	ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22	54.12%
Matrix_236	CCA1	Not Available	54.08%
Matrix_111	ABF3	Not Available	54.08%
Matrix_315	MYB111	Not Available	54.07%
Matrix_369	AT2G18300	Not Available	53.94%
Motif_512	GLMHVCHORD	GLM (GCN4-like motif) found in the promoter of barley B1- and c-hordein gene; Involved in the nitrogen response of c-hordein promoter; SPA, a seed-specific basic leucine zipper protein from wheat, can activate transcription from the GCN4-like motif (GLM) of -326 LMWG-1D1 promoter	53.92%
Matrix_512	HAT3	Not Available	53.88%
Motif_542	ABI5; AtMYC2; HY5	A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic growth. Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	53.87%
Matrix_113	ABI5	Not Available	53.86%
Matrix_253	ETT	Not Available	53.84%
Matrix_476	bHLH115; bHLH34	Not Available	53.81%
Matrix_97	APRR2	Not Available	53.77%
Matrix_174	ZAT2	Not Available	53.70%
Motif_571	GBOXSORBCS1	G-box found in the spinach RBCS-1 gene promoter; Located between -219 and -212; G-box trimer confers relatively high level expression in roots	53.69%
Matrix_450	SPL7	Not Available	53.67%
Motif_642	SEF1MOTIF	SEF1 (soybean embryo factor 1) binding motif; sequence found in 5'-upstream region (-640; -765) of soybean beta-conglicinin (7S globulin) gene	53.58%
Matrix_93	YAB5	Not Available	53.55%
Matrix_240	AT4G29000	Not Available	53.54%
Matrix_4	ARR14	Not Available	53.52%
Matrix_178	HSFB2A	Not Available	53.51%
Matrix_101	ERF5	Not Available	53.45%
Matrix_409	DEAR3	Not Available	53.32%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	53.31%
Matrix_112	TBP2; TFIID-1	Not Available	53.24%
Motif_51	MYB46	Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis	53.21%
Motif_590	MYB3 binding site motif	Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses	53.15%
Motif_252	GBOXPC	G box; Binding site of parsley cytosolic G-box binding factors (cytosolic GBFs); Cytosolic G-Box binding activity is modulated by light; DNA binding activity of cytosolic GBFs is regulated by cytosolic phosphorylation/dephospholylation activities; Cytosolic GBFs are translocated to the nucleus in a light-regulated manner	53.14%
Matrix_210	ARR1	Not Available	53.13%
Matrix_388	SNZ; SMZ; TOE2	Not Available	53.02%
Motif_483	ABREMOTIFAOSOSEM	motif A ABRE-like sequence found in rice Osem gene promoter; Essential for activation by VP1; Important for regulation by ABA;TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption;ABRE motif A found in the promoter of the rice Osem gene; ACGT-containing ABRE; Required for ABA-responsiveness and VP1 activation; Binding site of TRAB1; Motif A and CE3 are functionally equivalent; TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption	53.00%
Motif_498	SGBFGMGMAUX28	bZIP proteins SGBF-1 and SGBF-2 binding site in soybean GmAux28 gene promoter	52.99%
Motif_487	ACIIIPVPAL2	ACIII element found at -246 to -238 of bean PAL2 promoter; ACIII element is required for vascular-specific gene expression; See also ACIPVPAL2 and ACIIPVPAL2; Three AC-elements, which are possible Myb protein binding sites, together with a G-box, interact to direct the complex patterns of tissu-specific expression of pAL2 gene	52.97%
Motif_89	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	52.95%
Matrix_134	ABF1	Not Available	52.90%
Motif_200	GBOXLERBCS	G box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBF	52.83%
Motif_265	GCAACREPEATZMZEIN	GCAAC repeat found in the 22bp recognition site for beta-1 factor in the promoter of beta-zein (prolamin type) gene of maize; GCAAC is the core recognition sequence of the protein encoded by the retroviral oncogene myb	52.80%
Motif_617	ABRE3HVA1	ABA responsive element, ABRE3, found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant protein; stress response	52.65%
