Selection of genes

Index of genes with 3 constraints:
  • gene family : HOM000544
  • species : ath
  • interpro domain : IPR012337
  • The 'interpro' flag in the table indicates whether or not the gene adheres to all 3 constraints, or just to the top 2 constraints (see phylogenetic profile of the previous page.

    Page 1 of 1, showing 8 records out of 8 total, starting on record 1, ending on 8

    gene_id species description comment strand chr outlier interpro
    AT1G08065 ath alpha carbonic anhydrase 5 (ACA5); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 7 (TAIR:AT1G08080.1); Has 3351 Blast hits to 3338 proteins in 543 species: Archae - 0; Bacteria - 710; Metazoa - 2051; Fungi - 82; Plants - 328; Viruses - 7; Other Eukaryotes - 173 (source: NCBI BLink).;alpha carbonic anhydrase 5 transcript=eq;prot=eq; - 1 No false
    AT1G08080 ath alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink).;alpha carbonic anhydrase 7 transcript=eq;prot=eq; - 1 No false
    AT2G28210 ath alpha carbonic anhydrase 2 (ACA2); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: response to carbon dioxide, one-carbon metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 7 (TAIR:AT1G08080.1); Has 3295 Blast hits to 3278 proteins in 530 species: Archae - 0; Bacteria - 691; Metazoa - 2036; Fungi - 83; Plants - 323; Viruses - 2; Other Eukaryotes - 160 (source: NCBI BLink).;alpha carbonic anhydrase 2 transcript=eq;prot=eq; + 2 No false
    AT3G52720 ath Encodes a putative alpha carbonic anhydrase (CAH1) located in the chloroplast stroma. Most chloroplast proteins are encoded by the nuclear genome and imported with the help of sorting signals that are intrinsic parts of the polypeptides. CAH1 takes an alternative route through the secretory pathway, and becomes N-glycosylated before entering the chloroplast.;alpha carbonic anhydrase 1 transcript=eq;prot=eq; - 3 No false
    AT4G20990 ath alpha carbonic anhydrase 4 (ACA4); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 6 (TAIR:AT4G21000.1); Has 3359 Blast hits to 3345 proteins in 546 species: Archae - 0; Bacteria - 694; Metazoa - 2070; Fungi - 83; Plants - 327; Viruses - 4; Other Eukaryotes - 181 (source: NCBI BLink).;alpha carbonic anhydrase 4 transcript=eq;prot=eq; + 4 No false
    AT4G21000 ath alpha carbonic anhydrase 6 (ACA6); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 4 (TAIR:AT4G20990.1); Has 3246 Blast hits to 3235 proteins in 536 species: Archae - 0; Bacteria - 711; Metazoa - 1969; Fungi - 83; Plants - 321; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink).;alpha carbonic anhydrase 6 transcript=eq;prot=eq; + 4 No false
    AT5G04180 ath alpha carbonic anhydrase 3 (ACA3); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: response to carbon dioxide, one-carbon metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 4 (TAIR:AT4G20990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;alpha carbonic anhydrase 3 transcript=eq;prot=eq; - 5 No false
    AT5G56330 ath alpha carbonic anhydrase 8 (ACA8); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process, cyanate metabolic process; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;alpha carbonic anhydrase 8 transcript=eq;prot=eq; + 5 No false
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