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GO term
GO:0048500
Description
signal recognition particle
Type
CC
GO depth
3
Number of genes
320
 

GO distribution

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Tandem/block/both gene duplicate percentage within this GO term :
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Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 1 of 16, showing 20 records out of 320 total, starting on record 1, ending on 20

gene_id species description comment go evidence
AL4G31210 aly name=fgenesh2_kg.4__2536__AT2G43640.1;pid=483476;prot=eq;tid=483476 GO:0005786 IEA
AT2G45770 ath chloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids.;signal recognition particle receptor protein, chloroplast (FTSY) transcript=eq;prot=eq; GO:0005786 ISS
AT5G66970 ath P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: Signal recognition particle, SRP54 subunit protein (TAIR:AT1G48900.2); Has 4395 Blast hits to 4395 proteins in 1809 species: Archae - 370; Bacteria - 2960; Metazoa - 150; Fungi - 154; Plants - 148; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; GO:0005786 ISS
AT1G15310 ath 54 kDa protein subunit of SRP that interacts with the signal peptide of secreted proteins;signal recognition particle 54 kDa subunit transcript=eq;prot=eq; GO:0005786 ISS
AT5G03940 ath mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit;chloroplast signal recognition particle 54 kDa subunit transcript=eq;prot=eq; GO:0005786 ISS
AT1G48900 ath Signal recognition particle, SRP54 subunit protein; FUNCTIONS IN: 7S RNA binding, mRNA binding, nucleoside-triphosphatase activity, GTP binding, nucleotide binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit (InterPro:IPR006325), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: Signal recognition particle, SRP54 subunit protein (TAIR:AT5G49500.1); Has 17579 Blast hits to 17572 proteins in 2934 species: Archae - 472; Bacteria - 10667; Metazoa - 363; Fungi - 296; Plants - 287; Viruses - 1; Other Eukaryotes - 5493 (source: NCBI BLink).;Signal recognition particle, SRP54 subunit protein transcript=eq;prot=eq; GO:0005786 ISS
AT1G48160 ath signal recognition particle 19 kDa protein, putative / SRP19, putative; FUNCTIONS IN: 7S RNA binding; INVOLVED IN: protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP19 subunit (InterPro:IPR002778); Has 500 Blast hits to 499 proteins in 236 species: Archae - 81; Bacteria - 0; Metazoa - 158; Fungi - 144; Plants - 60; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).;signal recognition particle 19 kDa protein, putative / SRP19, putative transcript=eq;prot=eq; GO:0005786 ISS
AT4G30600 ath signal recognition particle receptor alpha subunit family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, signal recognition particle binding, GTP binding, GTPase activity, nucleotide binding; INVOLVED IN: intracellular protein transport, protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: endoplasmic reticulum, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle receptor, alpha subunit, N-terminal (InterPro:IPR007222), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 16825 Blast hits to 16740 proteins in 2884 species: Archae - 472; Bacteria - 10592; Metazoa - 551; Fungi - 433; Plants - 279; Viruses - 3; Other Eukaryotes - 4495 (source: NCBI BLink).;signal recognition particle receptor alpha subunit family protein transcript=eq;prot=eq; GO:0005786 ISS
AT4G02970 ath Signal recognition particle. Type 4 of RNA polymerase III dependent genes.;7SL RNA1 transcript=eq;prot=eq; GO:0005786 ISS
AT2G43640 ath Signal recognition particle, SRP9/SRP14 subunit; FUNCTIONS IN: 7S RNA binding, endoplasmic reticulum signal peptide binding, RNA binding; INVOLVED IN: negative regulation of translational elongation, protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP14 subunit (InterPro:IPR003210), Signal recognition particle, SRP9/SRP14 subunit (InterPro:IPR009018); Has 216 Blast hits to 216 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 35; Plants - 46; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).;Signal recognition particle, SRP9/SRP14 subunit transcript=eq;prot=eq; GO:0005786 ISS
AT5G49500 ath Signal recognition particle, SRP54 subunit protein; FUNCTIONS IN: 7S RNA binding, protein binding, mRNA binding, GTP binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897), Signal recognition particle, SRP54 subunit (InterPro:IPR006325); BEST Arabidopsis thaliana protein match is: Signal recognition particle, SRP54 subunit protein (TAIR:AT1G48900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Signal recognition particle, SRP54 subunit protein transcript=eq;prot=eq; GO:0005786 ISS
BD5G22280 bdi pid=Bradi5g22280.1;tid=Bradi5g22280.1;GeneName=Bradi5g22280;transcript=eq;prot=eq GO:0005786 IEA
CP00009G03430 cpa name=evm.TU.supercontig_9.343;pid=evm.TU.supercontig_9.343;prot=eq;transcript=eq GO:0005786 IEA
CR01G06460 cre name=estExt_gwp_1H.C_10050;pid=128945;prot=eq;tid=128945;transcript=eq GO:0005786 IEA
FV0G30290 fve Signal recognition particle 14 kDa protein (SRP14) (similar to) transcript=eq;prot=eq;pid=gene14038 GO:0005786 IEA
GM10G29740 gma 10 pid=16280381;transcript=eq;prot=eq;name=Glyma10g29740.1 GO:0005786 IEA
GM12G00660 gma 12 pid=16285868;transcript=eq;prot=eq;name=Glyma12g00660.1 GO:0005786 IEA
GM09G36700 gma 09 pid=16277431;transcript=eq;prot=eq;name=Glyma09g36700.1 GO:0005786 IEA
LJ2G027930 lja partial;prot=eq;transcript=eq;scaffold=CM0304;name=chr2.CM0304.960.nc GO:0005786 IEA
LJ0G061070 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_021746;name=LjSGA_021746.1 GO:0005786 IEA
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