Matrix_186 | FHY3 | Not Available | | 73.50% |
Matrix_481 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 67.95% |
Matrix_192 | FHY3/FAR1 | Not Available | | 67.54% |
Matrix_113 | ABI5 | Not Available | | 67.36% |
Matrix_434 | ARR11 | Not Available | | 67.19% |
Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 66.90% |
Matrix_518 | AT2G21230 | Not Available | | 66.69% |
Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 66.54% |
Matrix_408 | GATA12 | Not Available | | 66.39% |
Matrix_195 | GATA2; GATA4 | Not Available | | 66.17% |
Matrix_369 | AT2G18300 | Not Available | | 65.24% |
Matrix_226 | GATA1 | Not Available | | 63.19% |
Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 62.96% |
Matrix_161 | MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570 | Not Available | | 62.92% |
Matrix_286 | GATA7 | Not Available | | 62.63% |
Matrix_447 | RVE1 | Not Available | | 62.54% |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 62.37% |
Matrix_109 | GBF3 | Not Available | | 62.32% |
Matrix_366 | ARR14 | Not Available | | 62.18% |
Matrix_93 | YAB5 | Not Available | | 62.11% |
Matrix_56 | BZIP17; BZIP28; BZIP49 | Not Available | | 62.10% |
Matrix_154 | AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130 | Not Available | | 62.03% |
Matrix_25 | AP3 | Not Available | | 61.24% |
Matrix_373 | E2FE | Not Available | | 61.05% |
Matrix_203 | GATA9; GATA12 | Not Available | | 60.89% |
Matrix_255 | cdf3 | Not Available | | 60.80% |
Matrix_72 | CDF2 | Not Available | | 60.55% |
Matrix_92 | AT1G33760 | Not Available | | 60.49% |
Matrix_53 | MYC3 | Not Available | | 60.44% |
Matrix_312 | ARF11; MP; ARF6; IAA21; ARF8; ARF4 | Not Available | | 60.38% |
Matrix_446 | LBD16 | Not Available | | 60.03% |
Matrix_351 | HAT9; ATHB-4; ATHB2; HAT22; HAT14 | Not Available | | 59.71% |
Matrix_167 | ZAT6 | Not Available | | 59.47% |
Motif_209 | AtSR1 | A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants | | 59.40% |
Matrix_128 | TGA2 | Not Available | | 59.27% |
Matrix_463 | HAT3.1 | Not Available | | 59.21% |
Matrix_380 | ATMYR1 | Not Available | | 59.00% |
Matrix_419 | TGA9; PAN; TGA6; bZIP65 | Not Available | | 58.92% |
Matrix_377 | AT1G75490; DREB2C; AT2G40350; AT5G18450 | Not Available | | 58.80% |
Matrix_271 | AT3G16350 | Not Available | | 58.75% |
Matrix_277 | RAP2.6 | Not Available | | 58.56% |
Matrix_331 | GBF1 | Not Available | | 58.56% |
Matrix_227 | AT1G64620 | Not Available | | 58.54% |
Motif_92 | ABREATRD22 | ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22 | | 58.53% |
Matrix_395 | AT1G19210; ORA47; AT4G31060; AT5G21960 | Not Available | | 58.33% |
Matrix_77 | PRR5 | Not Available | | 58.27% |
Matrix_399 | TGA1 | Not Available | | 58.13% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 58.10% |
Matrix_387 | ORA47 | Not Available | | 58.01% |
Matrix_332 | SPT; ALC | Not Available | | 57.79% |
Matrix_355 | ERF10; ERF11 | Not Available | | 57.77% |
Matrix_433 | ATERF1 | Not Available | | 57.72% |
Matrix_454 | AT1G77200; ATERF38; AT4G16750; AT5G52020 | Not Available | | 57.70% |
Matrix_418 | KNAT6; KNAT2 | Not Available | | 57.66% |
Matrix_311 | TGA1 | Not Available | | 57.65% |
