Selection of genes

Index of genes with 3 constraints:
  • gene family : HOM001312
  • species : ath
  • interpro domain : IPR012337
  • The 'interpro' flag in the table indicates whether or not the gene adheres to all 3 constraints, or just to the top 2 constraints (see phylogenetic profile of the previous page.

    Page 1 of 1, showing 5 records out of 5 total, starting on record 1, ending on 5

    gene_id species description comment strand chr outlier interpro
    AT3G23460 ath S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: lipid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 8129 Blast hits to 5802 proteins in 1165 species: Archae - 0; Bacteria - 4586; Metazoa - 5; Fungi - 83; Plants - 178; Viruses - 0; Other Eukaryotes - 3277 (source: NCBI BLink).;S-adenosyl-L-methionine-dependent methyltransferases superfamily protein transcript=eq;prot=eq; + 3 No false
    AT3G23470 ath Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23480.1); Has 719 Blast hits to 717 proteins in 247 species: Archae - 7; Bacteria - 630; Metazoa - 1; Fungi - 36; Plants - 32; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).;Cyclopropane-fatty-acyl-phospholipid synthase transcript=eq;prot=eq; + 3 No false
    AT3G23480 ath Cyclopropane-fatty-acyl-phospholipid synthase; INVOLVED IN: lipid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23470.1).;Cyclopropane-fatty-acyl-phospholipid synthase transcript=eq;prot=eq; + 3 No false
    AT3G23510 ath Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink).;Cyclopropane-fatty-acyl-phospholipid synthase transcript=eq;prot=eq; + 3 No false
    AT3G23530 ath Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink).;Cyclopropane-fatty-acyl-phospholipid synthase transcript=eq;prot=eq; + 3 No false
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