InterPro domain page  


InterPro id
IPR008918
Description
Helix-hairpin-helix motif, class 2
Number of genes
134

InterPro distribution

aly
Arabidopsis lyrata(6 genes)
ath
Arabidopsis thaliana(6 genes)
bdi
Brachypodium distachyon(6 genes)
cpa
Carica papaya(4 genes)
cre
Chlamydomonas reinhardtii(1 genes)
fve
Fragaria vesca(7 genes)
gma
Glycine max(8 genes)
lja
Lotus japonicus(3 genes)
mdo
Malus domestica(9 genes)
mes
Manihot esculenta(4 genes)
mrcc299
Micromonas sp. RCC299(4 genes)
mtr
Medicago truncatula(3 genes)
olu
Ostreococcus lucimarinus(4 genes)
osa
Oryza sativa ssp. japonica(6 genes)
osaindica
Oryza sativa ssp. indica(6 genes)
ota
Ostreococcus tauri(4 genes)
ppa
Physcomitrella patens(11 genes)
ptr
Populus trichocarpa(5 genes)
rco
Ricinus communis(6 genes)
sbi
Sorghum bicolor(5 genes)
smo
Selaginella moellendorffii(6 genes)
tca
Theobroma cacao(6 genes)
vca
Volvox carteri(4 genes)
vvi
Vitis vinifera(5 genes)
zma
Zea mays(5 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
This page uses the Flash plugin.

Toolbox


Index of genes with 1 constraints:

Page 1 of 7, showing 20 records out of 134 total, starting on record 1, ending on 20

gene_id species description comment strand chr type
AL1G30550 aly name=fgenesh2_kg.1__3122__AT1G29630.2;pid=473168;prot=eq;tid=473168 + scaffold_1 coding
AL1G00420 aly name=fgenesh1_pm.C_scaffold_1000036;pid=311256;prot=eq;tid=311256 + scaffold_1 coding
AL1G19010 aly name=scaffold_102016.1;pid=889222;prot=eq;tid=920735 + scaffold_1 coding
AL6G26810 aly name=fgenesh2_kg.6__2627__AT5G26680.1;pid=489493;prot=eq;tid=489493 - scaffold_6 coding
AL5G21780 aly name=fgenesh2_kg.5__1553__AT3G52050.3;pid=485561;prot=eq;tid=485561 + scaffold_5 coding
AL5G07230 aly name=Al_scaffold_0005_687;pid=865208;prot=eq;tid=896721 + scaffold_5 coding
CP00048G02280 cpa name=evm.TU.supercontig_48.228;pid=evm.TU.supercontig_48.228;prot=eq;transcript=eq + supercontig_48 coding
CP00003G04300 cpa name=evm.TU.supercontig_3.430;pid=evm.TU.supercontig_3.430;prot=eq;transcript=eq + supercontig_3 coding
CP00017G01480 cpa name=evm.TU.supercontig_17.148;pid=evm.TU.supercontig_17.148;prot=eq;transcript=eq - supercontig_17 coding
CP00009G03460 cpa name=evm.TU.supercontig_9.346;pid=evm.TU.supercontig_9.346;prot=eq;transcript=eq - supercontig_9 coding
CR01G12360 cre name=estExt_gwp_1H.C_270078;pid=130834;prot=eq;tid=130834;transcript=eq + chromosome_1 coding
GM20G22190 gma 20 pid=16316410;transcript=eq;prot=eq;name=Glyma20g22190.1 - Gm20 coding
GM10G28200 gma 10 pid=16280186;transcript=eq;prot=eq;name=Glyma10g28200.1 - Gm10 coding
GM02G15470 gma 02 pid=16248167;transcript=eq;prot=eq;name=Glyma02g15470.1 - Gm02 coding
GM09G39990 gma 09 pid=16277820;transcript=eq;prot=eq;name=Glyma09g39990.1 + Gm09 coding
GM07G33020 gma 07 pid=16268557;transcript=eq;prot=eq;name=Glyma07g33020.1 + Gm07 coding
GM05G29660 gma 05 pid=16260079;transcript=eq;prot=eq;name=Glyma05g29660.1 - Gm05 coding
GM08G12770 gma 08 pid=16270925;transcript=eq;prot=eq;name=Glyma08g12770.1 - Gm08 coding
GM01G16370 gma 01 pid=16244057;transcript=eq;prot=eq;name=Glyma01g16370.1 + Gm01 coding
LJ4G029190 lja prot=eq;transcript=eq;scaffold=CM0046;name=chr4.CM0046.680.nc - chr4 coding
<< previous
1 | 2 | 3 | 4 | 5 | 6 | 7 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
type