Motif_541 | AtSR1 | A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants | | 57.65% |
Matrix_432 | AT1G77920 | Not Available | | 57.65% |
Matrix_37 | GATA27 | Not Available | | 57.60% |
Matrix_89 | SOC1 | Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 57.56% |
Matrix_181 | Dof5.7 | Not Available | | 57.51% |
Matrix_61 | ATCBF3 | Not Available | | 57.48% |
Matrix_328 | AT1G76580 | Not Available | | 57.30% |
Matrix_308 | INO | Not Available | | 57.15% |
Matrix_174 | ZAT2 | Not Available | | 57.10% |
Matrix_472 | ZN_C2_H2 | Not Available | | 57.07% |
Matrix_448 | ATERF6 | Not Available | | 57.02% |
Matrix_392 | ARR2 | Not Available | | 56.93% |
Matrix_224 | ERF1 | Not Available | | 56.89% |
Matrix_210 | ARR1 | Not Available | | 56.73% |
Motif_616 | BZIP12; ABI5 | The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis | | 56.71% |
Matrix_151 | ASIL1 | Not Available | | 56.67% |
Matrix_505 | GATA8 | Not Available | | 56.65% |
Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 56.61% |
Matrix_302 | HAT1; HAT2 | Not Available | | 56.57% |
Matrix_4 | ARR14 | Not Available | | 56.55% |
Matrix_122 | ABF1; AREB2 | Not Available | | 56.55% |
Matrix_157 | LHY; RVE2 | Not Available | | 56.53% |
Matrix_50 | ATERF14; AT5G43410 | Not Available | | 56.53% |
Matrix_172 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 56.43% |
Matrix_57 | WIN1; SHN3; SHN2 | Not Available | | 56.29% |
Matrix_80 | BIM1 | Not Available | | 56.29% |
Matrix_501 | DAG2 | Not Available | | 56.28% |
Matrix_350 | ARR14 | Not Available | | 56.23% |
Matrix_206 | CUC1; ANAC100 | Not Available | | 56.13% |
Matrix_155 | RAP2.6; ERF110; ABR1 | Not Available | | 56.11% |
Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 56.10% |
Matrix_296 | GBF2 | Not Available | | 56.06% |
Matrix_406 | ATERF-7 | Not Available | | 55.95% |
Matrix_300 | bZIP68; bZIP16 | Not Available | | 55.80% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 55.78% |
Matrix_420 | ANAC58 | Not Available | | 55.78% |
Matrix_169 | E2F1 | Not Available | | 55.76% |
Matrix_244 | DREB2C | Not Available | | 55.70% |
Matrix_166 | TGA4 | Not Available | | 55.69% |
Matrix_363 | RAP2.3 | Not Available | | 55.69% |
Matrix_335 | HSFB2A | Not Available | | 55.65% |
Matrix_66 | AtLEC2 | Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis | | 55.64% |
Matrix_423 | AT3G04030 | Not Available | | 55.63% |
Matrix_160 | RVE1 | Not Available | | 55.60% |
Matrix_284 | KAN2; KAN3; KAN; KAN4 | Not Available | | 55.45% |
Matrix_230 | ARR11 | Not Available | | 55.43% |
Matrix_409 | DEAR3 | Not Available | | 55.43% |
Matrix_313 | ATMYB65; MYB33 | Not Available | | 55.39% |
Matrix_265 | NGA3 | Not Available | | 55.35% |
Matrix_193 | RAV1 | Not Available | | 55.35% |
Matrix_424 | MYB59 | Not Available | | 55.33% |
Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 55.28% |
Matrix_12 | EIN3; EIL2 | Not Available | | 55.09% |
Matrix_394 | DREB_U | Not Available | | 55.04% |
Matrix_67 | GLK1 | Not Available | | 55.02% |
Motif_540 | CCA1 motif1 BS in CAB1 | A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene | | 54.98% |
Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 54.97% |