Motif_418	ABRE2HVA22	ABRE2 of barley HVA22 gene; G-box; component of ABA response complex in HVA22 gene; see ABRE3 of HVA22 gene; see CE1 (coupling element 1 = TGCCACCGG)	52.61%
Matrix_152	EIL1; AT5G65100	Not Available	52.59%
Matrix_286	GATA7	Not Available	52.50%
Motif_639	WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis	52.47%
Motif_685	PALINDROMICCBOXGM	Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence	52.47%
Matrix_119	RRTF1	Not Available	52.47%
Motif_507	ABASEED1	ABA regulation; seed expression; Gene: carrot Dc3; Transacting factor: bZIP; Contains ACGT motif	52.45%
Motif_197	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	52.45%
Motif_112	GBOX10NT	One of 11 G-box sequences in tobacco; Required for high-level constitutive expression in seed, leaf, root, axillary bud, almost all parts of flower buds and pollen	52.45%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	52.43%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	52.42%
Matrix_64	PIF5	Not Available	52.41%
Matrix_402	TOE1	Not Available	52.32%
Matrix_126	RBE	Not Available	52.31%
Matrix_27	ATAIB; ATNIG1	Not Available	52.29%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	52.29%
Motif_300	ACGTROOT1; HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. ACGT motif related to root expression; Gene: synthetic; perfect palindromic sequence (PA) containing G-box-related sequence; transacting factor: TAF-1; Binding of SGBF-1 (a Soybean G-box binding bZIP transcription factor) to ABRE is enhanced by SCOF-1 (a zinc finger protein ); Transcription of SCOF-1 is induced by low temperature and ABA	52.29%
Matrix_379	RHL41	Not Available	52.22%
Motif_652	AUXRETGA2GMGH3	TGA-box #2 in putative auxin-resonsive element (AUXRE) E1 of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts; Hex-like element; E1 element=-249 to -203; E2 element=-241 to -224	52.21%
Matrix_153	AP2	Not Available	52.21%
Matrix_324	AT2G01060	Not Available	52.18%
Matrix_100	AT1G48610	Not Available	52.18%
Matrix_104	PI	Not Available	52.15%
Matrix_198	STZ; C2H2; AZF3	Not Available	52.12%
Motif_662	MYB26PS	Myb26 binding site; Myb26 recognizes the c-Myb and P-box-like binding sites representing cis-elements in the promoter regions of several phenylpropanoid biosynthetic genes; Identical to P-box in maize, and to Myb305 binding site in snapdragon	52.11%
Matrix_239	AT5G04390	Not Available	52.07%
Matrix_313	ATMYB65; MYB33	Not Available	52.03%
Matrix_415	WRKY27	Not Available	52.00%
Matrix_288	RAP2.3	Not Available	51.99%
Matrix_352	LEC2	Not Available	51.86%
Matrix_397	GT2L	Not Available	51.84%
Motif_406	ABREBZMRAB28	ABA-responsive element (ABRE B) found at -105 to -96 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues	51.82%
Matrix_7	PIF4	Not Available	51.72%
Matrix_241	HB-1; AT5G44180	Not Available	51.70%
Matrix_258	WOX13	Not Available	51.70%
Matrix_503	AT2G37430; AT3G53600	Not Available	51.66%
Motif_212	GARE2OSREP1	Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice	51.62%
Matrix_410	TOE2	Not Available	51.61%
Motif_638	ABRE binding site motif	Not Available	51.59%
Matrix_182	ATHB6	Not Available	51.53%
Matrix_444	AT1G19485; AT4G17950	Not Available	51.49%
Matrix_493	AT1G22985; AT1G71130	Not Available	51.48%
Motif_648	ARE2	ARE (antioxidant response element); antioxidant response element of mouse metallothionein-I (MT-I) gene; Consensus sequence of mouse MT-I and MT-II genes, and MT genes isolated from rat, hamster, human, sheep, chicken, Drosophila melanogaster, C. elegans; See ARE1	51.44%
Matrix_452	MYB46	Not Available	51.43%
Matrix_448	ATERF6	Not Available	51.43%
Matrix_243	RAP2.12; RAP2.2	Not Available	51.43%
Motif_323	MYB1LEPR	Tomato Pti4(ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1(GTTAGTT), G box (CACGTG))	51.42%
