InterPro domain page
- InterPro id
- IPR013084
- Description
- Zinc finger, CCHC retroviral-type
- Number of genes
- 373
InterPro distribution
- aly
- Arabidopsis lyrata(9 genes)
- ath
- Arabidopsis thaliana(9 genes)
- bdi
- Brachypodium distachyon(27 genes)
- cpa
- Carica papaya(6 genes)
- fve
- Fragaria vesca(14 genes)
- gma
- Glycine max(11 genes)
- lja
- Lotus japonicus(59 genes)
- mdo
- Malus domestica(19 genes)
- mes
- Manihot esculenta(10 genes)
- mrcc299
- Micromonas sp. RCC299(6 genes)
- mtr
- Medicago truncatula(23 genes)
- olu
- Ostreococcus lucimarinus(9 genes)
- osa
- Oryza sativa ssp. japonica(15 genes)
- osaindica
- Oryza sativa ssp. indica(50 genes)
- ota
- Ostreococcus tauri(5 genes)
- ppa
- Physcomitrella patens(6 genes)
- ptr
- Populus trichocarpa(10 genes)
- rco
- Ricinus communis(7 genes)
- sbi
- Sorghum bicolor(39 genes)
- smo
- Selaginella moellendorffii(3 genes)
- vca
- Volvox carteri(1 genes)
- vvi
- Vitis vinifera(11 genes)
- zma
- Zea mays(24 genes)
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:
- InterPro domain : IPR013084
Page 1 of 19, showing 20 records out of 373 total, starting on record 1, ending on 20
gene_id | species | description | comment | strand | chr | type |
---|---|---|---|---|---|---|
AL4G11320 | aly | name=Al_scaffold_0004_1101;pid=868938;prot=eq;tid=900451 | + | scaffold_4 | coding | |
AL8G16710 | aly | name=fgenesh2_kg.8__1122__AT5G52380.1;pid=495306;prot=eq;tid=495306 | - | scaffold_8 | coding | |
AL4G00150 | aly | name=fgenesh2_kg.4__14__AT2G21060.1;pid=480954;prot=eq;tid=480954 | - | scaffold_4 | coding | |
AL5G10740 | aly | name=fgenesh1_pm.C_scaffold_5000617;pid=323073;prot=eq;tid=323073 | + | scaffold_5 | coding | |
AL1G41290 | aly | name=Al_scaffold_0001_4060;pid=882293;prot=eq;tid=913806 | + | scaffold_1 | coding | |
AL7G35530 | aly | name=Al_scaffold_0007_3434;pid=859935;prot=eq;tid=891448 | + | scaffold_7 | coding | |
AL7G04740 | aly | name=fgenesh2_kg.7__465__AT4G36020.1;pid=491032;prot=eq;tid=491032 | + | scaffold_7 | coding | |
AL3G38680 | aly | name=fgenesh2_kg.3__3388__AT2G17870.1;pid=480687;prot=eq;tid=480687 | - | scaffold_3 | coding | |
AL5G11100 | aly | name=fgenesh1_pm.C_scaffold_5000635;pid=323091;prot=eq;tid=323091 | + | scaffold_5 | coding | |
CP00006G02550 | cpa | name=evm.TU.supercontig_6.256;pid=evm.TU.supercontig_6.256;prot=eq;transcript=eq | + | supercontig_6 | coding | |
CP00036G00180 | cpa | name=evm.TU.supercontig_36.18;pid=evm.TU.supercontig_36.18;prot=eq;transcript=eq | - | supercontig_36 | coding | |
CP00103G00320 | cpa | name=evm.TU.supercontig_103.32;pid=evm.TU.supercontig_103.32;prot=eq;transcript=eq | - | supercontig_103 | coding | |
CP00107G00570 | cpa | name=evm.TU.supercontig_107.57;pid=evm.TU.supercontig_107.57;prot=eq;transcript=eq | - | supercontig_107 | coding | |
CP00094G00550 | cpa | name=evm.TU.supercontig_94.55;pid=evm.TU.supercontig_94.55;prot=eq;transcript=eq | + | supercontig_94 | coding | |
CP00150G00230 | cpa | name=evm.TU.supercontig_150.23;pid=evm.TU.supercontig_150.23;prot=eq;transcript=eq | + | supercontig_150 | coding | |
GM14G17420 | gma | 14 | pid=16295636;transcript=eq;prot=eq;name=Glyma14g17420.1 | - | Gm14 | coding |
GM15G17820 | gma | 15 | pid=16299141;transcript=eq;prot=eq;name=Glyma15g17820.1 | - | Gm15 | coding |
GM04G32860 | gma | 04 | pid=16256567;transcript=eq;prot=eq;name=Glyma04g32860.1 | + | Gm04 | coding |
GM13G15790 | gma | 13 | pid=16290460;transcript=eq;prot=eq;name=Glyma13g15790.1 | + | Gm13 | coding |
GM20G11270 | gma | 20 | pid=16315848;transcript=eq;prot=eq;name=Glyma20g11270.1 | + | Gm20 | coding |