InterPro domain page
- InterPro id
- IPR007527
- Description
- Zinc finger, SWIM-type
- Number of genes
- 1010
InterPro distribution
- aly
- Arabidopsis lyrata(7 genes)
- ath
- Arabidopsis thaliana(20 genes)
- bdi
- Brachypodium distachyon(75 genes)
- cpa
- Carica papaya(31 genes)
- cre
- Chlamydomonas reinhardtii(6 genes)
- fve
- Fragaria vesca(109 genes)
- gma
- Glycine max(73 genes)
- lja
- Lotus japonicus(11 genes)
- mdo
- Malus domestica(101 genes)
- mes
- Manihot esculenta(25 genes)
- mrcc299
- Micromonas sp. RCC299(3 genes)
- mtr
- Medicago truncatula(60 genes)
- olu
- Ostreococcus lucimarinus(2 genes)
- osa
- Oryza sativa ssp. japonica(13 genes)
- osaindica
- Oryza sativa ssp. indica(189 genes)
- ota
- Ostreococcus tauri(3 genes)
- ppa
- Physcomitrella patens(5 genes)
- ptr
- Populus trichocarpa(48 genes)
- rco
- Ricinus communis(10 genes)
- sbi
- Sorghum bicolor(152 genes)
- smo
- Selaginella moellendorffii(5 genes)
- tca
- Theobroma cacao(17 genes)
- vca
- Volvox carteri(4 genes)
- vvi
- Vitis vinifera(20 genes)
- zma
- Zea mays(21 genes)
Tandem/block/both gene duplicate percentage within InterPro domain :
This page uses the Flash plugin.
Toolbox
Index of genes with 1 constraints:
- InterPro domain : IPR007527
Page 1 of 51, showing 20 records out of 1010 total, starting on record 1, ending on 20
gene_id | species | description | comment | strand | chr | type |
---|---|---|---|---|---|---|
AL2G05480 | aly | name=Al_scaffold_0002_491;pid=875897;prot=eq;tid=907410 | + | scaffold_2 | coding | |
AL1G05710 | aly | name=scaffold_100611.1;pid=887817;prot=eq;tid=919330 | + | scaffold_1 | coding | |
AL6G11430 | aly | name=fgenesh1_pg.C_scaffold_6000950;pid=350357;prot=eq;tid=350357 | - | scaffold_6 | coding | |
AL7G30600 | aly | name=fgenesh1_pm.C_scaffold_7002346;pid=330119;prot=eq;tid=330119 | + | scaffold_7 | coding | |
AL2G11160 | aly | name=Al_scaffold_0002_1005;pid=876411;prot=eq;tid=907924 | - | scaffold_2 | coding | |
AL3G33050 | aly | name=fgenesh2_kg.3__3001__AT1G42570.1;pid=480300;prot=eq;tid=480300 | + | scaffold_3 | coding | |
AL1G09790 | aly | name=scaffold_101047.1;pid=888253;prot=eq;tid=919766 | - | scaffold_1 | coding | |
CP00084G00880 | cpa | name=evm.TU.supercontig_84.88;pid=evm.TU.supercontig_84.88;prot=eq;transcript=eq | - | supercontig_84 | coding | |
CP37477G00010 | cpa | name=evm.TU.contig_37477.1;pid=evm.TU.contig_37477.1;prot=eq;transcript=eq | - | contig_37477 | coding | |
CP00016G00530 | cpa | name=evm.TU.supercontig_16.53;pid=evm.TU.supercontig_16.53;prot=eq;transcript=eq | - | supercontig_16 | coding | |
CP00167G00130 | cpa | name=evm.TU.supercontig_167.13;pid=evm.TU.supercontig_167.13;prot=eq;transcript=eq | + | supercontig_167 | coding | |
CP00078G00040 | cpa | name=evm.TU.supercontig_78.4;pid=evm.TU.supercontig_78.4;prot=eq;transcript=eq | + | supercontig_78 | coding | |
CP00167G00170 | cpa | name=evm.TU.supercontig_167.17;pid=evm.TU.supercontig_167.17;prot=eq;transcript=eq | - | supercontig_167 | coding | |
CP00008G02770 | cpa | name=evm.TU.supercontig_8.278;pid=evm.TU.supercontig_8.278;prot=eq;transcript=eq | - | supercontig_8 | coding | |
CP00008G02790 | cpa | name=evm.TU.supercontig_8.280;pid=evm.TU.supercontig_8.280;prot=eq;transcript=eq | - | supercontig_8 | coding | |
CP00167G00150 | cpa | name=evm.TU.supercontig_167.15;pid=evm.TU.supercontig_167.15;prot=eq;transcript=eq | + | supercontig_167 | coding | |
CP00048G02190 | cpa | name=evm.TU.supercontig_48.219;pid=evm.TU.supercontig_48.219;prot=eq;transcript=eq | - | supercontig_48 | coding | |
CP00277G00140 | cpa | name=evm.TU.supercontig_277.14;pid=evm.TU.supercontig_277.14;prot=eq;transcript=eq | - | supercontig_277 | coding | |
CP35242G00010 | cpa | name=evm.TU.contig_35242.1;pid=evm.TU.contig_35242.1;prot=eq;transcript=eq | - | contig_35242 | coding | |
CP00146G00200 | cpa | name=evm.TU.supercontig_146.20;pid=evm.TU.supercontig_146.20;prot=eq;transcript=eq | + | supercontig_146 | coding |