Selection of genes

Index of genes with 3 constraints:
  • gene family : HOM000070
  • species : mtr
  • interpro domain : IPR012337
  • The 'interpro' flag in the table indicates whether or not the gene adheres to all 3 constraints, or just to the top 2 constraints (see phylogenetic profile of the previous page.

    Page 1 of 2, showing 20 records out of 38 total, starting on record 1, ending on 20

    gene_id species description comment strand chr outlier interpro
    MT0G07430 mtr Polygalacturonase (AHRD V1 ***- Q68UW1_PYRCO); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=AC202489_37.1; - AC202489.12 No false
    MT1G012390 mtr Truncated PGN (AHRD V1 *-*- Q2KMJ6_SOYBN); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr1g012390.1; - 1 No false
    MT1G013730 mtr Polygalacturonase (Fragment) (AHRD V1 *-** Q5D4T0_PSIGU); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr1g013730.1; + 1 No false
    MT1G013740 mtr Polygalacturonase (Fragment) (AHRD V1 *-** Q5D4T0_PSIGU); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr1g013740.1; + 1 No false
    MT1G086390 mtr Polygalacturonase At1g48100 (AHRD V1 ***- Q949Z1); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr1g086390.1; + 1 No false
    MT1G088160 mtr Polygalacturonase (Fragment) (AHRD V1 *-*- Q2LCS3_COFAR); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr1g088160.1; - 1 No false
    MT1G116390 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr1g116390.1; + 1 Yes false
    MT2G029170 mtr Polygalacturonase (AHRD V1 ***- Q68UW1_PYRCO); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr2g029170.1; + 2 No false
    MT2G032710 mtr Polygalacturonase (Fragment) (AHRD V1 ***- Q2HZ20_SOYBN); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr2g032710.1; - 2 No false
    MT2G049400 mtr Polygalacturonase (Fragment) (AHRD V1 *-*- D2CGN6_CITUN); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr2g049400.1; + 2 No false
    MT2G058640 mtr Polygalactorunase PG11 (AHRD V1 ***- Q84TM8_MEDSA); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28 transcript=eq;prot=eq;pid=Medtr2g058640.1; - 2 No false
    MT2G058670 mtr Polygalactorunase PG11 (AHRD V1 ***- Q84TM8_MEDSA); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28 transcript=eq;prot=eq;pid=Medtr2g058670.1; - 2 No false
    MT2G058840 mtr Polygalactorunase PG11 (AHRD V1 ***- Q84TM8_MEDSA); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28 transcript=eq;prot=eq;pid=Medtr2g058840.1; + 2 No false
    MT2G060350 mtr Polygalacturonase (AHRD V1 **** Q2LAH5_SOYBN); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr2g060350.1; + 2 No false
    MT2G100040 mtr Polygalacturonase (AHRD V1 **** O82019_MEDSA); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr2g100040.1; + 2 No false
    MT2G103410 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28 transcript=eq;prot=eq;pid=Medtr2g103410.1; + 2 No false
    MT2G103650 mtr Polygalacturonase (AHRD V1 **** Q9FY19); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr2g103650.1; - 2 No false
    MT2G103830 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28 transcript=eq;prot=eq;pid=Medtr2g103830.1; + 2 Yes false
    MT3G030540 mtr Polygalacturonase (AHRD V1 **** Q2LAH5_SOYBN); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr3g030540.1; + 3 No false
    MT3G084360 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR012334 Pectin lyase fold transcript=eq;prot=eq;pid=Medtr3g084360.1; + 3 No false
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