Selection of genes

Index of genes with 3 constraints:
  • gene family : HOM000602
  • species : ath
  • interpro domain : IPR012337
  • The 'interpro' flag in the table indicates whether or not the gene adheres to all 3 constraints, or just to the top 2 constraints (see phylogenetic profile of the previous page.

    Page 1 of 1, showing 10 records out of 10 total, starting on record 1, ending on 10

    gene_id species description comment strand chr outlier interpro
    AT1G02690 ath Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.;importin alpha isoform 6 transcript=eq;prot=eq; + 1 No false
    AT1G09270 ath Protein interacts with Agrobacterium proteins VirD2 and VirE2.;importin alpha isoform 4 transcript=eq;prot=eq; + 1 No false
    AT1G32880 ath ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 1206 Blast hits to 1169 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 694; Fungi - 159; Plants - 216; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink).;ARM repeat superfamily protein transcript=eq;prot=eq; - 1 No false
    AT3G05720 ath Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.;importin alpha isoform 7 transcript=eq;prot=eq; - 3 No false
    AT3G06720 ath Encodes importin alpha involved in nuclear import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.;importin alpha isoform 1 transcript=eq;prot=eq; + 3 No false
    AT4G02150 ath Encodes IMPORTIN ALPHA 3. Mutant plants act as suppressors of snc1 response and salicylic acid accumulation. Located in the nucleus. Involved in protein import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.;ARM repeat superfamily protein transcript=eq;prot=eq; - 4 No false
    AT4G16143 ath Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.;importin alpha isoform 2 transcript=eq;prot=eq; - 4 No false
    AT5G03070 ath Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.;importin alpha isoform 9 transcript=eq;prot=eq; - 5 No false
    AT5G49310 ath Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.;importin alpha isoform 5 transcript=eq;prot=eq; - 5 No false
    AT5G52000 ath Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.;importin alpha isoform 8 transcript=eq;prot=eq; - 5 No false
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