GO page  


GO term
GO:0048316
Description
seed development
Type
BP
GO depth
2
Number of genes
5412
 

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Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 1 of 271, showing 20 records out of 5412 total, starting on record 1, ending on 20

gene_id species description comment go evidence
AT5G09900 ath Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects.;26S proteasome regulatory subunit, putative (RPN5) transcript=eq;prot=eq; GO:0009793 NAS
AT3G10920 ath manganese superoxide dismutase (MSD1);manganese superoxide dismutase 1 transcript=eq;prot=eq; GO:0009793 IMP
AT5G27540 ath Encodes a protein with similarity to GTPases that is localized to the mitochondrion. Involved in embryogenesis, pollen tube growth and required for mitochondrial development.;MIRO-related GTP-ase 1 transcript=eq;prot=eq; GO:0009793 NAS
AT3G55620 ath embryo defective 1624 (emb1624); FUNCTIONS IN: ribosome binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF6 (InterPro:IPR002769); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF6 (TAIR:AT2G39820.1); Has 941 Blast hits to 941 proteins in 349 species: Archae - 255; Bacteria - 0; Metazoa - 235; Fungi - 146; Plants - 134; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink).;Translation initiation factor IF6 transcript=eq;prot=eq; GO:0009793 NAS
AT3G55610 ath encodes delta 1-pyrroline-5-carboxylate synthetase B. Gene expression is induced by dehydration, high salt and ABA. Knock-out mutations in P5CS2 are embryo-lethal. P5CS2 appears to be present in different cells and/or different subcellular locations from P5CS1 in a tissue-dependent manner.;delta 1-pyrroline-5-carboxylate synthase 2 transcript=eq;prot=eq; GO:0009793 IMP
AT1G69670 ath cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.;cullin 3B transcript=eq;prot=eq; GO:0009793 IGI
AT1G08260 ath Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.;DNA polymerase epsilon catalytic subunit transcript=eq;prot=eq; GO:0009793 NAS
AT3G57870 ath Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.;sumo conjugation enzyme 1 transcript=eq;prot=eq; GO:0009793 IMP
AT2G38280 ath Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage.;AMP deaminase, putative / myoadenylate deaminase, putative transcript=eq;prot=eq; GO:0009793 IMP
AT5G13790 ath AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.;AGAMOUS-like 15 transcript=eq;prot=eq; GO:0009793 IDA
AT1G55900 ath component of a translocase in the mitochondrial inner membrane;Haloacid dehalogenase-like hydrolase (HAD) superfamily protein transcript=eq;prot=eq; GO:0009793 NAS
AT5G13710 ath SMT1 controls the level of cholesterol in plants;sterol methyltransferase 1 transcript=eq;prot=eq; GO:0009793 IMP
AT4G24670 ath Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. Double mutant analyses suggest that this protein is involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling.;tryptophan aminotransferase related 2 transcript=eq;prot=eq; GO:0009793 IGI
AT4G24660 ath homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;homeobox protein 22 transcript=eq;prot=eq; GO:0009793 IMP
AT4G04350 ath EMBRYO DEFECTIVE 2369 (EMB2369); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial (InterPro:IPR002302), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.1); Has 40727 Blast hits to 36917 proteins in 3154 species: Archae - 1372; Bacteria - 23600; Metazoa - 846; Fungi - 790; Plants - 334; Viruses - 3; Other Eukaryotes - 13782 (source: NCBI BLink).;tRNA synthetase class I (I, L, M and V) family protein transcript=eq;prot=eq; GO:0009793 IMP
AT3G04400 ath embryo defective 2171 (emb2171); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT2G33370.1); Has 9322 Blast hits to 9321 proteins in 3192 species: Archae - 322; Bacteria - 5444; Metazoa - 383; Fungi - 267; Plants - 817; Viruses - 0; Other Eukaryotes - 2089 (source: NCBI BLink).;Ribosomal protein L14p/L23e family protein transcript=eq;prot=eq; GO:0009793 NAS
AT5G41480 ath Encodes a dihydrofolate synthetase based on yeast complementation experiments. This protein is involved in folate biosynthesis.;Folylpolyglutamate synthetase family protein transcript=eq;prot=eq; GO:0009793 IMP
AT5G53860 ath A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.;embryo defective 2737 transcript=eq;prot=eq; GO:0009793 NAS
AT5G27720 ath embryo defective 1644 (emb1644); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649); BEST Arabidopsis thaliana protein match is: snRNP core protein SMD3 (TAIR:AT1G76300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Small nuclear ribonucleoprotein family protein transcript=eq;prot=eq; GO:0009793 NAS
AT5G27740 ath A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.;ATPase family associated with various cellular activities (AAA) transcript=eq;prot=eq; GO:0009793 IMP
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