InterPro domain page  


InterPro id
IPR005712
Description
Ribosomal protein S5, bacterial-type
Number of genes
21

InterPro distribution

aly
Arabidopsis lyrata(2 genes)
ath
Arabidopsis thaliana(1 genes)
bdi
Brachypodium distachyon(1 genes)
cpa
Carica papaya(1 genes)
fve
Fragaria vesca(1 genes)
gma
Glycine max(2 genes)
mdo
Malus domestica(1 genes)
mes
Manihot esculenta(1 genes)
mrcc299
Micromonas sp. RCC299(1 genes)
olu
Ostreococcus lucimarinus(2 genes)
osa
Oryza sativa ssp. japonica(1 genes)
osaindica
Oryza sativa ssp. indica(1 genes)
ptr
Populus trichocarpa(2 genes)
rco
Ricinus communis(1 genes)
sbi
Sorghum bicolor(1 genes)
tca
Theobroma cacao(1 genes)
zma
Zea mays(1 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20

gene_id species description comment strand chr type
AL4G19120 aly name=fgenesh2_kg.4__1392__AT2G33800.1;pid=482332;prot=eq;tid=482332 - scaffold_4 coding
AL4G01450 aly name=fgenesh1_pg.C_scaffold_4000116;pid=343774;prot=eq;tid=343774 + scaffold_4 coding
CP00464G00040 cpa name=evm.TU.supercontig_464.4;pid=evm.TU.supercontig_464.4;prot=eq;transcript=eq + supercontig_464 coding
GM13G24640 gma 13 pid=16291439;transcript=eq;prot=eq;name=Glyma13g24640.1 + Gm13 coding
GM07G31830 gma 07 pid=16268425;transcript=eq;prot=eq;name=Glyma07g31830.1 - Gm07 coding
MD05G004580 mdo transcript=eq;prot=eq;pid=MDP0000266765;tid=MDP0000266765;contig=MDC000200.359 - 5 coding
MRCC299_16G00720 mrcc299 name=estExt_Genewise2.C_Chr_160107;pid=92603;prot=eq;tid=92603;transcript=eq - Chr_16 coding
OL14G01560 olu NULL name=fgenesh1_pg.C_Chr_14000123,pid=18077,prot=eq,tid=18077 - Chr_14 coding
OL14G00900 olu NULL name=fgenesh1_pm.C_Chr_14000019,pid=13247,prot=eq,tid=13247 - Chr_14 coding
OSINDICA_03G32560 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC007125; - Chr03 coding
OS03G34040 osa ribosomal protein, putative, expressed transcript=eq;prot=eq; - 3 coding
PT04G04360 ptr PACid=17303512;name=POPTR_0004s04550;alias=pt006894m; transcript=eq;prot=eq;protein_id=17303512; - scaffold_4 coding
PT11G05180 ptr PACid=17322074;name=POPTR_0011s05370;alias=pt014376m; transcript=eq;prot=eq;protein_id=17322074; - scaffold_11 coding
RC30190G00390 rco name=30190.m010917;gene=30190.t000153;note=30190.t000153;transcript=eq;prot=eq + 30190 coding
SB01G016780 sbi 1 prot=eq;pid=5048611;tid=5048611 - chr_1 coding
AT2G33800 ath Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cadmium ion, response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5, bacterial-type (InterPro:IPR005712), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G64880.1); Has 8967 Blast hits to 8967 proteins in 2880 species: Archae - 262; Bacteria - 5121; Metazoa - 552; Fungi - 265; Plants - 165; Viruses - 0; Other Eukaryotes - 2602 (source: NCBI BLink).;Ribosomal protein S5 family protein transcript=eq;prot=eq; - 2 coding
BD2G06080 bdi fibroblast growth factor 3 binding, fibroblast growth factor 1 binding (Blast2GO) pid=Bradi2g06080.1;tid=Bradi2g06080.1;GeneName=Bradi2g06080;transcript=eq;prot=eq - Bd2 coding
FV3G15550 fve 30S ribosomal protein S5, chloroplastic, Precursor (similar to) transcript=eq;prot=eq;pid=gene02372 + LG3 coding
ME07007G00040 mes PACid=17970630;RNAname=cassava4.1_012516m;GeneName=cassava4.1_012516m.g;transcript=eq;prot=eq + scaffold07007 coding
TC06G015600 tca RNAname=Tc06_t015600;GeneName=Tc06_g015600;transcript=eq;prot=eq + Tc06 coding
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