InterPro domain page  


InterPro id
IPR000305
Description
Excinuclease ABC, C subunit, N-terminal
Number of genes
90

InterPro distribution

aly
Arabidopsis lyrata(3 genes)
ath
Arabidopsis thaliana(3 genes)
bdi
Brachypodium distachyon(4 genes)
cpa
Carica papaya(3 genes)
cre
Chlamydomonas reinhardtii(5 genes)
fve
Fragaria vesca(2 genes)
gma
Glycine max(4 genes)
lja
Lotus japonicus(3 genes)
mdo
Malus domestica(4 genes)
mes
Manihot esculenta(3 genes)
mrcc299
Micromonas sp. RCC299(3 genes)
mtr
Medicago truncatula(1 genes)
olu
Ostreococcus lucimarinus(2 genes)
osa
Oryza sativa ssp. japonica(4 genes)
osaindica
Oryza sativa ssp. indica(2 genes)
ota
Ostreococcus tauri(1 genes)
ppa
Physcomitrella patens(5 genes)
ptr
Populus trichocarpa(6 genes)
rco
Ricinus communis(2 genes)
sbi
Sorghum bicolor(3 genes)
smo
Selaginella moellendorffii(2 genes)
tca
Theobroma cacao(4 genes)
vca
Volvox carteri(15 genes)
vvi
Vitis vinifera(3 genes)
zma
Zea mays(3 genes)
 
Tandem/block/both gene duplicate percentage within InterPro domain :
This page uses the Flash plugin.

Toolbox


Index of genes with 1 constraints:

Page 1 of 5, showing 20 records out of 90 total, starting on record 1, ending on 20

gene_id species description comment strand chr type
AL3G27690 aly name=fgenesh2_kg.3__2647__AT3G24320.1;pid=479946;prot=eq;tid=479946 - scaffold_3 coding
AL8G07120 aly name=fgenesh2_kg.8__499__AT5G43210.1;pid=494683;prot=eq;tid=494683 - scaffold_8 coding
AL4G14970 aly name=fgenesh1_pg.C_scaffold_4001140;pid=344798;prot=eq;tid=344798 - scaffold_4 coding
CP00002G03010 cpa name=evm.TU.supercontig_2.301;pid=evm.TU.supercontig_2.301;prot=eq;transcript=eq + supercontig_2 coding
CP00059G00140 cpa name=evm.TU.supercontig_59.14;pid=evm.TU.supercontig_59.14;prot=eq;transcript=eq + supercontig_59 coding
CP00197G00240 cpa name=evm.TU.supercontig_197.24;pid=evm.TU.supercontig_197.24;prot=eq;transcript=eq + supercontig_197 coding
CR09G05510 cre name=pasa_Sanger_mRNA33581;pid=400155;prot=eq;tid=424103;transcript=eq - chromosome_9 coding
CR06G13030 cre name=fgenesh2_pg.C_scaffold_12000026;pid=169967;prot=eq;tid=169967;transcript=eq - chromosome_6 coding
CR01G11270 cre name=pm.chromosome_1_#_648;pid=334736;prot=eq;tid=334743;transcript=eq + chromosome_1 coding
CR07G08150 cre name=pm.chromosome_7_#_363;pid=337704;prot=eq;tid=337711;transcript=eq + chromosome_7 coding
CRMG00110 cre unknown;protein_id=AAC39337.1; orf306; intronic ORF; formerly i3; in frame with the upstream cob exon; no AUG initiation codon; + mitochondrial coding
GM10G26450 gma 10 pid=16280030;transcript=eq;prot=eq;name=Glyma10g26450.1 - Gm10 coding
GM18G06170 gma 18 pid=16308074;transcript=eq;prot=eq;name=Glyma18g06170.1 + Gm18 coding
GM09G36020 gma 09 pid=16277349;transcript=eq;prot=eq;name=Glyma09g36020.1 + Gm09 coding
GM11G30050 gma 11 pid=16284955;transcript=eq;prot=eq;name=Glyma11g30050.1 - Gm11 coding
LJ2G008770 lja partial;prot=eq;transcript=eq;scaffold=CM0373;name=chr2.CM0373.80.nd - chr2 coding
LJ0G089400 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_029306;name=LjSGA_029306.1 - LjSGA_029306 coding
LJ0G351330 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_125412;name=LjSGA_125412.1 - LjSGA_125412 coding
MD00G026360 mdo transcript=eq;prot=eq;pid=MDP0000119480;tid=MDP0000119480;contig=MDC001103.671 + MDC001103.671 coding
MD00G411130 mdo transcript=eq;prot=eq;pid=MDP0000305112;tid=MDP0000305112;contig=MDC018703.50 - MDC018703.50 coding
<< previous
1 | 2 | 3 | 4 | 5 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
type