Selection of genes

Index of genes with 3 constraints:
  • gene family : HOM000070
  • species : mtr
  • interpro domain : IPR012337
  • The 'interpro' flag in the table indicates whether or not the gene adheres to all 3 constraints, or just to the top 2 constraints (see phylogenetic profile of the previous page.

    Page 2 of 2, showing 18 records out of 38 total, starting on record 21, ending on 38

    gene_id species description comment strand chr outlier interpro
    MT3G084380 mtr Polygalacturonase 2 (Fragment) (AHRD V1 *-** Q6RX20_FICCA); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr3g084380.1; + 3 No false
    MT4G034020 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28 transcript=eq;prot=eq;pid=Medtr4g034020.1; - 4 No false
    MT4G083660 mtr Polygalacturonase (Fragment) (AHRD V1 *-*- D2CGN6_CITUN); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr4g083660.1; + 4 No false
    MT4G084050 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28 transcript=eq;prot=eq;pid=Medtr4g084050.1; + 4 No false
    MT5G033680 mtr Polygalacturonase At1g48100 (AHRD V1 ***- Q949Z1); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr5g033680.1; - 5 No false
    MT5G034090 mtr Polygalacturonase At1g48100 (AHRD V1 ***- Q949Z1); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr5g034090.1; + 5 No false
    MT5G043350 mtr Polygalacturonase (Fragment) (AHRD V1 *-** Q8SAB4_CAPFR); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr5g043350.1; - 5 No false
    MT5G063430 mtr Polygalacturonase (Fragment) (AHRD V1 *-** Q5D4T0_PSIGU); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr5g063430.1; + 5 No false
    MT5G097860 mtr Polygalacturonase (AHRD V1 **** Q704S5_MEDTR); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28 transcript=eq;prot=eq;pid=Medtr5g097860.1; + 5 No false
    MT6G005630 mtr Polygalacturonase 1 (AHRD V1 ***- C0SPH4_PRUPE); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr6g005630.1; + 6 No false
    MT7G072360 mtr Polygalacturonase (AHRD V1 ***- Q7Y1T6_BRANA); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr7g072360.1; + 7 No false
    MT7G072370 mtr Exopolygalacturonase (Fragment) (AHRD V1 **-- P24548); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28 transcript=eq;prot=eq;pid=Medtr7g072370.1; + 7 No false
    MT7G072390 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr7g072390.1; + 7 Yes false
    MT7G110050 mtr Polygalacturonase At1g48100 (AHRD V1 ***- Q949Z1); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr7g110050.1; - 7 No false
    MT7G113910 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr7g113910.1; - 7 No false
    MT8G006500 mtr Polygalacturonase (AHRD V1 ***- O81246_CUCME); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28 transcript=eq;prot=eq;pid=Medtr8g006500.1; + 8 No false
    MT8G008700 mtr Polygalacturonase (AHRD V1 **** Q6E222_MUSAC); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr8g008700.1; + 8 No false
    MT8G077320 mtr Polygalacturonase (Fragment) (AHRD V1 *-** Q850M8_MUSAC); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr8g077320.1; - 8 No false
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