GO page  


GO term
GO:0042545
Description
cell wall modification
Type
BP
GO depth
3
Number of genes
2092
 

GO distribution

Genes by species
Genes by evidence tag
 
 
Tandem/block/both gene duplicate percentage within this GO term :
This page uses the Flash plugin.

Toolbox


Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 1 of 105, showing 20 records out of 2092 total, starting on record 1, ending on 20

gene_id species description comment go evidence
AT2G27380 ath Encodes an extensin like gene involved in seed germination.;extensin proline-rich 1 transcript=eq;prot=eq; GO:0009827 TAS
AT5G06700 ath Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes.;Plant protein of unknown function (DUF828) transcript=eq;prot=eq; GO:0009827 IMP
AT5G63800 ath Involved in mucilage formation. Mutants form columella and outer cell wall architecture of the mucilage cells resembles wild-type. However, mum2 seeds completely lack seed coat mucilage. This mutation appears to represent a later step in the development of this cell-type. Encodes a beta-galactosidase involved in seed coat mucilage biosynthesis. Member of Glycoside Hydrolase Family 35;Glycosyl hydrolase family 35 protein transcript=eq;prot=eq; GO:0009827 IMP
AT3G56960 ath Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.;phosphatidyl inositol monophosphate 5 kinase 4 transcript=eq;prot=eq; GO:0009827 IMP
AT5G01360 ath Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).;Plant protein of unknown function (DUF828) transcript=eq;prot=eq; GO:0009827 IMP
AT2G41210 ath Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.;phosphatidylinositol- 4-phosphate 5-kinase 5 transcript=eq;prot=eq; GO:0009827 IMP
AT4G34980 ath Serine protease similar to subtilisin.;subtilisin-like serine protease 2 transcript=eq;prot=eq; GO:0009827 TAS
AL4G28160 aly name=scaffold_402928.1;pid=903427;prot=eq;tid=934940 GO:0009827 ISO
AL5G27310 aly name=Al_scaffold_0005_2603;pid=867124;prot=eq;tid=898637 GO:0009827 ISO
MT8G095690 mtr Beta-galactosidase (AHRD V1 **** B9GU11_POPTR); contains Interpro domain(s) IPR001944 Glycoside hydrolase, family 35 transcript=eq;prot=eq;pid=Medtr8g095690.1; GO:0009827 ISO
MT3G088520 mtr Beta-galactosidase (AHRD V1 **** B9GU11_POPTR); contains Interpro domain(s) IPR001944 Glycoside hydrolase, family 35 transcript=eq;prot=eq;pid=Medtr3g088520.1; GO:0009827 ISO
GM06G12150 gma 06 pid=16262637;transcript=eq;prot=eq;name=Glyma06g12150.1 GO:0009827 ISO
MD15G026740 mdo transcript=eq;prot=eq;pid=MDP0000316304;tid=MDP0000316304;contig=MDC025843.51 GO:0009827 ISO
FV2G29930 fve Beta-galactosidase 16 (Lactase 16), Precursor (similar to) transcript=eq;prot=eq;pid=gene11229 GO:0009827 ISO
AT1G77410 ath beta-galactosidase 16 (BGAL16); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 35 protein (TAIR:AT5G63800.1); Has 2516 Blast hits to 2225 proteins in 479 species: Archae - 17; Bacteria - 1086; Metazoa - 478; Fungi - 225; Plants - 619; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).;beta-galactosidase 16 transcript=eq;prot=eq; GO:0009827 ISO
AL2G26380 aly name=fgenesh2_kg.2__2036__AT1G77410.1;pid=476906;prot=eq;tid=476906 GO:0009827 ISO
CP00064G01160 cpa name=evm.TU.supercontig_64.116;pid=evm.TU.supercontig_64.116;prot=eq;transcript=eq GO:0009827 ISO
TC08G010990 tca RNAname=Tc08_t010990;GeneName=Tc08_g010990;transcript=eq;prot=eq GO:0009827 ISO
RC29648G00940 rco name=29648.m002008;gene=29648.t000095;note=29648.t000095;transcript=eq;prot=eq GO:0009827 ISO
PT05G19140 ptr PACid=17320354;name=POPTR_0005s20280;alias=pt032289m,gw1.V.5394.1; transcript=eq;prot=eq;protein_id=17320354; GO:0009827 ISO
<< previous
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 next >>

Download genes

Include following columns
gene_id
species
description
comment
go
evidence