InterPro domain page  


InterPro id
IPR020083
Description
Ribosomal protein L39e, conserved site
Number of genes
14

InterPro distribution

ath
Arabidopsis thaliana(2 genes)
cre
Chlamydomonas reinhardtii(1 genes)
mrcc299
Micromonas sp. RCC299(1 genes)
olu
Ostreococcus lucimarinus(1 genes)
ppa
Physcomitrella patens(3 genes)
ptr
Populus trichocarpa(2 genes)
rco
Ricinus communis(1 genes)
vvi
Vitis vinifera(3 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:

Page 1 of 1, showing 14 records out of 14 total, starting on record 1, ending on 14

gene_id species description comment strand chr type
CR09G04060 cre name=estExt_gwp_1H.C_250043;pid=130723;prot=eq;tid=130723;transcript=eq + chromosome_9 coding
MRCC299_02G01310 mrcc299 name=EuGene.0200010819;pid=56442;prot=eq;tid=56442;transcript=eq - Chr_02 coding
OL03G03270 olu NULL name=eugene.0300010332,pid=30656,prot=eq,tid=30656 + Chr_3 coding
PP00104G00440 ppa NULL name=estExt_gwp_gw1.C_1040054,pid=187356,prot=eq,tid=187356 - scaffold_104 coding
PP00089G00680 ppa NULL name=estExt_Genewise1.C_890074,pid=213429,prot=eq,tid=213429 - scaffold_89 coding
PP00309G00120 ppa NULL name=fgenesh1_pg.scaffold_309000012,pid=96676,prot=eq,tid=96676 + scaffold_309 coding
PT18G02070 ptr PACid=17549344;name=POPTR_0018s02260;alias=pta000334m,estExt_Genewise1_v1.C_LG_XVIII1780; transcript=eq;prot=eq;protein_id=17549344; - scaffold_18 coding
PT06G25960 ptr PACid=17549686;name=POPTR_0006s27670;alias=pta000354m,grail3.0013044901; transcript=eq;prot=eq;protein_id=17549686; - scaffold_6 coding
RC29737G00330 rco name=29737.m001241;gene=29737.t000035;note=29737.t000035;transcript=eq;prot=eq + 29737 coding
VV11G00180 vvi name=GSVIVG01001055001; transcript=eq;prot=eq;name=GSVIVG01001055001;pid=GSVIVG01001055001;tid=GSVIVT01001055001; - chr11 coding
VV11G00160 vvi name=GSVIVG01001053001; transcript=eq;prot=eq;name=GSVIVG01001053001;pid=GSVIVG01001053001;tid=GSVIVT01001053001; - chr11 coding
VV04G12660 vvi name=GSVIVG01035913001; transcript=eq;prot=eq;name=GSVIVG01035913001;pid=GSVIVG01035913001;tid=GSVIVT01035913001; - chr4 coding
AT2G25210 ath Ribosomal protein L39 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L39e, conserved site (InterPro:IPR020083), Ribosomal protein L39e (InterPro:IPR000077); BEST Arabidopsis thaliana protein match is: Ribosomal protein L39 family protein (TAIR:AT4G31985.1); Has 908 Blast hits to 908 proteins in 288 species: Archae - 195; Bacteria - 0; Metazoa - 389; Fungi - 107; Plants - 121; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).;Ribosomal protein L39 family protein transcript=eq;prot=eq; + 2 coding
AT3G02190 ath Ribosomal protein L39 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L39e, conserved site (InterPro:IPR020083), Ribosomal protein L39e (InterPro:IPR000077); BEST Arabidopsis thaliana protein match is: Ribosomal protein L39 family protein (TAIR:AT4G31985.1); Has 957 Blast hits to 957 proteins in 304 species: Archae - 223; Bacteria - 0; Metazoa - 399; Fungi - 107; Plants - 121; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink).;Ribosomal protein L39 family protein transcript=eq;prot=eq; - 3 coding
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