InterPro domain page 
- InterPro id
- IPR013048
- Description
- Meiotic recombination, Spo11
- Number of genes
- 21
InterPro distribution
- aly
- Arabidopsis lyrata(1 genes)
- ath
- Arabidopsis thaliana(1 genes)
- bdi
- Brachypodium distachyon(1 genes)
- cpa
- Carica papaya(2 genes)
- fve
- Fragaria vesca(3 genes)
- gma
- Glycine max(1 genes)
- lja
- Lotus japonicus(1 genes)
- mes
- Manihot esculenta(1 genes)
- osa
- Oryza sativa ssp. japonica(1 genes)
- ppa
- Physcomitrella patens(1 genes)
- ptr
- Populus trichocarpa(1 genes)
- rco
- Ricinus communis(1 genes)
- sbi
- Sorghum bicolor(2 genes)
- smo
- Selaginella moellendorffii(2 genes)
- tca
- Theobroma cacao(1 genes)
- vvi
- Vitis vinifera(1 genes)
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:
- InterPro domain : IPR013048
Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | type |
|---|---|---|---|---|---|---|
| AL3G13630 | aly | name=Al_scaffold_0003_1340;pid=872699;prot=eq;tid=904212 | - | scaffold_3 | coding | |
| CP02704G00020 | cpa | name=evm.TU.supercontig_2704.2;pid=evm.TU.supercontig_2704.2;prot=eq;transcript=eq | + | supercontig_2704 | coding | |
| CP00012G01630 | cpa | name=evm.TU.supercontig_12.163;pid=evm.TU.supercontig_12.163;prot=eq;transcript=eq | + | supercontig_12 | coding | |
| GM02G46920 | gma | 02 | pid=16250453;transcript=eq;prot=eq;name=Glyma02g46920.1 | - | Gm02 | coding |
| LJ4G018370 | lja | partial;prot=eq;transcript=eq;scaffold=CM0170;name=chr4.CM0170.90.nd | + | chr4 | coding | |
| OS03G54091 | osa | OsTOP6A1 %2D Topoisomerase 6 subunit A homolog 1, expressed | transcript=eq;prot=eq; | + | 3 | coding |
| PP00014G00440 | ppa | NULL | name=e_gw1.14.107.1,pid=115757,prot=eq,tid=115757 | - | scaffold_14 | coding |
| PT01G36780 | ptr | PACid=17329982;name=POPTR_0001s37540;alias=pt039038m,eugene3.00012639; | transcript=eq;prot=eq;protein_id=17329982; | - | scaffold_1 | coding |
| RC29629G00410 | rco | name=29629.m001391;gene=29629.t000042;note=29629.t000042;transcript=eq;prot=eq | + | 29629 | coding | |
| SB07G003800 | sbi | 7 | prot=eq;pid=5043082;tid=5043082 | - | chr_7 | coding |
| SB01G007840 | sbi | 1 | prot=eq;pid=5048125;tid=5048125 | - | chr_1 | coding |
| SM00051G01240 | smo | proteinId=115310;transcriptId=115310;name=e_gw1.51.375.1;transcript=eq;prot=eq | + | scaffold_51 | coding | |
| SM00071G00070 | smo | proteinId=123469;transcriptId=123469;name=e_gw1.71.193.1;transcript=eq;prot=eq | + | scaffold_71 | coding | |
| VV02G03690 | vvi | name=GSVIVG01019418001; | transcript=eq;prot=eq;name=GSVIVG01019418001;pid=GSVIVG01019418001;tid=GSVIVT01019418001; | - | chr2 | coding |
| AT3G13170 | ath | Encodes AtSPO11-1, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. AtSPO11-1 accumulates in foci in early G2. At 1 h post-S phase, no foci are observed, but by 3 h a majority (80%) of meiocytes at this time point contain >50 foci. However, by 5 h, AtSPO11-1 foci are no longer detectable. This suggests that the protein undergoes a rapid cycle of accumulation and disappearance in meiocytes over a period of between 1 and 5 h post-S phase.;Spo11/DNA topoisomerase VI, subunit A protein | transcript=eq;prot=eq; | - | 3 | coding |
| BD1G08390 | bdi | ATP binding (Blast2GO) | pid=Bradi1g08390.1;tid=Bradi1g08390.1;GeneName=Bradi1g08390;transcript=eq;prot=eq | - | Bd1 | coding |
| FV1G04190 | fve | DNA topoisomerase 6 subunit A (AtTOP6A) (probable) | transcript=eq;prot=eq;pid=gene30790 | + | LG1 | coding |
| FV3G04740 | fve | DNA topoisomerase 6 subunit A (AtTOP6A) (probable) | transcript=eq;prot=eq;pid=gene30554 | - | LG3 | coding |
| FV7G28810 | fve | DNA topoisomerase 6 subunit A (AtTOP6A) (probable) | transcript=eq;prot=eq;pid=gene20905 | + | LG7 | coding |
| ME03332G00650 | mes | PACid=17967472;RNAname=cassava4.1_027510m;GeneName=cassava4.1_027510m.g;transcript=eq;prot=eq | - | scaffold03332 | coding |