Selection of genes

Index of genes with 3 constraints:
  • gene family : HOM000287
  • species : mtr
  • interpro domain : IPR012337
  • The 'interpro' flag in the table indicates whether or not the gene adheres to all 3 constraints, or just to the top 2 constraints (see phylogenetic profile of the previous page.

    Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

    gene_id species description comment strand chr outlier interpro
    MT0G20650 mtr E3 ubiquitin-protein ligase RNF19A (AHRD V1 ***- P50636); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=AC233571_24.1; - AC233571.5 No false
    MT0G20660 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type transcript=eq;prot=eq;pid=AC233571_25.1; - AC233571.5 Yes false
    MT0G20680 mtr E3 ubiquitin-protein ligase RNF14 (AHRD V1 **-- Q9UBS8); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=AC233571_27.1; - AC233571.5 No false
    MT2G028870 mtr E3 ubiquitin-protein ligase RNF216 (AHRD V1 *-*- Q9NWF9); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=Medtr2g028870.1; - 2 No false
    MT2G044540 mtr E3 ubiquitin-protein ligase RNF216 (AHRD V1 ***- Q9NWF9); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=Medtr2g044540.1; + 2 No false
    MT3G035570 mtr Ubiquitin-protein ligase/ zinc ion binding protein (AHRD V1 ***- B6U4B5_MAIZE); contains Interpro domain(s) IPR001841 Zinc finger, RING-type transcript=eq;prot=eq;pid=Medtr3g035570.1; - 3 No false
    MT3G055400 mtr Predicted E3 ubiquitin ligase (AHRD V1 ***- Q2UQ22_ASPOR); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=Medtr3g055400.1; - 3 No false
    MT3G055420 mtr Ubiquitin-protein ligase/ zinc ion binding protein (AHRD V1 **-- B6U4B5_MAIZE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type transcript=eq;prot=eq;pid=Medtr3g055420.1; - 3 No false
    MT3G055430 mtr IBR finger domain-containing protein (AHRD V1 *--- C0NYX6_AJECG); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=Medtr3g055430.1; - 3 No false
    MT4G060940 mtr IBR domain containing protein (AHRD V1 ***- Q2RBQ1_ORYSJ); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=Medtr4g060940.1; - 4 No false
    MT5G006030 mtr Ubiquitin-protein ligase/ zinc ion binding protein (AHRD V1 *-*- B6SL08_MAIZE); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=Medtr5g006030.1; + 5 No false
    MT5G007660 mtr cDNA clone J033067G01 full insert sequence (AHRD V1 *-*- Q6ERQ9_ORYSJ); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=Medtr5g007660.1; - 5 No false
    MT5G007670 mtr Zinc finger protein-like protein (AHRD V1 *--- Q1PEQ5_ARATH); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=Medtr5g007670.1; - 5 No false
    MT5G062990 mtr E3 ubiquitin-protein ligase RNF19A (AHRD V1 ***- P50636); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=Medtr5g062990.1; + 5 No false
    MT5G078410 mtr E3 ubiquitin-protein ligase RNF19B (AHRD V1 *-*- Q1L8L6); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=Medtr5g078410.1; - 5 No false
    MT8G022900 mtr Zinc finger protein-like protein (AHRD V1 ***- Q1PEQ5_ARATH); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-type transcript=eq;prot=eq;pid=Medtr8g022900.1; - 8 No false
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