InterPro domain page  


InterPro id
IPR007081
Description
RNA polymerase Rpb1, domain 5
Number of genes
214

InterPro distribution

aly
Arabidopsis lyrata(6 genes)
ath
Arabidopsis thaliana(6 genes)
bdi
Brachypodium distachyon(9 genes)
cpa
Carica papaya(7 genes)
cre
Chlamydomonas reinhardtii(4 genes)
fve
Fragaria vesca(9 genes)
gma
Glycine max(10 genes)
lja
Lotus japonicus(17 genes)
mdo
Malus domestica(18 genes)
mes
Manihot esculenta(6 genes)
mrcc299
Micromonas sp. RCC299(4 genes)
mtr
Medicago truncatula(13 genes)
olu
Ostreococcus lucimarinus(3 genes)
osa
Oryza sativa ssp. japonica(6 genes)
osaindica
Oryza sativa ssp. indica(8 genes)
ota
Ostreococcus tauri(5 genes)
ppa
Physcomitrella patens(21 genes)
ptr
Populus trichocarpa(7 genes)
rco
Ricinus communis(9 genes)
sbi
Sorghum bicolor(9 genes)
smo
Selaginella moellendorffii(7 genes)
tca
Theobroma cacao(7 genes)
vca
Volvox carteri(5 genes)
vvi
Vitis vinifera(9 genes)
zma
Zea mays(9 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
This page uses the Flash plugin.

Toolbox


Index of genes with 1 constraints:

Page 1 of 11, showing 20 records out of 214 total, starting on record 1, ending on 20

gene_id species description comment strand chr type
AL2G10280 aly name=scaffold_201046.1;pid=893972;prot=eq;tid=925485 + scaffold_2 coding
AL8G26240 aly name=fgenesh2_kg.8__1958__AT5G60040.1;pid=496142;prot=eq;tid=496142 + scaffold_8 coding
AL4G26710 aly name=fgenesh2_kg.4__2102__AT2G40030.1;pid=483042;prot=eq;tid=483042 + scaffold_4 coding
AL5G28150 aly name=fgenesh2_kg.5__2208__AT3G57660.1;pid=486216;prot=eq;tid=486216 + scaffold_5 coding
AL7G04990 aly name=fgenesh2_kg.7__493__AT4G35800.1;pid=491060;prot=eq;tid=491060 + scaffold_7 coding
AL2G02340 aly name=scaffold_200244.1;pid=893170;prot=eq;tid=924683 + scaffold_2 coding
CP00007G02090 cpa name=evm.TU.supercontig_7.209;pid=evm.TU.supercontig_7.209;prot=eq;transcript=eq - supercontig_7 coding
CP00007G02070 cpa name=evm.TU.supercontig_7.207;pid=evm.TU.supercontig_7.207;prot=eq;transcript=eq - supercontig_7 coding
CPCG00180 cpa rpoC2;RNA polymerase beta'' chain;protein_id=ABY86772.1; transl_table=11; - chloroplast coding
CP00271G00020 cpa name=evm.TU.supercontig_271.2;pid=evm.TU.supercontig_271.2;prot=eq;transcript=eq + supercontig_271 coding
CP00092G00060 cpa name=evm.TU.supercontig_92.6;pid=evm.TU.supercontig_92.6;prot=eq;transcript=eq - supercontig_92 coding
CP00006G03090 cpa name=evm.TU.supercontig_6.310;pid=evm.TU.supercontig_6.310;prot=eq;transcript=eq + supercontig_6 coding
CP00092G00050 cpa name=evm.TU.supercontig_92.5;pid=evm.TU.supercontig_92.5;prot=eq;transcript=eq - supercontig_92 coding
CR16G06900 cre name=SKA_Chlre2_kg.scaffold_14000132;pid=196948;prot=eq;tid=196953;transcript=eq + chromosome_16 coding
CRCG00680 cre rpoC2;RNA polymerase beta' subunit;protein_id=DAA00948.1; atypical; putative;transl_table=11; + chloroplast coding
CR12G09660 cre name=fgenesh2_pg.C_scaffold_31000007;pid=176094;prot=eq;tid=176094;transcript=eq - chromosome_12 coding
CR03G03730 cre name=au.g10467_t1;pid=292592;prot=eq;tid=292599;transcript=eq - chromosome_3 coding
GM01G36700 gma 01 pid=16245390;transcript=eq;prot=eq;name=Glyma01g36700.1 - Gm01 coding
GM13G26690 gma 13 pid=16291668;transcript=eq;prot=eq;name=Glyma13g26690.1 + Gm13 coding
GM10G12530 gma 10 pid=16279348;transcript=eq;prot=eq;name=Glyma10g12530.1 - Gm10 coding
<< previous
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
type