InterPro domain page  


InterPro id
IPR021158
Description
Peptidase M10A, cysteine switch, zinc binding site
Number of genes
7

InterPro distribution

ath
Arabidopsis thaliana(3 genes)
cre
Chlamydomonas reinhardtii(1 genes)
ptr
Populus trichocarpa(2 genes)
rco
Ricinus communis(1 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:

Page 1 of 1, showing 7 records out of 7 total, starting on record 1, ending on 7

gene_id species description comment strand chr type
CR17G04700 cre name=estExt_GenewiseH_1.C_970004;pid=60542;prot=eq;tid=60542;transcript=eq + chromosome_17 coding
PT19G09090 ptr PACid=17314225;name=POPTR_0019s10230;alias=pt010173m; transcript=eq;prot=eq;protein_id=17314225; - scaffold_19 coding
PT00G22520 ptr PACid=17334214;name=POPTR_1544s00200;alias=pt037119m; transcript=eq;prot=eq;protein_id=17334214; + scaffold_1544 coding
RC27428G00050 rco name=27428.m000110;gene=27428.t000005;note=27428.t000005;transcript=eq;prot=eq + 27428 coding
AT1G24140 ath Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: matrix metalloproteinase (TAIR:AT1G70170.1); Has 2621 Blast hits to 2428 proteins in 195 species: Archae - 3; Bacteria - 89; Metazoa - 2200; Fungi - 4; Plants - 185; Viruses - 42; Other Eukaryotes - 98 (source: NCBI BLink).;Matrixin family protein transcript=eq;prot=eq; - 1 coding
AT1G59970 ath Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: Matrixin family protein (TAIR:AT1G24140.1); Has 2665 Blast hits to 2469 proteins in 210 species: Archae - 2; Bacteria - 119; Metazoa - 2216; Fungi - 6; Plants - 186; Viruses - 42; Other Eukaryotes - 94 (source: NCBI BLink).;Matrixin family protein transcript=eq;prot=eq; + 1 coding
AT1G70170 ath mutant has Late flowering; Early senescence; Matrix Metalloproteinase;matrix metalloproteinase transcript=eq;prot=eq; + 1 coding
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