GO page  


GO term
GO:0031461
Description
cullin-RING ubiquitin ligase complex
Type
CC
GO depth
4
Number of genes
2025
 

GO distribution

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Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 1 of 102, showing 20 records out of 2025 total, starting on record 1, ending on 20

gene_id species description comment go evidence
AT5G25350 ath Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway.;EIN3-binding F box protein 2 transcript=eq;prot=eq; GO:0019005 IPI
AT2G39940 ath Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.;RNI-like superfamily protein transcript=eq;prot=eq; GO:0019005 IPI
AT3G21860 ath SKP1-like 10 (SK10); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 9 (TAIR:AT3G21850.1); Has 1416 Blast hits to 1412 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 530; Fungi - 179; Plants - 530; Viruses - 11; Other Eukaryotes - 166 (source: NCBI BLink).;SKP1-like 10 transcript=eq;prot=eq; GO:0019005 ISS
AT3G21840 ath SKP1-like 7 (SK7); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 8 (TAIR:AT3G21830.1); Has 1302 Blast hits to 1298 proteins in 257 species: Archae - 0; Bacteria - 0; Metazoa - 505; Fungi - 171; Plants - 493; Viruses - 7; Other Eukaryotes - 126 (source: NCBI BLink).;SKP1-like 7 transcript=eq;prot=eq; GO:0019005 ISS
AT3G21830 ath SKP1-like 8 (SK8); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 9 (TAIR:AT3G21850.1); Has 904 Blast hits to 850 proteins in 161 species: Archae - 9; Bacteria - 40; Metazoa - 431; Fungi - 54; Plants - 83; Viruses - 2; Other Eukaryotes - 285 (source: NCBI BLink).;SKP1-like 8 transcript=eq;prot=eq; GO:0019005 ISS
AT4G24210 ath F-box protein that is involved in GA signaling. Regulates seed germination. Component of E3 ubiquitin complex. Interacts with DELLA proteins.;F-box family protein transcript=eq;prot=eq; GO:0019005 IPI
AT2G45950 ath SKP1-like 20 (SK20); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: SKP1-like 21 (TAIR:AT3G61415.1); Has 1496 Blast hits to 1480 proteins in 265 species: Archae - 0; Bacteria - 13; Metazoa - 562; Fungi - 181; Plants - 479; Viruses - 9; Other Eukaryotes - 252 (source: NCBI BLink).;SKP1-like 20 transcript=eq;prot=eq; GO:0019005 ISS
AT3G61415 ath SKP1-like 21 (SK21); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: stem, fruit, root, inflorescence, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 20 (TAIR:AT2G45950.1); Has 1341 Blast hits to 1337 proteins in 268 species: Archae - 0; Bacteria - 12; Metazoa - 524; Fungi - 168; Plants - 472; Viruses - 11; Other Eukaryotes - 154 (source: NCBI BLink).;SKP1-like 21 transcript=eq;prot=eq; GO:0019005 ISS
AT2G17310 ath Encodes an F-Box protein that regulates a novel induced defense response independent of both salicylic acid and systemic acquired resistance;F-box and associated interaction domains-containing protein transcript=eq;prot=eq; GO:0019005 ISS
AT4G11260 ath Functions in plant disease resistance signaling, SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance.;phosphatase-related transcript=eq;prot=eq; GO:0019005 TAS
AT5G21040 ath Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses.;F-box protein 2 transcript=eq;prot=eq; GO:0019005 ISS
AT1G21410 ath AtSKP2;1 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes.;F-box/RNI-like superfamily protein transcript=eq;prot=eq; GO:0019005 IPI
AT2G03190 ath one of SKP1 homologs. Gene is expressed specifically in the silique.;SKP1-like 16 transcript=eq;prot=eq; GO:0019005 ISS
AT4G23570 ath Closely related to SGT1B, may function in SCF(TIR1) mediated protein degradation. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. AtSGT1a is induced upon pathogen infection and can function in R gene-mediated resistance.;phosphatase-related transcript=eq;prot=eq; GO:0019005 ISS
AT2G42620 ath The mutations at MAX2 cause increased hypocotyl and petiole elongation in light-grown seedlings. Positional cloning identifies MAX2 as a member of the F-box leucine-rich repeat family of proteins. MAX2 is identical to ORE9, a proposed regulator of leaf senescence. Involved in positive regulation of light responses.;RNI-like superfamily protein transcript=eq;prot=eq; GO:0019005 ISS
AT3G53060 ath SKP1-like 6 (SK6); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: SCF ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 5 (TAIR:AT3G60020.1); Has 1174 Blast hits to 1172 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 448; Fungi - 171; Plants - 431; Viruses - 9; Other Eukaryotes - 115 (source: NCBI BLink).;SKP1-like 6 transcript=eq;prot=eq; GO:0019005 TAS
AT1G75950 ath SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif.;S phase kinase-associated protein 1 transcript=eq;prot=eq; GO:0019005 NAS
AT1G02980 ath encodes an Arabidopsis cullin;cullin 2 transcript=eq;prot=eq; GO:0019005 ISS
AT5G42190 ath Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis.;E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein transcript=eq;prot=eq; GO:0019005 NAS
AT3G62980 ath Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.;F-box/RNI-like superfamily protein transcript=eq;prot=eq; GO:0019005 IDA
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