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InterPro id
IPR016157
Description
Cullin, conserved site
Number of genes
20

InterPro distribution

ath
Arabidopsis thaliana(1 genes)
cre
Chlamydomonas reinhardtii(1 genes)
mrcc299
Micromonas sp. RCC299(1 genes)
olu
Ostreococcus lucimarinus(2 genes)
osa
Oryza sativa ssp. japonica(3 genes)
ota
Ostreococcus tauri(1 genes)
ppa
Physcomitrella patens(2 genes)
ptr
Populus trichocarpa(1 genes)
rco
Ricinus communis(2 genes)
sbi
Sorghum bicolor(4 genes)
vvi
Vitis vinifera(2 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:

Page 1 of 1, showing 20 records out of 20 total, starting on record 1, ending on 20

gene_id species description comment strand chr type
CR17G08070 cre name=e_gwW.18.30.1;pid=116937;prot=eq;tid=116937;transcript=eq + chromosome_17 coding
MRCC299_09G06010 mrcc299 name=e_gw2.09.53.1;pid=84769;prot=eq;tid=84769;transcript=eq - Chr_09 coding
OL04G00430 olu NULL name=estExt_GenewiseEukaryote.C_Chr_40073,pid=45419,prot=eq,tid=45419 + Chr_4 coding
OL03G02820 olu NULL name=e_gwEuk.3.45.1,pid=33783,prot=eq,tid=33783 - Chr_3 coding
OS05G05700 osa cullin, putative, expressed transcript=eq;prot=eq; - 5 coding
OS01G27150 osa cullin, putative, expressed transcript=eq;prot=eq; - 1 coding
OS03G57290 osa cullin, putative, expressed transcript=eq;prot=eq; + 3 coding
OT04G00550 ota putative cullin (ISS); name=OT04G00550;protein_id=CAL51453.1;prot=eq + chrom04 coding
PP00204G00490 ppa NULL name=estExt_gwp_gw1.C_2040064,pid=193769,prot=eq,tid=193769 + scaffold_204 coding
PP00070G00810 ppa NULL name=e_gw1.70.25.1,pid=128517,prot=eq,tid=128517 - scaffold_70 coding
PT08G22020 ptr PACid=17315582;name=POPTR_0008s22590;alias=pt026575m,Pt-CUL1.4,estExt_fgenesh4_pg.C_1320038; transcript=eq;prot=eq;protein_id=17315582; + scaffold_8 coding
RC29726G01310 rco name=29726.m004021;gene=29726.t000133;note=29726.t000133;transcript=eq;prot=eq - 29726 coding
RC55678G00010 rco name=55678.m000030;gene=55678.t000001;note=55678.t000001;transcript=eq;prot=eq + 55678 coding
SB03G015010 sbi 3 prot=eq;pid=5035798;tid=5035798 + chr_3 coding
SB03G015000 sbi 3 prot=eq;pid=5053114;tid=5053114 + chr_3 coding
SB09G003820 sbi 9 prot=eq;pid=5060108;tid=5060108 - chr_9 coding
SB01G005920 sbi 1 prot=eq;pid=5048004;tid=5048004 - chr_1 coding
VV10G04410 vvi name=GSVIVG01021502001; transcript=eq;prot=eq;name=GSVIVG01021502001;pid=GSVIVG01021502001;tid=GSVIVT01021502001; + chr10 coding
VV05G02950 vvi name=GSVIVG01017738001; transcript=eq;prot=eq;name=GSVIVG01017738001;pid=GSVIVG01017738001;tid=GSVIVT01017738001; - chr5 coding
AT5G46210 ath Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.;cullin4 transcript=eq;prot=eq; - 5 coding
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