InterPro domain page 
- InterPro id
- IPR009210
- Description
- Predicted eukaryotic LigT
- Number of genes
- 15
InterPro distribution
- aly
- Arabidopsis lyrata(1 genes)
- ath
- Arabidopsis thaliana(2 genes)
- cre
- Chlamydomonas reinhardtii(1 genes)
- gma
- Glycine max(1 genes)
- mdo
- Malus domestica(1 genes)
- mes
- Manihot esculenta(1 genes)
- osa
- Oryza sativa ssp. japonica(1 genes)
- ptr
- Populus trichocarpa(2 genes)
- rco
- Ricinus communis(1 genes)
- sbi
- Sorghum bicolor(1 genes)
- tca
- Theobroma cacao(1 genes)
- vca
- Volvox carteri(1 genes)
- zma
- Zea mays(1 genes)
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:
- InterPro domain : IPR009210
Page 1 of 1, showing 15 records out of 15 total, starting on record 1, ending on 15
| gene_id | species | description | comment | strand | chr | type |
|---|---|---|---|---|---|---|
| AL3G17250 | aly | name=fgenesh1_pg.C_scaffold_3001512;pid=341749;prot=eq;tid=341749 | + | scaffold_3 | coding | |
| CR01G01650 | cre | name=au.g1131_t1;pid=282592;prot=eq;tid=282599;transcript=eq | - | chromosome_1 | coding | |
| GM15G02100 | gma | 15 | pid=16297337;transcript=eq;prot=eq;name=Glyma15g02100.1 | - | Gm15 | coding |
| MD00G390940 | mdo | transcript=eq;prot=eq;pid=MDP0000949412;tid=MDP0000949412;contig=MDC017714.153 | - | MDC017714.153 | coding | |
| OS01G13100 | osa | KH domain containing protein, putative, expressed | transcript=eq;prot=eq; | + | 1 | coding |
| PT01G18530 | ptr | PACid=17344323;name=POPTR_0001s18720;alias=pt038600m; | transcript=eq;prot=eq;protein_id=17344323; | + | scaffold_1 | coding |
| PT03G03990 | ptr | PACid=17311991;name=POPTR_0003s04940;alias=pt023683m; | transcript=eq;prot=eq;protein_id=17311991; | - | scaffold_3 | coding |
| RC30146G01200 | rco | name=30146.m003543;gene=30146.t000120;note=30146.t000120;transcript=eq;prot=eq | - | 30146 | coding | |
| SB03G000800 | sbi | 3 | prot=eq;pid=5052360;tid=5052360 | - | chr_3 | coding |
| VC00050G00980 | vca | name=fgenesh4_pg.C_scaffold_50000098;pid=96252;prot=eq;tid=96252 | + | scaffold_50 | coding | |
| AT3G16220 | ath | Predicted eukaryotic LigT; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Predicted eukaryotic LigT (InterPro:IPR009210), Protein kinase A anchor protein, nuclear localisation signal domain (InterPro:IPR019510); BEST Arabidopsis thaliana protein match is: Predicted eukaryotic LigT (TAIR:AT3G16230.3); Has 246 Blast hits to 244 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 165; Fungi - 11; Plants - 39; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).;Predicted eukaryotic LigT | transcript=eq;prot=eq; | + | 3 | coding |
| AT3G16230 | ath | Predicted eukaryotic LigT; FUNCTIONS IN: RNA binding, catalytic activity; INVOLVED IN: RNA metabolic process, regulation of transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088), Predicted eukaryotic LigT (InterPro:IPR009210), RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097), Protein kinase A anchor protein, nuclear localisation signal domain (InterPro:IPR019510); BEST Arabidopsis thaliana protein match is: Predicted eukaryotic LigT (TAIR:AT3G16220.1).;Predicted eukaryotic LigT | transcript=eq;prot=eq; | + | 3 | coding |
| ME07351G00450 | mes | PACid=17984117;RNAname=cassava4.1_006017m;GeneName=cassava4.1_006017m.g;transcript=eq;prot=eq | - | scaffold07351 | coding | |
| TC06G008000 | tca | RNAname=Tc06_t008000;GeneName=Tc06_g008000;transcript=eq;prot=eq | - | Tc06 | coding | |
| ZM03G00540 | zma | name=GRMZM2G093104;tid=GRMZM2G093104_T01;pid=GRMZM2G093104_P01;transcript=eq;prot=eq; | - | 3 | coding |
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