InterPro domain page
- InterPro id
- IPR002121
- Description
- Helicase/RNase D C-terminal, HRDC domain
- Number of genes
- 114
InterPro distribution
- aly
- Arabidopsis lyrata(7 genes)
- ath
- Arabidopsis thaliana(6 genes)
- bdi
- Brachypodium distachyon(7 genes)
- cpa
- Carica papaya(3 genes)
- cre
- Chlamydomonas reinhardtii(4 genes)
- fve
- Fragaria vesca(7 genes)
- gma
- Glycine max(8 genes)
- lja
- Lotus japonicus(4 genes)
- mes
- Manihot esculenta(4 genes)
- mrcc299
- Micromonas sp. RCC299(1 genes)
- mtr
- Medicago truncatula(4 genes)
- osa
- Oryza sativa ssp. japonica(6 genes)
- osaindica
- Oryza sativa ssp. indica(9 genes)
- ota
- Ostreococcus tauri(2 genes)
- ppa
- Physcomitrella patens(4 genes)
- ptr
- Populus trichocarpa(5 genes)
- rco
- Ricinus communis(5 genes)
- sbi
- Sorghum bicolor(8 genes)
- smo
- Selaginella moellendorffii(5 genes)
- tca
- Theobroma cacao(4 genes)
- vca
- Volvox carteri(2 genes)
- vvi
- Vitis vinifera(5 genes)
- zma
- Zea mays(4 genes)
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:
- InterPro domain : IPR002121
Page 1 of 6, showing 20 records out of 114 total, starting on record 1, ending on 20
gene_id | species | description | comment | strand | chr | type |
---|---|---|---|---|---|---|
AL7G32880 | aly | name=fgenesh1_pg.C_scaffold_7002750;pid=355577;prot=eq;tid=355577 | - | scaffold_7 | coding | |
AL2G05030 | aly | name=Al_scaffold_0002_448;pid=875854;prot=eq;tid=907367 | + | scaffold_2 | coding | |
AL7G09910 | aly | name=scaffold_701042.1;pid=913300;prot=eq;tid=944813 | + | scaffold_7 | coding | |
AL1G51420 | aly | name=fgenesh1_pg.C_scaffold_1004299;pid=337734;prot=eq;tid=337734 | + | scaffold_1 | coding | |
AL1G11090 | aly | name=fgenesh2_kg.1__1185__AT1G10930.1;pid=471231;prot=eq;tid=471231 | - | scaffold_1 | coding | |
AL1G36580 | aly | name=scaffold_103920.1;pid=891126;prot=eq;tid=922639 | - | scaffold_1 | coding | |
AL4G17470 | aly | name=fgenesh1_pm.C_scaffold_4001039;pid=320982;prot=eq;tid=320982 | - | scaffold_4 | coding | |
CP00161G00170 | cpa | name=evm.TU.supercontig_161.17;pid=evm.TU.supercontig_161.17;prot=eq;transcript=eq | + | supercontig_161 | coding | |
CP00087G00710 | cpa | name=evm.TU.supercontig_87.71;pid=evm.TU.supercontig_87.71;prot=eq;transcript=eq | - | supercontig_87 | coding | |
CP00031G00470 | cpa | name=evm.TU.supercontig_31.47;pid=evm.TU.supercontig_31.47;prot=eq;transcript=eq | - | supercontig_31 | coding | |
CR12G05910 | cre | name=au.g3315_t1;pid=284930;prot=eq;tid=284937;transcript=eq | + | chromosome_12 | coding | |
CR12G01480 | cre | name=au.g2881_t1;pid=284462;prot=eq;tid=284469;transcript=eq | + | chromosome_12 | coding | |
CR01G00890 | cre | name=kg.chromosome_1_#_118_#_880012:1;pid=298393;prot=eq;tid=298400;transcript=eq | + | chromosome_1 | coding | |
CR10G01180 | cre | name=estExt_fgenesh1_pm.C_chromosome_100074;pid=379447;prot=eq;tid=379454;transcript=eq | - | chromosome_10 | coding | |
GM05G13920 | gma | 05 | pid=16258915;transcript=eq;prot=eq;name=Glyma05g13920.1 | - | Gm05 | coding |
GM05G11200 | gma | 05 | pid=16258856;transcript=eq;prot=eq;name=Glyma05g11200.1 | + | Gm05 | coding |
GM12G10530 | gma | 12 | pid=16287089;transcript=eq;prot=eq;name=Glyma12g10530.1 | + | Gm12 | coding |
GM08G20070 | gma | 08 | pid=16271806;transcript=eq;prot=eq;name=Glyma08g20070.1 | - | Gm08 | coding |
GM17G24130 | gma | 17 | pid=16306377;transcript=eq;prot=eq;name=Glyma17g24130.1 | - | Gm17 | coding |
GM09G34860 | gma | 09 | pid=16277211;transcript=eq;prot=eq;name=Glyma09g34860.1 | + | Gm09 | coding |