Selection of genes

Index of genes with 3 constraints:
  • gene family : HOM000303
  • species : ath
  • interpro domain : IPR012337
  • The 'interpro' flag in the table indicates whether or not the gene adheres to all 3 constraints, or just to the top 2 constraints (see phylogenetic profile of the previous page.

    Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

    gene_id species description comment strand chr outlier interpro
    AT1G64090 ath Reticulan like protein B3 (RTNLB3); CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 3 (TAIR:AT5G41600.1).;Reticulan like protein B3 transcript=eq;prot=eq; + 1 No false
    AT1G68230 ath Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G46170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Reticulon family protein transcript=eq;prot=eq; + 1 No false
    AT2G01240 ath Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1); Has 375 Blast hits to 375 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Reticulon family protein transcript=eq;prot=eq; - 2 No false
    AT2G15280 ath Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G19460.1); Has 1097 Blast hits to 1097 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 625; Fungi - 2; Plants - 455; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).;Reticulon family protein transcript=eq;prot=eq; + 2 No false
    AT2G23640 ath Reticulan like protein B13 (RTNLB13); CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G10915.3); Has 751 Blast hits to 751 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 0; Plants - 418; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).;Reticulan like protein B13 transcript=eq;prot=eq; + 2 No false
    AT2G46170 ath Reticulon family protein; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 1230 Blast hits to 1228 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 708; Fungi - 7; Plants - 492; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).;Reticulon family protein transcript=eq;prot=eq; + 2 No false
    AT3G10260 ath Reticulon family protein; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 1060 Blast hits to 1060 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 0; Plants - 458; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).;Reticulon family protein transcript=eq;prot=eq; - 3 No false
    AT3G10915 ath Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 685 Blast hits to 685 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 208; Fungi - 2; Plants - 475; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Reticulon family protein transcript=eq;prot=eq; - 3 No false
    AT3G18260 ath Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G10260.2); Has 1034 Blast hits to 1032 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 545; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).;Reticulon family protein transcript=eq;prot=eq; - 3 No false
    AT3G19460 ath Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G15280.1); Has 985 Blast hits to 985 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 550; Fungi - 0; Plants - 426; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).;Reticulon family protein transcript=eq;prot=eq; + 3 No false
    AT3G54120 ath Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G19460.1); Has 661 Blast hits to 661 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 189; Fungi - 0; Plants - 460; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).;Reticulon family protein transcript=eq;prot=eq; - 3 No false
    AT3G61560 ath Reticulon family protein; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G46170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Reticulon family protein transcript=eq;prot=eq; + 3 No false
    AT4G01230 ath Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G46170.1); Has 1116 Blast hits to 1114 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 616; Fungi - 13; Plants - 467; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).;Reticulon family protein transcript=eq;prot=eq; - 4 No false
    AT4G11220 ath VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;VIRB2-interacting protein 2 transcript=eq;prot=eq; - 4 No false
    AT4G23630 ath VIRB2-interacting protein 1 (BTI1); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1); Has 1242 Blast hits to 1240 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 705; Fungi - 11; Plants - 505; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).;VIRB2-interacting protein 1 transcript=eq;prot=eq; + 4 No false
    AT5G41600 ath VIRB2-interacting protein 3 (BTI3); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulan like protein B3 (TAIR:AT1G64090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;VIRB2-interacting protein 3 transcript=eq;prot=eq; + 5 No false
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