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InterPro id
IPR002078
Description
RNA polymerase sigma factor 54, interaction
Number of genes
36

InterPro distribution

aly
Arabidopsis lyrata(1 genes)
ath
Arabidopsis thaliana(3 genes)
cre
Chlamydomonas reinhardtii(2 genes)
mrcc299
Micromonas sp. RCC299(1 genes)
olu
Ostreococcus lucimarinus(1 genes)
osaindica
Oryza sativa ssp. indica(6 genes)
ota
Ostreococcus tauri(2 genes)
ppa
Physcomitrella patens(4 genes)
ptr
Populus trichocarpa(2 genes)
rco
Ricinus communis(7 genes)
sbi
Sorghum bicolor(1 genes)
vca
Volvox carteri(2 genes)
vvi
Vitis vinifera(3 genes)
zma
Zea mays(1 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 36 total, starting on record 1, ending on 20

gene_id species description comment strand chr type
AL6G02750 aly name=Al_scaffold_0006_259;pid=860750;prot=eq;tid=892263 - scaffold_6 coding
CR12G05950 cre name=Chlre2_kg.scaffold_11000225;pid=144680;prot=eq;tid=144680;transcript=eq - chromosome_12 coding
CR13G06910 cre name=MEL_e_gwH.38.121.1;pid=195872;prot=eq;tid=195872;transcript=eq - chromosome_13 coding
MRCC299_08G01740 mrcc299 name=gw2.08.11.1;pid=65101;prot=eq;tid=65101;transcript=eq - Chr_08 coding
OL09G01110 olu NULL name=ost_09_005_024,pid=88171,prot=eq,tid=88171 + Chr_9 coding
OSINDICA_00G07230 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC047864; + Scaffold027955 coding
OSINDICA_00G03650 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC048251; - Scaffold011545 coding
OSINDICA_00G08970 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC048940; + Scaffold026082 coding
OSINDICA_00G35860 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC047814; - Scaffold026925 coding
OSINDICA_00G35880 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC047105; - Scaffold016346 coding
OSINDICA_00G29510 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC047356; - Scaffold019137 coding
OT15G01280 ota name=OT15G01280;protein_id=CAL57547.1;prot=eq + chrom15 coding
OT01G04040 ota MDN1, midasin homolog (ISS); name=OT01G04040;protein_id=CAL50315.1;prot=eq + chrom01 coding
PP00134G00470 ppa NULL name=gw1.134.1.1,pid=33,prot=eq,tid=33 + scaffold_134 coding
PP00113G00470 ppa NULL name=estExt_gwp_gw1.C_1130070,pid=187933,prot=eq,tid=187933 - scaffold_113 coding
PP00044G00860 ppa NULL name=estExt_fgenesh1_pm.C_440018,pid=105656,prot=eq,tid=105656 - scaffold_44 coding
PP00218G00430 ppa NULL name=estExt_Genewise1.C_2180059,pid=221760,prot=eq,tid=221760 - scaffold_218 coding
PT05G08520 ptr PACid=17319044;name=POPTR_0005s08710;alias=pt033287m,grail3.0026021501; transcript=eq;prot=eq;protein_id=17319044; - scaffold_5 coding
PT07G06500 ptr PACid=17309278;name=POPTR_0007s06690;alias=pt025576m,estExt_fgenesh4_pm.C_LG_VII0232; transcript=eq;prot=eq;protein_id=17309278; - scaffold_7 coding
RC32670G00010 rco name=32670.m000026;gene=32670.t000001;note=32670.t000001;transcript=eq;prot=eq - 32670 coding
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