InterPro domain page  


InterPro id
IPR005162
Description
Retrotransposon gag protein
Number of genes
857

InterPro distribution

aly
Arabidopsis lyrata(2 genes)
ath
Arabidopsis thaliana(5 genes)
bdi
Brachypodium distachyon(20 genes)
cpa
Carica papaya(27 genes)
cre
Chlamydomonas reinhardtii(6 genes)
fve
Fragaria vesca(60 genes)
gma
Glycine max(99 genes)
lja
Lotus japonicus(2 genes)
mdo
Malus domestica(16 genes)
mes
Manihot esculenta(16 genes)
mtr
Medicago truncatula(22 genes)
osa
Oryza sativa ssp. japonica(96 genes)
osaindica
Oryza sativa ssp. indica(363 genes)
ptr
Populus trichocarpa(37 genes)
rco
Ricinus communis(28 genes)
sbi
Sorghum bicolor(38 genes)
smo
Selaginella moellendorffii(6 genes)
vca
Volvox carteri(9 genes)
vvi
Vitis vinifera(2 genes)
zma
Zea mays(3 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:

Page 1 of 43, showing 20 records out of 857 total, starting on record 1, ending on 20

gene_id species description comment strand chr type
AL8G08490 aly name=scaffold_800881.1;pid=917481;prot=eq;tid=948994 + scaffold_8 coding
AL2G04700 aly name=Al_scaffold_0002_417;pid=875823;prot=eq;tid=907336 + scaffold_2 coding
CP00219G00040 cpa name=evm.TU.supercontig_219.4;pid=evm.TU.supercontig_219.4;prot=eq;transcript=eq + supercontig_219 coding
CP00121G00170 cpa name=evm.TU.supercontig_121.17;pid=evm.TU.supercontig_121.17;prot=eq;transcript=eq - supercontig_121 coding
CP00006G04040 cpa name=evm.TU.supercontig_6.405;pid=evm.TU.supercontig_6.405;prot=eq;transcript=eq + supercontig_6 coding
CP00022G00700 cpa name=evm.TU.supercontig_22.70;pid=evm.TU.supercontig_22.70;prot=eq;transcript=eq + supercontig_22 coding
CP01228G00020 cpa name=evm.TU.supercontig_1228.2;pid=evm.TU.supercontig_1228.2;prot=eq;transcript=eq + supercontig_1228 coding
CP00227G00100 cpa name=evm.TU.supercontig_227.10;pid=evm.TU.supercontig_227.10;prot=eq;transcript=eq - supercontig_227 coding
CP00810G00010 cpa name=evm.TU.supercontig_810.1;pid=evm.TU.supercontig_810.1;prot=eq;transcript=eq + supercontig_810 coding
CP00301G00020 cpa name=evm.TU.supercontig_301.2;pid=evm.TU.supercontig_301.2;prot=eq;transcript=eq + supercontig_301 coding
CP00209G00450 cpa name=evm.TU.supercontig_209.45;pid=evm.TU.supercontig_209.45;prot=eq;transcript=eq + supercontig_209 coding
CP00086G00420 cpa name=evm.TU.supercontig_86.42;pid=evm.TU.supercontig_86.42;prot=eq;transcript=eq + supercontig_86 coding
CP00033G00240 cpa name=evm.TU.supercontig_33.24;pid=evm.TU.supercontig_33.24;prot=eq;transcript=eq - supercontig_33 coding
CP00045G00390 cpa name=evm.TU.supercontig_45.39;pid=evm.TU.supercontig_45.39;prot=eq;transcript=eq + supercontig_45 coding
CP00025G00210 cpa name=evm.TU.supercontig_25.21;pid=evm.TU.supercontig_25.21;prot=eq;transcript=eq + supercontig_25 coding
CP00045G00260 cpa name=evm.TU.supercontig_45.26;pid=evm.TU.supercontig_45.26;prot=eq;transcript=eq + supercontig_45 coding
CP40038G00010 cpa name=evm.TU.contig_40038.1;pid=evm.TU.contig_40038.1;prot=eq;transcript=eq + contig_40038 coding
CP00041G00270 cpa name=evm.TU.supercontig_41.27;pid=evm.TU.supercontig_41.27;prot=eq;transcript=eq + supercontig_41 coding
CP00089G00220 cpa name=evm.TU.supercontig_89.22;pid=evm.TU.supercontig_89.22;prot=eq;transcript=eq + supercontig_89 coding
CP00220G00060 cpa name=evm.TU.supercontig_220.6;pid=evm.TU.supercontig_220.6;prot=eq;transcript=eq + supercontig_220 coding
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