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InterPro id
IPR013048
Description
Meiotic recombination, Spo11
Number of genes
21

InterPro distribution

aly
Arabidopsis lyrata(1 genes)
ath
Arabidopsis thaliana(1 genes)
bdi
Brachypodium distachyon(1 genes)
cpa
Carica papaya(2 genes)
fve
Fragaria vesca(3 genes)
gma
Glycine max(1 genes)
lja
Lotus japonicus(1 genes)
mes
Manihot esculenta(1 genes)
osa
Oryza sativa ssp. japonica(1 genes)
ppa
Physcomitrella patens(1 genes)
ptr
Populus trichocarpa(1 genes)
rco
Ricinus communis(1 genes)
sbi
Sorghum bicolor(2 genes)
smo
Selaginella moellendorffii(2 genes)
tca
Theobroma cacao(1 genes)
vvi
Vitis vinifera(1 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20

gene_id species description comment strand chr type
AL3G13630 aly name=Al_scaffold_0003_1340;pid=872699;prot=eq;tid=904212 - scaffold_3 coding
CP02704G00020 cpa name=evm.TU.supercontig_2704.2;pid=evm.TU.supercontig_2704.2;prot=eq;transcript=eq + supercontig_2704 coding
CP00012G01630 cpa name=evm.TU.supercontig_12.163;pid=evm.TU.supercontig_12.163;prot=eq;transcript=eq + supercontig_12 coding
GM02G46920 gma 02 pid=16250453;transcript=eq;prot=eq;name=Glyma02g46920.1 - Gm02 coding
LJ4G018370 lja partial;prot=eq;transcript=eq;scaffold=CM0170;name=chr4.CM0170.90.nd + chr4 coding
OS03G54091 osa OsTOP6A1 %2D Topoisomerase 6 subunit A homolog 1, expressed transcript=eq;prot=eq; + 3 coding
PP00014G00440 ppa NULL name=e_gw1.14.107.1,pid=115757,prot=eq,tid=115757 - scaffold_14 coding
PT01G36780 ptr PACid=17329982;name=POPTR_0001s37540;alias=pt039038m,eugene3.00012639; transcript=eq;prot=eq;protein_id=17329982; - scaffold_1 coding
RC29629G00410 rco name=29629.m001391;gene=29629.t000042;note=29629.t000042;transcript=eq;prot=eq + 29629 coding
SB07G003800 sbi 7 prot=eq;pid=5043082;tid=5043082 - chr_7 coding
SB01G007840 sbi 1 prot=eq;pid=5048125;tid=5048125 - chr_1 coding
SM00051G01240 smo proteinId=115310;transcriptId=115310;name=e_gw1.51.375.1;transcript=eq;prot=eq + scaffold_51 coding
SM00071G00070 smo proteinId=123469;transcriptId=123469;name=e_gw1.71.193.1;transcript=eq;prot=eq + scaffold_71 coding
VV02G03690 vvi name=GSVIVG01019418001; transcript=eq;prot=eq;name=GSVIVG01019418001;pid=GSVIVG01019418001;tid=GSVIVT01019418001; - chr2 coding
AT3G13170 ath Encodes AtSPO11-1, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. AtSPO11-1 accumulates in foci in early G2. At 1 h post-S phase, no foci are observed, but by 3 h a majority (80%) of meiocytes at this time point contain >50 foci. However, by 5 h, AtSPO11-1 foci are no longer detectable. This suggests that the protein undergoes a rapid cycle of accumulation and disappearance in meiocytes over a period of between 1 and 5 h post-S phase.;Spo11/DNA topoisomerase VI, subunit A protein transcript=eq;prot=eq; - 3 coding
BD1G08390 bdi ATP binding (Blast2GO) pid=Bradi1g08390.1;tid=Bradi1g08390.1;GeneName=Bradi1g08390;transcript=eq;prot=eq - Bd1 coding
FV1G04190 fve DNA topoisomerase 6 subunit A (AtTOP6A) (probable) transcript=eq;prot=eq;pid=gene30790 + LG1 coding
FV3G04740 fve DNA topoisomerase 6 subunit A (AtTOP6A) (probable) transcript=eq;prot=eq;pid=gene30554 - LG3 coding
FV7G28810 fve DNA topoisomerase 6 subunit A (AtTOP6A) (probable) transcript=eq;prot=eq;pid=gene20905 + LG7 coding
ME03332G00650 mes PACid=17967472;RNAname=cassava4.1_027510m;GeneName=cassava4.1_027510m.g;transcript=eq;prot=eq - scaffold03332 coding
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