InterPro domain page  


InterPro id
IPR002121
Description
Helicase/RNase D C-terminal, HRDC domain
Number of genes
114

InterPro distribution

aly
Arabidopsis lyrata(7 genes)
ath
Arabidopsis thaliana(6 genes)
bdi
Brachypodium distachyon(7 genes)
cpa
Carica papaya(3 genes)
cre
Chlamydomonas reinhardtii(4 genes)
fve
Fragaria vesca(7 genes)
gma
Glycine max(8 genes)
lja
Lotus japonicus(4 genes)
mes
Manihot esculenta(4 genes)
mrcc299
Micromonas sp. RCC299(1 genes)
mtr
Medicago truncatula(4 genes)
osa
Oryza sativa ssp. japonica(6 genes)
osaindica
Oryza sativa ssp. indica(9 genes)
ota
Ostreococcus tauri(2 genes)
ppa
Physcomitrella patens(4 genes)
ptr
Populus trichocarpa(5 genes)
rco
Ricinus communis(5 genes)
sbi
Sorghum bicolor(8 genes)
smo
Selaginella moellendorffii(5 genes)
tca
Theobroma cacao(4 genes)
vca
Volvox carteri(2 genes)
vvi
Vitis vinifera(5 genes)
zma
Zea mays(4 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:

Page 1 of 6, showing 20 records out of 114 total, starting on record 1, ending on 20

gene_id species description comment strand chr type
AL7G32880 aly name=fgenesh1_pg.C_scaffold_7002750;pid=355577;prot=eq;tid=355577 - scaffold_7 coding
AL2G05030 aly name=Al_scaffold_0002_448;pid=875854;prot=eq;tid=907367 + scaffold_2 coding
AL7G09910 aly name=scaffold_701042.1;pid=913300;prot=eq;tid=944813 + scaffold_7 coding
AL1G51420 aly name=fgenesh1_pg.C_scaffold_1004299;pid=337734;prot=eq;tid=337734 + scaffold_1 coding
AL1G11090 aly name=fgenesh2_kg.1__1185__AT1G10930.1;pid=471231;prot=eq;tid=471231 - scaffold_1 coding
AL1G36580 aly name=scaffold_103920.1;pid=891126;prot=eq;tid=922639 - scaffold_1 coding
AL4G17470 aly name=fgenesh1_pm.C_scaffold_4001039;pid=320982;prot=eq;tid=320982 - scaffold_4 coding
CP00161G00170 cpa name=evm.TU.supercontig_161.17;pid=evm.TU.supercontig_161.17;prot=eq;transcript=eq + supercontig_161 coding
CP00087G00710 cpa name=evm.TU.supercontig_87.71;pid=evm.TU.supercontig_87.71;prot=eq;transcript=eq - supercontig_87 coding
CP00031G00470 cpa name=evm.TU.supercontig_31.47;pid=evm.TU.supercontig_31.47;prot=eq;transcript=eq - supercontig_31 coding
CR12G05910 cre name=au.g3315_t1;pid=284930;prot=eq;tid=284937;transcript=eq + chromosome_12 coding
CR12G01480 cre name=au.g2881_t1;pid=284462;prot=eq;tid=284469;transcript=eq + chromosome_12 coding
CR01G00890 cre name=kg.chromosome_1_#_118_#_880012:1;pid=298393;prot=eq;tid=298400;transcript=eq + chromosome_1 coding
CR10G01180 cre name=estExt_fgenesh1_pm.C_chromosome_100074;pid=379447;prot=eq;tid=379454;transcript=eq - chromosome_10 coding
GM05G13920 gma 05 pid=16258915;transcript=eq;prot=eq;name=Glyma05g13920.1 - Gm05 coding
GM05G11200 gma 05 pid=16258856;transcript=eq;prot=eq;name=Glyma05g11200.1 + Gm05 coding
GM12G10530 gma 12 pid=16287089;transcript=eq;prot=eq;name=Glyma12g10530.1 + Gm12 coding
GM08G20070 gma 08 pid=16271806;transcript=eq;prot=eq;name=Glyma08g20070.1 - Gm08 coding
GM17G24130 gma 17 pid=16306377;transcript=eq;prot=eq;name=Glyma17g24130.1 - Gm17 coding
GM09G34860 gma 09 pid=16277211;transcript=eq;prot=eq;name=Glyma09g34860.1 + Gm09 coding
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