Motif_232 | ABADESI1 | Responsive to ABA and desiccation; Motif I of rice rab16A-D (initially called rab-21); Expressed in seeds late during embryogenesis; Induced by ABA and osmotic stress in vegetative tissues; Contains ACGT motif; transacting factor: TAF-1 | | 54.96% |
Matrix_322 | NST3; ANAC015; BRN2 | Not Available | | 54.96% |
Matrix_502 | AT3G13040 | Not Available | | 54.87% |
Matrix_97 | APRR2 | Not Available | | 54.84% |
Matrix_462 | ATERF-8 | Not Available | | 54.80% |
Matrix_260 | CAMTA3 | Not Available | | 54.77% |
Matrix_104 | PI | Not Available | | 54.76% |
Matrix_383 | CCA1 | Not Available | | 54.74% |
Matrix_336 | AT5G08520 | Not Available | | 54.69% |
Matrix_71 | ATHB7 | Not Available | | 54.65% |
Matrix_398 | TBP2; ATTRB2 | Not Available | | 54.56% |
Matrix_321 | HRD | Not Available | | 54.51% |
Matrix_58 | WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30 | Not Available | | 54.47% |
Matrix_229 | CDC5 | A cdc5+ homolog of a higher plant, Arabidopsis thaliana | | 54.46% |
Matrix_340 | HSFC1 | Not Available | | 54.33% |
Matrix_461 | ATHB12 | Not Available | | 54.32% |
Matrix_44 | CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2 | Not Available | | 54.27% |
Matrix_385 | DEAR4 | Not Available | | 54.25% |
Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 54.24% |
Matrix_171 | LBD3; LBD4 | Not Available | | 54.19% |
Matrix_114 | EPR1; AT3G10113 | Not Available | | 54.14% |
Matrix_26 | ATMYB3; MYB24 | Not Available | | 53.86% |
Matrix_258 | WOX13 | Not Available | | 53.82% |
Matrix_280 | TCP24; TCP1; BRC2; ATTCP18 | Not Available | | 53.74% |
Matrix_10 | STY1 | Not Available | | 53.72% |
Matrix_41 | anac058 | Not Available | | 53.66% |
Matrix_254 | MYB52 | Not Available | | 53.66% |
Matrix_425 | TIFY2A | Not Available | | 53.61% |
Matrix_17 | WRKY22 | Not Available | | 53.59% |
Matrix_264 | ATAREB1 | Not Available | | 53.56% |
Matrix_438 | AtbZIP63 | Not Available | | 53.56% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 53.48% |
Matrix_212 | ATHB-12 | Not Available | | 53.47% |
Matrix_88 | AHL12 | Not Available | | 53.46% |
Matrix_330 | MYC2; TT8 | Not Available | | 53.43% |
Matrix_465 | MYC4 | Not Available | | 53.39% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 53.36% |
Matrix_106 | AT5G47390 | Not Available | | 53.33% |
Matrix_60 | AT1G01260; AT5G57150 | Not Available | | 53.31% |
Matrix_152 | EIL1; AT5G65100 | Not Available | | 53.30% |
Matrix_69 | AT2G03500 | Not Available | | 53.30% |
Matrix_200 | PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815 | Not Available | | 53.25% |
Matrix_38 | SPL14 | Not Available | | 53.21% |
Matrix_449 | BIM2 | Not Available | | 53.11% |
Matrix_361 | AT1G25550 | Not Available | | 53.09% |
Matrix_158 | AT1G03040; LRL1; UNE12; LRL2; LRL3 | Not Available | | 52.98% |
Matrix_237 | MYB55 | Not Available | | 52.96% |
Matrix_493 | AT1G22985; AT1G71130 | Not Available | | 52.96% |
Matrix_522 | GATA11; GATA13 | Not Available | | 52.92% |
Matrix_467 | RAV1 | Not Available | | 52.90% |
Matrix_34 | RAV1_2 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 52.90% |
Matrix_477 | RAV1 | Not Available | | 52.90% |
Matrix_46 | AT4G21895 | Not Available | | 52.89% |
