InterPro domain page  


InterPro id
IPR001163
Description
Like-Sm ribonucleoprotein (LSM) domain
Number of genes
570

InterPro distribution

aly
Arabidopsis lyrata(27 genes)
ath
Arabidopsis thaliana(26 genes)
bdi
Brachypodium distachyon(22 genes)
cpa
Carica papaya(17 genes)
cre
Chlamydomonas reinhardtii(18 genes)
fve
Fragaria vesca(20 genes)
gma
Glycine max(42 genes)
lja
Lotus japonicus(14 genes)
mdo
Malus domestica(40 genes)
mes
Manihot esculenta(26 genes)
mrcc299
Micromonas sp. RCC299(17 genes)
mtr
Medicago truncatula(25 genes)
olu
Ostreococcus lucimarinus(18 genes)
osa
Oryza sativa ssp. japonica(23 genes)
osaindica
Oryza sativa ssp. indica(20 genes)
ota
Ostreococcus tauri(10 genes)
ppa
Physcomitrella patens(36 genes)
ptr
Populus trichocarpa(27 genes)
rco
Ricinus communis(20 genes)
sbi
Sorghum bicolor(18 genes)
smo
Selaginella moellendorffii(16 genes)
tca
Theobroma cacao(19 genes)
vca
Volvox carteri(16 genes)
vvi
Vitis vinifera(22 genes)
zma
Zea mays(31 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
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Index of genes with 1 constraints:

Page 1 of 29, showing 20 records out of 570 total, starting on record 1, ending on 20

gene_id species description comment strand chr type
AL1G21710 aly name=fgenesh1_pg.C_scaffold_1001871;pid=335306;prot=eq;tid=335306 + scaffold_1 coding
AL1G20070 aly name=fgenesh2_kg.1__2089__AT1G19120.1;pid=472135;prot=eq;tid=472135 + scaffold_1 coding
AL8G05190 aly name=fgenesh2_kg.8__353__AT5G44500.1;pid=494537;prot=eq;tid=494537 - scaffold_8 coding
AL2G12180 aly name=fgenesh1_pm.C_scaffold_2000638;pid=315605;prot=eq;tid=315605 - scaffold_2 coding
AL6G38400 aly name=fgenesh2_kg.6__3408__AT4G02840.1;pid=490274;prot=eq;tid=490274 - scaffold_6 coding
AL3G08040 aly name=Al_scaffold_0003_785;pid=872144;prot=eq;tid=903657 + scaffold_3 coding
AL7G21980 aly name=fgenesh2_kg.7__2248__AT4G20440.3;pid=492815;prot=eq;tid=492815 + scaffold_7 coding
AL4G35850 aly name=fgenesh2_kg.4__3005__AT2G47640.1;pid=483945;prot=eq;tid=483945 + scaffold_4 coding
AL7G11340 aly name=scaffold_701198.1;pid=913456;prot=eq;tid=944969 + scaffold_7 coding
AL2G25220 aly name=fgenesh2_kg.2__1913__AT1G76300.1;pid=476783;prot=eq;tid=476783 + scaffold_2 coding
AL3G41040 aly name=scaffold_304344.1;pid=900374;prot=eq;tid=931887 - scaffold_3 coding
AL3G33900 aly name=scaffold_303615.1;pid=899645;prot=eq;tid=931158 - scaffold_3 coding
AL8G12030 aly name=scaffold_801217.1;pid=917817;prot=eq;tid=949330 + scaffold_8 coding
AL5G03510 aly name=fgenesh2_kg.5__290__AT2G03870.2;pid=484298;prot=eq;tid=484298 + scaffold_5 coding
AL3G11900 aly name=fgenesh2_kg.3__1190__AT3G11500.1;pid=478489;prot=eq;tid=478489 - scaffold_3 coding
AL4G31440 aly name=scaffold_403286.1;pid=903785;prot=eq;tid=935298 + scaffold_4 coding
AL7G11240 aly name=scaffold_701187.1;pid=913445;prot=eq;tid=944958 + scaffold_7 coding
AL5G30350 aly name=fgenesh2_kg.5__2437__AT3G59810.1;pid=486445;prot=eq;tid=486445 + scaffold_5 coding
AL2G25790 aly name=scaffold_202641.1;pid=895567;prot=eq;tid=927080 - scaffold_2 coding
AL6G27510 aly name=fgenesh1_pm.C_scaffold_6002153;pid=326933;prot=eq;tid=326933 - scaffold_6 coding
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