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InterPro id
IPR013324
Description
RNA polymerase sigma factor, region 3/4
Number of genes
174

InterPro distribution

aly
Arabidopsis lyrata(6 genes)
ath
Arabidopsis thaliana(6 genes)
bdi
Brachypodium distachyon(7 genes)
cpa
Carica papaya(7 genes)
cre
Chlamydomonas reinhardtii(2 genes)
fve
Fragaria vesca(6 genes)
gma
Glycine max(15 genes)
lja
Lotus japonicus(4 genes)
mdo
Malus domestica(11 genes)
mes
Manihot esculenta(9 genes)
mrcc299
Micromonas sp. RCC299(2 genes)
mtr
Medicago truncatula(9 genes)
olu
Ostreococcus lucimarinus(1 genes)
osa
Oryza sativa ssp. japonica(6 genes)
osaindica
Oryza sativa ssp. indica(13 genes)
ota
Ostreococcus tauri(2 genes)
ppa
Physcomitrella patens(9 genes)
ptr
Populus trichocarpa(9 genes)
rco
Ricinus communis(15 genes)
sbi
Sorghum bicolor(6 genes)
smo
Selaginella moellendorffii(5 genes)
tca
Theobroma cacao(5 genes)
vca
Volvox carteri(4 genes)
vvi
Vitis vinifera(6 genes)
zma
Zea mays(9 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:

Page 1 of 9, showing 20 records out of 174 total, starting on record 1, ending on 20

gene_id species description comment strand chr type
AL6G24010 aly name=fgenesh2_kg.6__2403__AT5G24120.1;pid=489269;prot=eq;tid=489269 - scaffold_6 coding
AL1G08200 aly name=fgenesh2_kg.1__869__AT1G08540.1;pid=470915;prot=eq;tid=470915 + scaffold_1 coding
AL2G08710 aly name=scaffold_200883.1;pid=893809;prot=eq;tid=925322 + scaffold_2 coding
AL4G22560 aly name=fgenesh2_kg.4__1742__AT2G36990.1;pid=482682;prot=eq;tid=482682 - scaffold_4 coding
AL5G23950 aly name=Al_scaffold_0005_2291;pid=866812;prot=eq;tid=898325 - scaffold_5 coding
AL6G13430 aly name=scaffold_601382.1;pid=909325;prot=eq;tid=940838 - scaffold_6 coding
CP03807G00010 cpa name=evm.TU.supercontig_3807.1;pid=evm.TU.supercontig_3807.1;prot=eq;warning=only partially equal protein + supercontig_3807 coding
CP00056G00120 cpa name=evm.TU.supercontig_56.12;pid=evm.TU.supercontig_56.12;prot=eq;transcript=eq + supercontig_56 coding
CP00043G01420 cpa name=evm.TU.supercontig_43.142;pid=evm.TU.supercontig_43.142;prot=eq;transcript=eq - supercontig_43 coding
CP00125G00400 cpa name=evm.TU.supercontig_125.40;pid=evm.TU.supercontig_125.40;prot=eq;transcript=eq - supercontig_125 coding
CP00073G00290 cpa name=evm.TU.supercontig_73.29;pid=evm.TU.supercontig_73.29;prot=eq;transcript=eq + supercontig_73 coding
CP00073G00280 cpa name=evm.TU.supercontig_73.28;pid=evm.TU.supercontig_73.28;prot=eq;transcript=eq + supercontig_73 coding
CP00003G00550 cpa name=evm.TU.supercontig_3.55;pid=evm.TU.supercontig_3.55;prot=eq;transcript=eq + supercontig_3 coding
CR03G09640 cre name=estExt_fgenesh2_pg.C_190061;pid=190458;prot=eq;tid=190458;transcript=eq - chromosome_3 coding
CR03G09260 cre name=OVA_fgenesh2_pg.C_scaffold_19000028;pid=206388;prot=eq;tid=206393;transcript=eq + chromosome_3 coding
GM19G36710 gma 19 pid=16314001;transcript=eq;prot=eq;name=Glyma19g36710.1 + Gm19 coding
GM04G41690 gma 04 pid=16257556;transcript=eq;prot=eq;name=Glyma04g41690.1 - Gm04 coding
GM06G13100 gma 06 pid=16262754;transcript=eq;prot=eq;name=Glyma06g13100.1 + Gm06 coding
GM09G35750 gma 09 pid=16277319;transcript=eq;prot=eq;name=Glyma09g35750.1 - Gm09 coding
GM06G00390 gma 06 pid=16261210;transcript=eq;prot=eq;name=Glyma06g00390.1 + Gm06 coding
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