Matrix_11 | TRFL5 | Not Available | | 52.80% |
Matrix_87 | AT1G19000 | Not Available | | 52.79% |
Matrix_495 | HD-GL2-1; ANL2 | Not Available | | 52.63% |
Matrix_182 | ATHB6 | Not Available | | 52.62% |
Matrix_389 | ILR3 | Not Available | | 52.55% |
Motif_244 | ABRE-like binding site motif | Not Available | | 52.53% |
Matrix_324 | AT2G01060 | Not Available | | 52.52% |
Matrix_76 | GATA10 | Not Available | | 52.52% |
Matrix_416 | ASL5 | Not Available | | 52.50% |
Matrix_241 | HB-1; AT5G44180 | Not Available | | 52.46% |
Matrix_290 | AP2 | Not Available | | 52.44% |
Matrix_16 | AT3G04450; PHL1 | Not Available | | 52.43% |
Matrix_119 | RRTF1 | Not Available | | 52.42% |
Matrix_323 | BIM3 | Not Available | | 52.39% |
Matrix_75 | WRKY29 | Not Available | | 52.34% |
Matrix_451 | STY1 | Not Available | | 52.34% |
Motif_282 | D4GMAUX28 | D4; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; D1 and D4 share a very similar core sequence TAGTXXCTGT and TAGTXCTGT, respectively; D1/D4-like sequence were identified in several other auxin-responsive genes | | 52.33% |
Matrix_145 | GBF4; AT5G44080 | Not Available | | 52.33% |
Matrix_287 | ERF2 | Not Available | | 52.32% |
Matrix_142 | ZFP8 | Not Available | | 52.32% |
Matrix_101 | ERF5 | Not Available | | 52.21% |
Matrix_494 | OBP4 | Not Available | | 52.19% |
Matrix_507 | TCP3 | Not Available | | 52.15% |
Motif_516 | BZIP12; ABI5 | The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis | | 52.15% |
Matrix_150 | UNE10; PIF7 | Not Available | | 52.15% |
Matrix_476 | bHLH115; bHLH34 | Not Available | | 52.07% |
Matrix_23 | ANAC46 | Not Available | | 52.07% |
Matrix_176 | MYB98 | Not Available | | 52.02% |
Matrix_120 | BEE2 | Not Available | | 51.99% |
Matrix_263 | WRKY33; WRKY19; WRKY32 | Not Available | | 51.98% |
Matrix_85 | SPL5 | Not Available | | 51.95% |
Matrix_8 | KAN1 | Not Available | | 51.85% |
Matrix_337 | MYB46 | Not Available | | 51.82% |
Matrix_489 | RAV1 | Not Available | | 51.79% |
Matrix_91 | CRF3 | Not Available | | 51.78% |
Motif_259 | AtSR1 | A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants | | 51.78% |
Motif_315 | AtSR1 | A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants | | 51.77% |
Motif_534 | GBOXRELOSAMY3 | G box-related element found in Amy3D (amylase) promoter of rice; Similar to ABRE | | 51.77% |
Matrix_440 | LFY | Not Available | | 51.73% |
Matrix_156 | POC1 | Not Available | | 51.73% |
Matrix_73 | DEAR3; RAP2.9; RAP2.10 | Not Available | | 51.68% |
Motif_446 | C1MOTIFZMBZ2 | C1-motif; Similar to Myb-box; Found in the promoter region of maize Bronze2 ( glutathione S-transferase) gene; C1 binding; C1-motif and R-motif were shown to be important for full R and C1 activation of the Bz2 promoter | | 51.67% |
Matrix_162 | AtPHR1 | Not Available | | 51.66% |
Matrix_478 | AT1G01250 | Not Available | | 51.54% |
Matrix_199 | AT1G69170; SPL9; SPL15; SPL13A; SPL13B | Not Available | | 51.53% |
Matrix_40 | TCP2 | Not Available | | 51.53% |
Matrix_435 | ATHB51 | Not Available | | 51.45% |
Matrix_352 | LEC2 | Not Available | | 51.44% |
Motif_311 | ANAC019; ANAC055; ANAC072 | Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter | | 51.41% |
