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GO term
GO:0048527
Description
lateral root development
Type
BP
GO depth
4
Number of genes
1018
 

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Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 1 of 51, showing 20 records out of 1018 total, starting on record 1, ending on 20

gene_id species description comment go evidence
AT5G11030 ath alf4-1 prevents initiation of lateral roots. Cannot be rescued by IAA. Protein belongs to a plant-specific gene family and is localized to the nucleus.;aberrant lateral root formation 4 transcript=eq;prot=eq; GO:0010102 IMP
AT4G14550 ath IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.;indole-3-acetic acid inducible 14 transcript=eq;prot=eq; GO:0010102 IMP
AT3G18485 ath Encodes a novel protein with no predicted membrane-spanning domains that is polymorphic among Arabidopsis accessions. The protein may modulate a metal transporter. Mutants are resistant to IAA-Leu, IAA-Phe, and the divalent metals cobalt and manganese but remain sensitive to free IAA; they are defective in lateral root formation and primary root elongation.;iaa-leucine resistant 2 transcript=eq;prot=eq; GO:0010102 IMP
AT4G18730 ath encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root and shoot apical meristems and in lateral root primordia. Expression in lateral root primordia is induced by auxin.;ribosomal protein L16B transcript=eq;prot=eq; GO:0010102 IEP
AT2G35510 ath Encodes a WWE domain-containing protein with 76% similarity to RCD1. The protein also contains a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.;similar to RCD one 1 transcript=eq;prot=eq; GO:0010102 IMP
AT4G33495 ath A member of the RPD gene family - there are13 annotated genes and one EST encoding RPD1-like proteins in Arabidopsis. Shows no homology to any protein of known function. Abundant expression found in the shoot apex and the root. rpd1 mutant is a temperature-sensitive mutant isolated on the basis of the impairment in adventitious roots formation in hypocotyl region. Also, disruption of the RPD1 gene by a T-DNA insertion caused embryogenesis arrest at the globular to transition stages. This phenotype is consistent with the hypothesized function of RPD1 in the maintenance of active cell proliferation.;Ubiquitin carboxyl-terminal hydrolase family protein transcript=eq;prot=eq; GO:0010102 IMP
AT3G07390 ath isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.;auxin-responsive family protein transcript=eq;prot=eq; GO:0010102 IEP
AT5G18560 ath Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression.;Integrase-type DNA-binding superfamily protein transcript=eq;prot=eq; GO:0010102 IMP
AT5G25890 ath encodes a protein that may be a negative regulator of lateral root formation in response to auxin. It is a member of IAA/ARF gene family and is plant-specific. Gain of function mutations in this gene suppresses lateral root formation and is resistant to inhibition of root elongation by auxin, cytokinin, and ethylene.;indole-3-acetic acid inducible 28 transcript=eq;prot=eq; GO:0010102 IMP
AT2G23430 ath Encodes a cyclin-dependent kinase inhibitor protein that functions as a negative regulator of cell division and promoter of endoreduplication. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Both SKP2b and RKP appear to be involved in the degradation of KRP1.;Cyclin-dependent kinase inhibitor family protein transcript=eq;prot=eq; GO:0010102 NAS
AT5G03540 ath AtEXO70A1 is a member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into nine clusters on the phylogenetic tree;exocyst subunit exo70 family protein A1 transcript=eq;prot=eq; GO:0010102 IMP
AT1G32230 ath Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.;WWE protein-protein interaction domain protein family transcript=eq;prot=eq; GO:0010102 IMP
AT2G04160 ath isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.;Subtilisin-like serine endopeptidase family protein transcript=eq;prot=eq; GO:0010102 IEP
AT4G12550 ath isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus.;Auxin-Induced in Root cultures 1 transcript=eq;prot=eq; GO:0010102 IEP
AT2G34680 ath isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.;Outer arm dynein light chain 1 protein transcript=eq;prot=eq; GO:0010102 IEP
MD00G205170 mdo transcript=eq;prot=eq;pid=MDP0000638244;tid=MDP0000638244;contig=MDC008843.241 GO:0010102 IEA
ME03805G00020 mes PACid=17991018;RNAname=cassava4.1_002117m;GeneName=cassava4.1_002117m.g;transcript=eq;prot=eq GO:0010102 ISO
ME05214G00540 mes PACid=17993857;RNAname=cassava4.1_002555m;GeneName=cassava4.1_002555m.g;transcript=eq;prot=eq GO:0010102 ISO
RC30005G00360 rco name=30005.m001271;gene=30005.t000037;note=30005.t000037;transcript=eq;prot=eq GO:0010102 ISO
PT14G16780 ptr PACid=17326027;name=POPTR_0014s16970;alias=pt035112m,eugene3.00141185,Pt-SUB1.2; transcript=eq;prot=eq;protein_id=17326027; GO:0010102 ISO
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