Selection of genes

Index of genes with 3 constraints:
  • gene family : HOM000213
  • species : ath
  • interpro domain : IPR001554
  • The 'interpro' flag in the table indicates whether or not the gene adheres to all 3 constraints, or just to the top 2 constraints (see phylogenetic profile of the previous page.

    Page 1 of 1, showing 15 records out of 15 total, starting on record 1, ending on 15

    gene_id species description comment strand chr outlier interpro
    AT1G66960 ath Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lupeol synthase 2 (TAIR:AT1G78960.1); Has 2121 Blast hits to 1981 proteins in 568 species: Archae - 2; Bacteria - 916; Metazoa - 134; Fungi - 247; Plants - 610; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).;Terpenoid cyclases family protein transcript=eq;prot=eq; - 1 No false
    AT1G78480 ath Prenyltransferase family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lupeol synthase 2 (TAIR:AT1G78960.1); Has 675 Blast hits to 672 proteins in 191 species: Archae - 0; Bacteria - 5; Metazoa - 65; Fungi - 169; Plants - 397; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).;Prenyltransferase family protein transcript=eq;prot=eq; - 1 No false
    AT1G78500 ath Encodes a protein with pentacyclic triterpene synthase activity. In addition to the compounds lupeol, α-amyrin and bauerenol, this enzyme was also shown to produce two seco-triterpenes: α- and β-seco-amyrin.;Terpenoid cyclases family protein transcript=eq;prot=eq; + 1 No false
    AT1G78950 ath Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).;Terpenoid cyclases family protein transcript=eq;prot=eq; - 1 No false
    AT1G78955 ath camelliol C synthase 1 (CAMS1); CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G78950.1); Has 2110 Blast hits to 1948 proteins in 563 species: Archae - 2; Bacteria - 929; Metazoa - 122; Fungi - 243; Plants - 611; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink).;camelliol C synthase 1 transcript=eq;prot=eq; - 1 No false
    AT1G78960 ath Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.;lupeol synthase 2 transcript=eq;prot=eq; + 1 No false
    AT1G78970 ath Lupeol synthase. Converts oxidosqualene to multiple triterpene alcohols and a triterpene diols. This conversion proceeds through the formation of a 17β-dammarenyl cation.;lupeol synthase 1 transcript=eq;prot=eq; + 1 No false
    AT2G07050 ath Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.;cycloartenol synthase 1 transcript=eq;prot=eq; + 2 No false
    AT3G29255 ath catalytics;intramolecular transferases; FUNCTIONS IN: catalytic activity, intramolecular transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: putative pentacyclic triterpene synthase 3 (TAIR:AT5G36150.1); Has 1945 Blast hits to 1895 proteins in 560 species: Archae - 4; Bacteria - 822; Metazoa - 89; Fungi - 228; Plants - 608; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink).;catalytics;intramolecular transferases transcript=eq;prot=eq; + 3 No false
    AT3G45130 ath lanosterol synthase 1 (LAS1); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: cycloartenol synthase 1 (TAIR:AT2G07050.1); Has 2160 Blast hits to 1916 proteins in 566 species: Archae - 4; Bacteria - 1015; Metazoa - 82; Fungi - 243; Plants - 610; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).;lanosterol synthase 1 transcript=eq;prot=eq; - 3 No false
    AT4G15340 ath Encodes a protein that catalyzes the production of the tricyclic triterpene arabidiol when expressed in yeast.;pentacyclic triterpene synthase 1 transcript=eq;prot=eq; - 4 No false
    AT4G15370 ath Encodes an oxidosqualene cyclase that primarily produces the tetracyclic triterpene baruol in vitro and when expressed in yeast. It can also make 22 other minor triterpenoid products with varying numbers of rings.;baruol synthase 1 transcript=eq;prot=eq; - 4 No false
    AT5G36150 ath putative pentacyclic triterpene synthase 3 (PEN3); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: baruol synthase 1 (TAIR:AT4G15370.1); Has 1967 Blast hits to 1902 proteins in 558 species: Archae - 4; Bacteria - 834; Metazoa - 81; Fungi - 233; Plants - 606; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink).;putative pentacyclic triterpene synthase 3 transcript=eq;prot=eq; - 5 No false
    AT5G42600 ath Encodes an oxidosqualene synthase that produces the monocyclic triterpene marneral.;marneral synthase transcript=eq;prot=eq; + 5 No false
    AT5G48010 ath Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism.;thalianol synthase 1 transcript=eq;prot=eq; + 5 No false
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