Matrix_512 | HAT3 | Not Available | | 51.41% |
Matrix_452 | MYB46 | Not Available | | 51.40% |
Matrix_370 | WRKY50; WRKY51 | Not Available | | 51.37% |
Matrix_6 | AT1G70000 | Not Available | | 51.37% |
Matrix_404 | OBP4 | Not Available | | 51.33% |
Matrix_457 | TGA2 | Not Available | | 51.31% |
Matrix_223 | MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1 | Not Available | | 51.31% |
Matrix_141 | AT3G25990 | Not Available | | 51.30% |
Matrix_139 | OBF5 | Not Available | | 51.26% |
Matrix_253 | ETT | Not Available | | 51.25% |
Matrix_201 | AT1G74840 | Not Available | | 51.24% |
Matrix_164 | AT1G02030; AT2G45120; AZF2; AT3G60580 | Not Available | | 51.18% |
Matrix_315 | MYB111 | Not Available | | 51.12% |
Matrix_480 | BES1 | Not Available | | 51.05% |
Motif_243 | TELOBOXATEEF1AA1 | telo-box (telomere motif) found in the Arabidopsis (A.t.) eEF1AA1 gene promoter; Conserved in all known plant eEF1A gene promoters; Found in the 5' region of numerous genes encoding components of the translational apparatus; Required for the activation of expression in root primordia; Acts co-operatively with tef-box; Binding site of AtPur alpha-1; Plant interstitial telomere mitifs participate in the control of gene expression in root meristems | | 50.94% |
Matrix_391 | AHL20 | Not Available | | 50.92% |
Matrix_299 | PFG3 | Not Available | | 50.86% |
Motif_443 | KN1; BP | The knotted1-like homeobox gene BREVIPEDICELLUS regulates cell differentiation by modulating metabolic pathways. Selective interaction of plant homeodomain proteins mediates high DNA-binding affinity | | 50.78% |
Matrix_327 | ARR11 | Not Available | | 50.77% |
Matrix_144 | AT5G08330; AT5G23280 | Not Available | | 50.70% |
Matrix_288 | RAP2.3 | Not Available | | 50.68% |
Matrix_412 | GL1 | Not Available | | 50.64% |
Matrix_36 | RAV1_1 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 50.63% |
Motif_249 | DPBF1&2 binding site motif | A novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid system | | 50.58% |
Matrix_365 | AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1 | Not Available | | 50.53% |
Motif_158 | ZDNAFORMINGATCAB1 | Z-DNA-forming sequence found in the Arabidopsis chlorophyll a/b binding protein gene (cab1) promoter; Involved in light-dependent developmental expression of the gene; Z-box; Activation of Z-box containing promoters is regulated by downstream regulatory components, COP1 and HY5; phyB and CRY1 photoreceptors act redundantly to induce Z-box containing promoters in white light; Identification of upstream regulatory elements involved in the developmental expression of the Arabidopsis thaliana cab1 gene | | 50.51% |
Matrix_393 | REM1 | Not Available | | 50.50% |
Matrix_233 | MYC3 | Not Available | | 50.48% |
Matrix_131 | HDG12; EDT1; GL2; HDG8 | Not Available | | 50.35% |
Matrix_52 | ZAT18 | Not Available | | 50.26% |
Matrix_482 | AT2G25650; AT4G00270 | Not Available | | 50.22% |
Matrix_410 | TOE2 | Not Available | | 50.21% |
Motif_371 | DRE-like promoter motif | The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses | | 50.10% |
Matrix_135 | ABI3 | Not Available | | 50.06% |
Matrix_184 | AGL15 | Not Available | | 50.02% |