Selection of genes

Index of genes with 3 constraints:
  • gene family : HOM002154
  • species : ath
  • interpro domain : IPR001554
  • The 'interpro' flag in the table indicates whether or not the gene adheres to all 3 constraints, or just to the top 2 constraints (see phylogenetic profile of the previous page.

    Page 1 of 1, showing 1 records out of 1 total, starting on record 1, ending on 1

    gene_id species description comment strand chr outlier interpro
    AT2G22250 ath aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 50315 Blast hits to 50311 proteins in 3104 species: Archae - 1094; Bacteria - 34657; Metazoa - 783; Fungi - 895; Plants - 1393; Viruses - 0; Other Eukaryotes - 11493 (source: NCBI BLink).;aspartate aminotransferase transcript=eq;prot=eq; - 2 No false
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