Motif_599	LREBOXIIPCCHS1; HY5	BoxII; Light responsive element (LRE) found in the parsley CHS-1 (chalcone synthase-1) gene promoter; Required for light responsiveness; nuclear protein binding site; Highly conserved in various light inducible gene promoters; Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	51.41%
Matrix_287	ERF2	Not Available	51.34%
Matrix_361	AT1G25550	Not Available	51.29%
Matrix_163	AT2G20110	Not Available	51.25%
Matrix_75	WRKY29	Not Available	51.17%
Matrix_31	SPL1	Not Available	51.14%
Matrix_138	RRTF1	Not Available	51.09%
Matrix_511	AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180	Not Available	51.06%
Motif_422	SP8BFIBSP8BIB	One of SPBF binding site (SP8b); Found at -330, -220, and -200 of gSPO-B1 (sporamin) gene, and also at -80 of gB-Amy (beta-amylase) gene; SP8BF recognizes both SP8a and SP8b sequences; See also SP8BFIBSP8AIB; SP8BF activity is also found in tobacco; SP8b found in the 5' upstream region of three differnt genes coding for sporamin and beta-amylase; Binding site of SPF1; SPF1 also binds to the SP8b	51.05%
Matrix_500	WRKY43	Not Available	51.03%
Matrix_177	ADOF2	Not Available	51.00%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	50.99%
Matrix_90	BEE1; BEE3; AT3G07340; AT5G48560; AT5G50915	Not Available	50.93%
Motif_86	ACGTABOX	A-box according to the nomenclature of ACGT elements; One of ACGT elements; Found in ocs gene; RITA-1 binding site; G motif; G motif and TATCCAY motif (a GATA motif as its antisense sequence) are responsible for sugar repression	50.87%
Matrix_91	CRF3	Not Available	50.85%
Matrix_114	EPR1; AT3G10113	Not Available	50.79%
Motif_5	SORLREP1	Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	50.77%
Motif_544	CACGCAATGMGH3	Sequence found in D4 element in Soybean GH3 gene promoter; Showed constitutive activity with TGTCTC element; Confers auxin inducibility; Binding site of nuclear protein	50.75%
Matrix_261	ATERF-1	Not Available	50.62%
Motif_394	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	50.55%
Matrix_411	DOF5.6	Not Available	50.53%
Motif_400	ABREAZMRAB28	ABA-responsive element (ABRE A) found at -148 to -139 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues	50.49%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	50.42%
Matrix_440	LFY	Not Available	50.38%
Matrix_249	WRKY11	Not Available	50.34%
Matrix_244	DREB2C	Not Available	50.34%
Matrix_436	AT3G49930; AZF1	Not Available	50.32%
Matrix_477	RAV1	Not Available	50.30%
Matrix_467	RAV1	Not Available	50.30%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	50.30%
Motif_107	O2F2BE2S1	opaque-2 recognition site F2 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F2 is a new O2-binding sequence related to the O2 target sites of the Coix alpha-coxin, the maize b-32 genes and the AP-1 pseudopalindrome	50.27%
Motif_76	SURE1STPAT21	Sucrose Responsive Element (SURE); A motif conserved among genes regulated by sucrose; See also SURE2STPAT21; Found between -184 and -156 bp in the patatin (a major tuber protein) gene promoter of potato	50.22%
Matrix_65	POC1; PIL1	Not Available	50.21%
Motif_250	ACGTOSGLUB1	ACGT motif found in GluB-1 gene in rice; Required for endosperm-specific expression; Conserved in the 5'-flanking region of glutelin genes; Combination of GCN4, AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression	50.19%
Matrix_336	AT5G08520	Not Available	50.18%
Matrix_421	GLK1	Not Available	50.18%
Motif_116	INRNTPSADB	Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box	50.15%
Matrix_78	AT3G45610	Not Available	50.11%
Matrix_176	MYB98	Not Available	50.11%
Matrix_170	AT5G47660	Not Available	50.09%
Matrix_96	TMO6	Not Available	50.08%
Matrix_385	DEAR4	Not Available	50.01%